RNA–Protein interactions for RNA: ENST00000517378.1

CDH12-203, Transcript of cadherin 12, humanhuman

TSL 1 (best)

Gene CDH12, Length 2,843 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-203ENST00000517378 EFCAB8A8MWE9 144 aa7.63□□□□□ -1.19
CDH12-203ENST00000517378 FOXN1O15353 648 aa7.63□□□□□ -1.19
CDH12-203ENST00000517378 PLCD1P51178 756 aa7.63□□□□□ -1.19
CDH12-203ENST00000517378 EVA1CP58658 441 aa7.63□□□□□ -1.19
CDH12-203ENST00000517378 FMR1Q06787 632 aaKnown RBP eCLIP7.63□□□□□ -1.19
CDH12-203ENST00000517378 SEC23AQ15436 765 aa7.63□□□□□ -1.19
CDH12-203ENST00000517378 DZIP3Q86Y13 1208 aaKnown RBP7.63□□□□□ -1.19
CDH12-203ENST00000517378 NUTM2AQ8IVF1 878 aaPredicted RBP7.63□□□□□ -1.19
CDH12-203ENST00000517378 LCORLQ8N3X6 602 aa7.63□□□□□ -1.19
CDH12-203ENST00000517378 TC2NQ8N9U0 490 aa7.63□□□□□ -1.19
CDH12-203ENST00000517378 INCENPQ9NQS7 918 aa7.63□□□□□ -1.19
CDH12-203ENST00000517378 AATFQ9NY61 560 aaKnown RBP eCLIP7.63□□□□□ -1.19
CDH12-203ENST00000517378 ZHX1Q9UKY1 873 aaPredicted RBP7.63□□□□□ -1.19
CDH12-203ENST00000517378 PPP2R2CQ9Y2T4 447 aa7.63□□□□□ -1.19
CDH12-203ENST00000517378 KIAA1551Q9HCM1 1747 aa7.63□□□□□ -1.19
CDH12-203ENST00000517378 ZRANB2O95218 330 aaKnown RBP eCLIP7.63□□□□□ -1.19
CDH12-203ENST00000517378 TPM1P09493 284 aa7.63□□□□□ -1.19
CDH12-203ENST00000517378 PRR29P0C7W0 189 aa7.63□□□□□ -1.19
CDH12-203ENST00000517378 CLCN6P51797 869 aa7.63□□□□□ -1.19
CDH12-203ENST00000517378 GRIN1Q05586 938 aa7.63□□□□□ -1.19
CDH12-203ENST00000517378 BMS1Q14692 1282 aaKnown RBP7.63□□□□□ -1.19
CDH12-203ENST00000517378 TERF2Q15554 542 aa7.63□□□□□ -1.19
CDH12-203ENST00000517378 HOMER1Q86YM7 354 aa7.63□□□□□ -1.19
CDH12-203ENST00000517378 SMARCE1Q969G3 411 aa7.63□□□□□ -1.19
CDH12-203ENST00000517378 MED15Q96RN5 788 aa7.63□□□□□ -1.19
CDH12-203ENST00000517378 BAG1Q99933 345 aaPredicted RBP7.63□□□□□ -1.19
CDH12-203ENST00000517378 UTP14AQ9BVJ6 771 aaKnown RBP7.63□□□□□ -1.19
CDH12-203ENST00000517378 NFE2L3Q9Y4A8 694 aa7.63□□□□□ -1.19
CDH12-203ENST00000517378 PCDHB6Q9Y5E3 794 aa7.63□□□□□ -1.19
CDH12-203ENST00000517378 FHOD1Q9Y613 1164 aa7.63□□□□□ -1.19
CDH12-203ENST00000517378 ZNF804BA4D1E1 1349 aa7.63□□□□□ -1.19
CDH12-203ENST00000517378 COL5A3P25940 1745 aaPredicted RBP7.63□□□□□ -1.19
CDH12-203ENST00000517378 COL4A1P02462 1669 aa7.62□□□□□ -1.19
CDH12-203ENST00000517378 A0A1B0GTH6 734 aa7.62□□□□□ -1.19
CDH12-203ENST00000517378 POLR2DO15514 142 aaKnown RBP7.62□□□□□ -1.19
CDH12-203ENST00000517378 NR1I3Q14994 352 aa7.62□□□□□ -1.19
CDH12-203ENST00000517378 APTXQ7Z2E3 356 aaKnown RBP7.62□□□□□ -1.19
CDH12-203ENST00000517378 SH3RF1Q7Z6J0 888 aa7.62□□□□□ -1.19
CDH12-203ENST00000517378 ZNF654Q8IZM8 581 aa7.62□□□□□ -1.19
CDH12-203ENST00000517378 FANCBQ8NB91 859 aa7.62□□□□□ -1.19
CDH12-203ENST00000517378 PANX2Q96RD6 677 aa7.62□□□□□ -1.19
CDH12-203ENST00000517378 BCL11BQ9C0K0 894 aaPredicted RBP7.62□□□□□ -1.19
CDH12-203ENST00000517378 SERTAD1Q9UHV2 236 aa7.62□□□□□ -1.19
CDH12-203ENST00000517378 MYH13Q9UKX3 1938 aa7.62□□□□□ -1.19
CDH12-203ENST00000517378 ERICH2A1L162 156 aa7.62□□□□□ -1.19
CDH12-203ENST00000517378 SEMA3EO15041 775 aa7.62□□□□□ -1.19
CDH12-203ENST00000517378 ATP8B1O43520 1251 aa7.62□□□□□ -1.19
CDH12-203ENST00000517378 PRKAB2O43741 272 aa7.62□□□□□ -1.19
CDH12-203ENST00000517378 BMP15O95972 392 aa7.62□□□□□ -1.19
CDH12-203ENST00000517378 FGRP09769 529 aa7.62□□□□□ -1.19
CDH12-203ENST00000517378 PCP11498 1178 aaKnown RBP7.62□□□□□ -1.19
CDH12-203ENST00000517378 TDO2P48775 406 aa7.62□□□□□ -1.19
CDH12-203ENST00000517378 EIF5P55010 431 aaKnown RBP7.62□□□□□ -1.19
CDH12-203ENST00000517378 MAP3K9P80192 1104 aa7.62□□□□□ -1.19
CDH12-203ENST00000517378 PPARAQ07869 468 aa7.62□□□□□ -1.19
CDH12-203ENST00000517378 FUT2Q10981 343 aa7.62□□□□□ -1.19
CDH12-203ENST00000517378 ARHGAP29Q52LW3 1261 aa7.62□□□□□ -1.19
CDH12-203ENST00000517378 KIFC2Q96AC6 838 aa7.62□□□□□ -1.19
CDH12-203ENST00000517378 SHISA4Q96DD7 197 aa7.62□□□□□ -1.19
CDH12-203ENST00000517378 PHF20Q9BVI0 1012 aa7.62□□□□□ -1.19
CDH12-203ENST00000517378 RAI14Q9P0K7 980 aa7.62□□□□□ -1.19
CDH12-203ENST00000517378 KCNJ14Q9UNX9 436 aa7.62□□□□□ -1.19
CDH12-203ENST00000517378 SLC4A4Q9Y6R1 1079 aa7.62□□□□□ -1.19
CDH12-203ENST00000517378 COL1A1P02452 1464 aaPredicted RBP7.62□□□□□ -1.19
CDH12-203ENST00000517378 FECHP22830 423 aa7.61□□□□□ -1.19
CDH12-203ENST00000517378 PBX1P40424 430 aa7.61□□□□□ -1.19
CDH12-203ENST00000517378 NR5A1Q13285 461 aa7.61□□□□□ -1.19
CDH12-203ENST00000517378 CUL4BQ13620 913 aa7.61□□□□□ -1.19
CDH12-203ENST00000517378 NAA15Q9BXJ9 866 aaKnown RBP7.61□□□□□ -1.19
CDH12-203ENST00000517378 CSRNP2Q9H175 543 aa7.61□□□□□ -1.19
CDH12-203ENST00000517378 MRFAP1Q9Y605 127 aa7.61□□□□□ -1.19
CDH12-203ENST00000517378 PNMA6AP0CW24 399 aaPredicted RBP7.61□□□□□ -1.19
CDH12-203ENST00000517378 PKN1Q16512 942 aa7.61□□□□□ -1.19
CDH12-203ENST00000517378 PARP10Q53GL7 1025 aa7.61□□□□□ -1.19
CDH12-203ENST00000517378 SPECC1Q5M775 1068 aa7.61□□□□□ -1.19
CDH12-203ENST00000517378 CDKAL1Q5VV42 579 aa7.61□□□□□ -1.19
CDH12-203ENST00000517378 SUSD4Q5VX71 490 aa7.61□□□□□ -1.19
CDH12-203ENST00000517378 HELBQ8NG08 1087 aaPredicted RBP7.61□□□□□ -1.19
CDH12-203ENST00000517378 OXER1Q8TDS5 423 aa7.61□□□□□ -1.19
CDH12-203ENST00000517378 UBXN4Q92575 508 aa7.61□□□□□ -1.19
CDH12-203ENST00000517378 TNFRSF25Q93038 417 aa7.61□□□□□ -1.19
CDH12-203ENST00000517378 FERMT2Q96AC1 680 aa7.61□□□□□ -1.19
CDH12-203ENST00000517378 CCDC34Q96HJ3 373 aa7.61□□□□□ -1.19
CDH12-203ENST00000517378 UBXN6Q9BZV1 441 aa7.61□□□□□ -1.19
CDH12-203ENST00000517378 ARGLU1Q9NWB6 273 aaPredicted RBP7.61□□□□□ -1.19
CDH12-203ENST00000517378 PRPF3O43395 683 aaKnown RBP7.6□□□□□ -1.19
CDH12-203ENST00000517378 CCDC152Q4G0S7 254 aa7.6□□□□□ -1.19
CDH12-203ENST00000517378 TAF3Q5VWG9 929 aa7.6□□□□□ -1.19
CDH12-203ENST00000517378 RSRC2Q7L4I2 434 aaKnown RBP7.6□□□□□ -1.19
CDH12-203ENST00000517378 ESR2Q92731 530 aa7.6□□□□□ -1.19
CDH12-203ENST00000517378 SYTL4Q96C24 671 aaPredicted RBP7.6□□□□□ -1.19
CDH12-203ENST00000517378 GSDMAQ96QA5 445 aa7.6□□□□□ -1.19
CDH12-203ENST00000517378 UBAC1Q9BSL1 405 aa7.6□□□□□ -1.19
CDH12-203ENST00000517378 SEC31BQ9NQW1 1179 aa7.6□□□□□ -1.19
CDH12-203ENST00000517378 RBM28Q9NW13 759 aaKnown RBP7.6□□□□□ -1.19
CDH12-203ENST00000517378 BAZ2AQ9UIF9 1905 aaKnown RBP7.6□□□□□ -1.19
CDH12-203ENST00000517378 TNKSO95271 1327 aa7.6□□□□□ -1.19
CDH12-203ENST00000517378 ITIH6Q6UXX5 1313 aa7.6□□□□□ -1.19
CDH12-203ENST00000517378 NRAPQ86VF7 1730 aa7.6□□□□□ -1.19
CDH12-203ENST00000517378 A0A087X0B3 334 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms