RNA–Protein interactions for RNA: ENST00000502404.5

UBE2D3-211, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4 BASIC

Gene UBE2D3, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-211ENST00000502404 MOGSQ13724 837 aa13.7□□□□□ -0.22
UBE2D3-211ENST00000502404 GPAT2Q6NUI2 795 aa13.7□□□□□ -0.22
UBE2D3-211ENST00000502404 SMCR8Q8TEV9 937 aaPredicted RBP13.7□□□□□ -0.22
UBE2D3-211ENST00000502404 TBC1D2Q9BYX2 928 aa13.7□□□□□ -0.22
UBE2D3-211ENST00000502404 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.7□□□□□ -0.22
UBE2D3-211ENST00000502404 PNMA3Q9UL41 463 aa13.7□□□□□ -0.22
UBE2D3-211ENST00000502404 ADGRA2Q96PE1 1338 aa13.69□□□□□ -0.22
UBE2D3-211ENST00000502404 GJB1P08034 283 aa13.69□□□□□ -0.22
UBE2D3-211ENST00000502404 CYP2C8P10632 490 aa13.69□□□□□ -0.22
UBE2D3-211ENST00000502404 BCRP11274 1271 aa13.69□□□□□ -0.22
UBE2D3-211ENST00000502404 PRKCSHP14314 528 aaPredicted RBP13.69□□□□□ -0.22
UBE2D3-211ENST00000502404 EMP3P54852 163 aa13.69□□□□□ -0.22
UBE2D3-211ENST00000502404 PABPC4Q13310 644 aaKnown RBP eCLIP13.69□□□□□ -0.224e-7■■■■□ 24.1
UBE2D3-211ENST00000502404 SPATA5Q8NB90 893 aa13.69□□□□□ -0.22
UBE2D3-211ENST00000502404 HTATIP2Q9BUP3 242 aa13.69□□□□□ -0.22
UBE2D3-211ENST00000502404 ADAM33Q9BZ11 813 aa13.69□□□□□ -0.22
UBE2D3-211ENST00000502404 RNF208Q9H0X6 261 aa13.69□□□□□ -0.22
UBE2D3-211ENST00000502404 OSBPL5Q9H0X9 879 aaPredicted RBP13.69□□□□□ -0.22
UBE2D3-211ENST00000502404 RAI14Q9P0K7 980 aa13.69□□□□□ -0.22
UBE2D3-211ENST00000502404 DDTLA6NHG4 134 aaPredicted RBP13.68□□□□□ -0.22
UBE2D3-211ENST00000502404 BAG3O95817 575 aa13.68□□□□□ -0.22
UBE2D3-211ENST00000502404 CCL5P13501 91 aa13.68□□□□□ -0.22
UBE2D3-211ENST00000502404 ATF7IPQ6VMQ6 1270 aa13.68□□□□□ -0.22
UBE2D3-211ENST00000502404 SH3BP5LQ7L8J4 393 aa13.68□□□□□ -0.22
UBE2D3-211ENST00000502404 DPF3Q92784 378 aa13.68□□□□□ -0.22
UBE2D3-211ENST00000502404 FRAT1Q92837 279 aaPredicted RBP13.68□□□□□ -0.22
UBE2D3-211ENST00000502404 MARVELD3Q96A59 401 aa13.68□□□□□ -0.22
UBE2D3-211ENST00000502404 HMG20BQ9P0W2 317 aa13.68□□□□□ -0.22
UBE2D3-211ENST00000502404 LRP2BPQ9P2M1 347 aa13.68□□□□□ -0.22
UBE2D3-211ENST00000502404 ATRNL1Q5VV63 1379 aa13.68□□□□□ -0.22
UBE2D3-211ENST00000502404 TRIM75PA6NK02 468 aa13.67□□□□□ -0.22
UBE2D3-211ENST00000502404 TNPO2O14787 897 aaKnown RBP13.67□□□□□ -0.22
UBE2D3-211ENST00000502404 IGSF3O75054 1194 aa13.67□□□□□ -0.22
UBE2D3-211ENST00000502404 CTGFP29279 349 aa13.67□□□□□ -0.22
UBE2D3-211ENST00000502404 GJA8P48165 433 aa13.67□□□□□ -0.22
UBE2D3-211ENST00000502404 PRKCZQ05513 592 aa13.67□□□□□ -0.22
UBE2D3-211ENST00000502404 MTFR1Q15390 333 aa13.67□□□□□ -0.22
UBE2D3-211ENST00000502404 COA7Q96BR5 231 aa13.67□□□□□ -0.22
UBE2D3-211ENST00000502404 DDX4Q9NQI0 724 aaKnown RBP13.67□□□□□ -0.22
UBE2D3-211ENST00000502404 AGTPBP1Q9UPW5 1226 aa13.67□□□□□ -0.22
UBE2D3-211ENST00000502404 MYH2Q9UKX2 1941 aa13.66□□□□□ -0.22
UBE2D3-211ENST00000502404 ADCY3O60266 1144 aa13.66□□□□□ -0.22
UBE2D3-211ENST00000502404 ARID4AP29374 1257 aaPredicted RBP13.66□□□□□ -0.22
UBE2D3-211ENST00000502404 GCLCP48506 637 aaPredicted RBP13.66□□□□□ -0.22
UBE2D3-211ENST00000502404 RHBDL3P58872 404 aa13.66□□□□□ -0.22
UBE2D3-211ENST00000502404 OS9Q13438 667 aaPredicted RBP13.66□□□□□ -0.22
UBE2D3-211ENST00000502404 TSR1Q2NL82 804 aaKnown RBP13.66□□□□□ -0.22
UBE2D3-211ENST00000502404 CCDC158Q5M9N0 1113 aa13.66□□□□□ -0.22
UBE2D3-211ENST00000502404 TEX11Q8IYF3 940 aa13.66□□□□□ -0.22
UBE2D3-211ENST00000502404 PROCA1Q8NCQ7 364 aaPredicted RBP13.66□□□□□ -0.22
UBE2D3-211ENST00000502404 PXYLP1Q8TE99 480 aa13.66□□□□□ -0.22
UBE2D3-211ENST00000502404 NSUN4Q96CB9 384 aaKnown RBP13.66□□□□□ -0.22
UBE2D3-211ENST00000502404 DHX36Q9H2U1 1008 aaKnown RBP13.66□□□□□ -0.22
UBE2D3-211ENST00000502404 AS3MTQ9HBK9 375 aa13.66□□□□□ -0.22
UBE2D3-211ENST00000502404 HERC5Q9UII4 1024 aaKnown RBP13.66□□□□□ -0.22
UBE2D3-211ENST00000502404 NR2E3Q9Y5X4 410 aa13.66□□□□□ -0.22
UBE2D3-211ENST00000502404 RFX7Q2KHR2 1363 aa13.66□□□□□ -0.22
UBE2D3-211ENST00000502404 H0YGN5 161 aa13.65□□□□□ -0.22
UBE2D3-211ENST00000502404 ZMYND10O75800 440 aa13.65□□□□□ -0.22
UBE2D3-211ENST00000502404 TRIM27P14373 513 aa13.65□□□□□ -0.22
UBE2D3-211ENST00000502404 FLT3LGP49771 235 aa13.65□□□□□ -0.22
UBE2D3-211ENST00000502404 SPP2Q13103 211 aa13.65□□□□□ -0.22
UBE2D3-211ENST00000502404 PTGDRQ13258 359 aa13.65□□□□□ -0.22
UBE2D3-211ENST00000502404 IRF5Q13568 498 aa13.65□□□□□ -0.22
UBE2D3-211ENST00000502404 TTC39AQ5SRH9 613 aa13.65□□□□□ -0.22
UBE2D3-211ENST00000502404 VARS2Q5ST30 1063 aaKnown RBP13.65□□□□□ -0.22
UBE2D3-211ENST00000502404 C6orf132Q5T0Z8 1188 aa13.65□□□□□ -0.22
UBE2D3-211ENST00000502404 ZNF280CQ8ND82 737 aa13.65□□□□□ -0.22
UBE2D3-211ENST00000502404 TRIM34Q9BYJ4 488 aa13.65□□□□□ -0.22
UBE2D3-211ENST00000502404 CDHR5Q9HBB8 845 aa13.65□□□□□ -0.22
UBE2D3-211ENST00000502404 GPR108Q9NPR9 543 aa13.65□□□□□ -0.22
UBE2D3-211ENST00000502404 PI4KBQ9UBF8 816 aa13.65□□□□□ -0.22
UBE2D3-211ENST00000502404 CENPFP49454 3210 aa13.65□□□□□ -0.22
UBE2D3-211ENST00000502404 USP17L5A8MUK1 530 aa13.64□□□□□ -0.23
UBE2D3-211ENST00000502404 ZKSCAN2Q63HK3 967 aa13.64□□□□□ -0.23
UBE2D3-211ENST00000502404 NAA16Q6N069 864 aaPredicted RBP13.64□□□□□ -0.23
UBE2D3-211ENST00000502404 TBC1D9Q6ZT07 1266 aa13.64□□□□□ -0.23
UBE2D3-211ENST00000502404 COL2A1P02458 1487 aaPredicted RBP13.63□□□□□ -0.23
UBE2D3-211ENST00000502404 SGPL1O95470 568 aa13.63□□□□□ -0.23
UBE2D3-211ENST00000502404 TFRCP02786 760 aaKnown RBP13.63□□□□□ -0.23
UBE2D3-211ENST00000502404 CAP2P40123 477 aa13.63□□□□□ -0.23
UBE2D3-211ENST00000502404 FAM110CQ1W6H9 321 aa13.63□□□□□ -0.23
UBE2D3-211ENST00000502404 FOXP4Q8IVH2 680 aaPredicted RBP13.63□□□□□ -0.23
UBE2D3-211ENST00000502404 ANKRD13CQ8N6S4 541 aa13.63□□□□□ -0.23
UBE2D3-211ENST00000502404 U2AF1L4Q8WU68 220 aaKnown RBP13.63□□□□□ -0.23
UBE2D3-211ENST00000502404 CLUAP1Q96AJ1 413 aa13.63□□□□□ -0.23
UBE2D3-211ENST00000502404 NPDC1Q9NQX5 325 aaPredicted RBP13.63□□□□□ -0.23
UBE2D3-211ENST00000502404 GINM1Q9NU53 330 aa13.63□□□□□ -0.23
UBE2D3-211ENST00000502404 GABRQQ9UN88 632 aa13.63□□□□□ -0.23
UBE2D3-211ENST00000502404 DOCK2Q92608 1830 aa13.62□□□□□ -0.23
UBE2D3-211ENST00000502404 MKI67P46013 3256 aaKnown RBP13.62□□□□□ -0.23
UBE2D3-211ENST00000502404 PNMA6EA0A0J9YXQ4 647 aa13.62□□□□□ -0.23
UBE2D3-211ENST00000502404 BCAR3O75815 825 aa13.62□□□□□ -0.23
UBE2D3-211ENST00000502404 FARP2O94887 1054 aaPredicted RBP13.62□□□□□ -0.23
UBE2D3-211ENST00000502404 ASNSP08243 561 aa13.62□□□□□ -0.23
UBE2D3-211ENST00000502404 MCAMP43121 646 aa13.62□□□□□ -0.23
UBE2D3-211ENST00000502404 PI16Q6UXB8 463 aa13.62□□□□□ -0.23
UBE2D3-211ENST00000502404 CERS3Q8IU89 383 aa13.62□□□□□ -0.23
UBE2D3-211ENST00000502404 SHISA4Q96DD7 197 aa13.62□□□□□ -0.23
UBE2D3-211ENST00000502404 UNC93B1Q9H1C4 597 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms