RNA–Protein interactions for RNA: ENST00000519295.5

AP3B1-204, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene AP3B1, Length 3,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-204ENST00000519295 SLAIN1Q8ND83 568 aa6.18□□□□□ -1.42
AP3B1-204ENST00000519295 ERP27Q96DN0 273 aa6.18□□□□□ -1.42
AP3B1-204ENST00000519295 TFCP2L1Q9NZI6 479 aa6.18□□□□□ -1.42
AP3B1-204ENST00000519295 XPO7Q9UIA9 1087 aaKnown RBP6.18□□□□□ -1.42
AP3B1-204ENST00000519295 DDX41Q9UJV9 622 aaKnown RBP6.18□□□□□ -1.42
AP3B1-204ENST00000519295 CLASP2O75122 1294 aaKnown RBP6.18□□□□□ -1.42
AP3B1-204ENST00000519295 HOXD11P31277 338 aaPredicted RBP6.18□□□□□ -1.42
AP3B1-204ENST00000519295 SART3Q15020 963 aaKnown RBP6.18□□□□□ -1.42
AP3B1-204ENST00000519295 TRAPPC3LQ5T215 181 aa6.18□□□□□ -1.42
AP3B1-204ENST00000519295 PRPF38AQ8NAV1 312 aaKnown RBP6.18□□□□□ -1.42
AP3B1-204ENST00000519295 UROC1Q96N76 676 aa6.18□□□□□ -1.42
AP3B1-204ENST00000519295 RPS6KC1Q96S38 1066 aa6.18□□□□□ -1.42
AP3B1-204ENST00000519295 PPP1R1BQ9UD71 204 aaPredicted RBP6.18□□□□□ -1.42
AP3B1-204ENST00000519295 ZMAT5Q9UDW3 170 aaKnown RBP6.18□□□□□ -1.42
AP3B1-204ENST00000519295 ATF5Q9Y2D1 282 aaPredicted RBP6.18□□□□□ -1.42
AP3B1-204ENST00000519295 TRIM66O15016 1216 aa6.18□□□□□ -1.42
AP3B1-204ENST00000519295 ITGBL1O95965 494 aaPredicted RBP6.18□□□□□ -1.42
AP3B1-204ENST00000519295 TRAF1Q13077 416 aa6.18□□□□□ -1.42
AP3B1-204ENST00000519295 IQUBQ8NA54 791 aa6.18□□□□□ -1.42
AP3B1-204ENST00000519295 MAP3K14Q99558 947 aa6.18□□□□□ -1.42
AP3B1-204ENST00000519295 PAIP2Q9BPZ3 127 aaKnown RBP6.18□□□□□ -1.42
AP3B1-204ENST00000519295 NACA2Q9H009 215 aa6.18□□□□□ -1.42
AP3B1-204ENST00000519295 ZNF69Q9UC07 566 aa6.18□□□□□ -1.42
AP3B1-204ENST00000519295 UQCRHLA0A096LP55 91 aa6.17□□□□□ -1.42
AP3B1-204ENST00000519295 PDLIM1O00151 329 aa6.17□□□□□ -1.42
AP3B1-204ENST00000519295 UQCRHP07919 91 aa6.17□□□□□ -1.42
AP3B1-204ENST00000519295 AMPHP49418 695 aa6.17□□□□□ -1.42
AP3B1-204ENST00000519295 POSTNQ15063 836 aa6.17□□□□□ -1.42
AP3B1-204ENST00000519295 PPP2R5AQ15172 486 aa6.17□□□□□ -1.42
AP3B1-204ENST00000519295 GPR162Q16538 588 aa6.17□□□□□ -1.42
AP3B1-204ENST00000519295 COBLL1Q53SF7 1204 aa6.17□□□□□ -1.42
AP3B1-204ENST00000519295 UNC5DQ6UXZ4 953 aa6.17□□□□□ -1.42
AP3B1-204ENST00000519295 SYNE3Q6ZMZ3 975 aa6.17□□□□□ -1.42
AP3B1-204ENST00000519295 KIF1BPQ96EK5 621 aa6.17□□□□□ -1.42
AP3B1-204ENST00000519295 ZSWIM6Q9HCJ5 1215 aa6.17□□□□□ -1.42
AP3B1-204ENST00000519295 KMT5AQ9NQR1 393 aa6.17□□□□□ -1.42
AP3B1-204ENST00000519295 PIM2Q9P1W9 311 aa6.17□□□□□ -1.42
AP3B1-204ENST00000519295 RIMKLBQ9ULI2 386 aa6.17□□□□□ -1.42
AP3B1-204ENST00000519295 RTCBQ9Y3I0 505 aaKnown RBP6.17□□□□□ -1.42
AP3B1-204ENST00000519295 SIPA1L1O43166 1804 aa6.17□□□□□ -1.42
AP3B1-204ENST00000519295 HDAC4P56524 1084 aa6.17□□□□□ -1.42
AP3B1-204ENST00000519295 IRX1P78414 480 aaPredicted RBP6.17□□□□□ -1.42
AP3B1-204ENST00000519295 ZCCHC8Q6NZY4 707 aaKnown RBP6.17□□□□□ -1.42
AP3B1-204ENST00000519295 VPS37AQ8NEZ2 397 aa6.17□□□□□ -1.42
AP3B1-204ENST00000519295 IRAK4Q9NWZ3 460 aa6.17□□□□□ -1.42
AP3B1-204ENST00000519295 SGSM2O43147 1006 aa6.17□□□□□ -1.42
AP3B1-204ENST00000519295 PDE6BP35913 854 aa6.17□□□□□ -1.42
AP3B1-204ENST00000519295 DHX8Q14562 1220 aaKnown RBP6.17□□□□□ -1.42
AP3B1-204ENST00000519295 MCM6Q14566 821 aa6.17□□□□□ -1.42
AP3B1-204ENST00000519295 RRS1Q15050 365 aaKnown RBP6.17□□□□□ -1.42
AP3B1-204ENST00000519295 ZNF362Q5T0B9 420 aaPredicted RBP6.17□□□□□ -1.42
AP3B1-204ENST00000519295 REM2Q8IYK8 340 aaPredicted RBP6.17□□□□□ -1.42
AP3B1-204ENST00000519295 ACSBG1Q96GR2 724 aa6.17□□□□□ -1.42
AP3B1-204ENST00000519295 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.17□□□□□ -1.42
AP3B1-204ENST00000519295 ATAD5Q96QE3 1844 aa6.17□□□□□ -1.42
AP3B1-204ENST00000519295 SGTAO43765 313 aa6.16□□□□□ -1.42
AP3B1-204ENST00000519295 DPEP1P16444 411 aa6.16□□□□□ -1.42
AP3B1-204ENST00000519295 RRM1P23921 792 aa6.16□□□□□ -1.42
AP3B1-204ENST00000519295 MAN1A1P33908 653 aa6.16□□□□□ -1.42
AP3B1-204ENST00000519295 LMNB2Q03252 620 aa6.16□□□□□ -1.42
AP3B1-204ENST00000519295 MYBPC3Q14896 1274 aa6.16□□□□□ -1.42
AP3B1-204ENST00000519295 PHOSPHO2Q8TCD6 241 aa6.16□□□□□ -1.42
AP3B1-204ENST00000519295 ASIC4Q96FT7 647 aa6.16□□□□□ -1.42
AP3B1-204ENST00000519295 CRAMP1Q96RY5 1269 aa6.16□□□□□ -1.42
AP3B1-204ENST00000519295 JRKLQ9Y4A0 524 aa6.16□□□□□ -1.42
AP3B1-204ENST00000519295 ATP9BO43861 1147 aa6.16□□□□□ -1.42
AP3B1-204ENST00000519295 TBC1D12O60347 775 aa6.16□□□□□ -1.42
AP3B1-204ENST00000519295 CEP68Q76N32 757 aa6.16□□□□□ -1.42
AP3B1-204ENST00000519295 TMC4Q7Z404 712 aa6.16□□□□□ -1.42
AP3B1-204ENST00000519295 SUDS3Q9H7L9 328 aaPredicted RBP6.16□□□□□ -1.42
AP3B1-204ENST00000519295 TRMT1Q9NXH9 659 aaKnown RBP6.16□□□□□ -1.42
AP3B1-204ENST00000519295 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.16□□□□□ -1.42
AP3B1-204ENST00000519295 HIP1RO75146 1068 aa6.16□□□□□ -1.42
AP3B1-204ENST00000519295 ALDH2P05091 517 aa6.16□□□□□ -1.42
AP3B1-204ENST00000519295 PTPROQ16827 1216 aa6.16□□□□□ -1.42
AP3B1-204ENST00000519295 ZNF34Q8IZ26 560 aa6.16□□□□□ -1.42
AP3B1-204ENST00000519295 SMYD1Q8NB12 490 aa6.16□□□□□ -1.42
AP3B1-204ENST00000519295 NOL7Q9UMY1 257 aaKnown RBP6.16□□□□□ -1.42
AP3B1-204ENST00000519295 TTF2Q9UNY4 1162 aaKnown RBP6.16□□□□□ -1.42
AP3B1-204ENST00000519295 IFRD1O00458 451 aaPredicted RBP6.16□□□□□ -1.42
AP3B1-204ENST00000519295 REC8O95072 547 aa6.16□□□□□ -1.42
AP3B1-204ENST00000519295 PRLRP16471 622 aa6.16□□□□□ -1.42
AP3B1-204ENST00000519295 LRRC31Q6UY01 552 aa6.16□□□□□ -1.42
AP3B1-204ENST00000519295 NOP9Q86U38 636 aaKnown RBP6.16□□□□□ -1.42
AP3B1-204ENST00000519295 ESX1Q8N693 406 aa6.16□□□□□ -1.42
AP3B1-204ENST00000519295 SPIRE2Q8WWL2 714 aa6.16□□□□□ -1.42
AP3B1-204ENST00000519295 GGNBP2Q9H3C7 697 aa6.16□□□□□ -1.42
AP3B1-204ENST00000519295 BIN2Q9UBW5 565 aaPredicted RBP6.16□□□□□ -1.42
AP3B1-204ENST00000519295 DOCK1Q14185 1865 aa6.16□□□□□ -1.42
AP3B1-204ENST00000519295 LTBP2Q14767 1821 aa6.15□□□□□ -1.42
AP3B1-204ENST00000519295 P4HA2O15460 535 aa6.15□□□□□ -1.42
AP3B1-204ENST00000519295 TRIM28Q13263 835 aaKnown RBP6.15□□□□□ -1.42
AP3B1-204ENST00000519295 EMC10Q5UCC4 262 aa6.15□□□□□ -1.42
AP3B1-204ENST00000519295 ADGRG2Q8IZP9 1017 aa6.15□□□□□ -1.42
AP3B1-204ENST00000519295 FBXW7Q969H0 707 aa6.15□□□□□ -1.42
AP3B1-204ENST00000519295 SH3KBP1Q96B97 665 aa6.15□□□□□ -1.42
AP3B1-204ENST00000519295 CDC5LQ99459 802 aaKnown RBP6.15□□□□□ -1.42
AP3B1-204ENST00000519295 COL11A1P12107 1806 aaPredicted RBP6.15□□□□□ -1.42
AP3B1-204ENST00000519295 A0A0G2JS52 829 aa6.15□□□□□ -1.43
AP3B1-204ENST00000519295 TMEM88BA6NKF7 163 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms