RNA–Protein interactions for RNA: ENST00000474833.5

PCCB-212, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 5

Gene PCCB, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-212ENST00000474833 ZKSCAN1P17029 563 aaPredicted RBP18.25■□□□□ 0.51
PCCB-212ENST00000474833 IRX3P78415 501 aaPredicted RBP18.25■□□□□ 0.51
PCCB-212ENST00000474833 ERICH6Q7L0X2 663 aa18.25■□□□□ 0.51
PCCB-212ENST00000474833 TRMT2AQ8IZ69 625 aaKnown RBP18.25■□□□□ 0.51
PCCB-212ENST00000474833 GPRC5AQ8NFJ5 357 aa18.25■□□□□ 0.51
PCCB-212ENST00000474833 XAGE2Q96GT9 111 aa18.25■□□□□ 0.51
PCCB-212ENST00000474833 HERC5Q9UII4 1024 aaKnown RBP18.25■□□□□ 0.51
PCCB-212ENST00000474833 Q3C1V9 767 aa18.24■□□□□ 0.51
PCCB-212ENST00000474833 TBC1D9Q6ZT07 1266 aa18.24■□□□□ 0.51
PCCB-212ENST00000474833 AS3MTQ9HBK9 375 aa18.24■□□□□ 0.51
PCCB-212ENST00000474833 FOCADQ5VW36 1801 aa18.23■□□□□ 0.51
PCCB-212ENST00000474833 CT47B1P0C2W7 299 aaPredicted RBP18.23■□□□□ 0.51
PCCB-212ENST00000474833 MAPK4P31152 587 aa18.23■□□□□ 0.51
PCCB-212ENST00000474833 ERVK-9P63128 1117 aa18.23■□□□□ 0.51
PCCB-212ENST00000474833 ERVK-24P63145 666 aa18.23■□□□□ 0.51
PCCB-212ENST00000474833 ALDH1L2Q3SY69 923 aa18.23■□□□□ 0.51
PCCB-212ENST00000474833 GPR142Q7Z601 462 aa18.23■□□□□ 0.51
PCCB-212ENST00000474833 METTL16Q86W50 562 aaKnown RBP18.23■□□□□ 0.51
PCCB-212ENST00000474833 TRMT44Q8IYL2 757 aaKnown RBP18.23■□□□□ 0.51
PCCB-212ENST00000474833 CDCA7LQ96GN5 454 aa18.23■□□□□ 0.51
PCCB-212ENST00000474833 FAM161BQ96MY7 647 aa18.23■□□□□ 0.51
PCCB-212ENST00000474833 APBA2Q99767 749 aa18.23■□□□□ 0.51
PCCB-212ENST00000474833 TFCP2Q12800 502 aa18.22■□□□□ 0.51
PCCB-212ENST00000474833 MVPQ14764 893 aaKnown RBP18.22■□□□□ 0.51
PCCB-212ENST00000474833 SH3RF3Q8TEJ3 882 aaPredicted RBP18.22■□□□□ 0.51
PCCB-212ENST00000474833 ASNSP08243 561 aa18.21■□□□□ 0.51
PCCB-212ENST00000474833 RGS2P41220 211 aa18.21■□□□□ 0.51
PCCB-212ENST00000474833 PDE3AQ14432 1141 aa18.21■□□□□ 0.51
PCCB-212ENST00000474833 TEX11Q8IYF3 940 aa18.21■□□□□ 0.51
PCCB-212ENST00000474833 SPATA5Q8NB90 893 aa18.21■□□□□ 0.51
PCCB-212ENST00000474833 MEIS3Q99687 375 aa18.21■□□□□ 0.51
PCCB-212ENST00000474833 TMOD4Q9NZQ9 345 aa18.21■□□□□ 0.51
PCCB-212ENST00000474833 FLRT1Q9NZU1 646 aa18.21■□□□□ 0.51
PCCB-212ENST00000474833 PI4KBQ9UBF8 816 aa18.21■□□□□ 0.51
PCCB-212ENST00000474833 CNMDO75829 334 aa18.2■□□□□ 0.5
PCCB-212ENST00000474833 ARID4AP29374 1257 aaPredicted RBP18.2■□□□□ 0.5
PCCB-212ENST00000474833 GSTO1P78417 241 aa18.2■□□□□ 0.5
PCCB-212ENST00000474833 PLEKHH3Q7Z736 793 aa18.2■□□□□ 0.5
PCCB-212ENST00000474833 EMILIN3Q9NT22 766 aa18.2■□□□□ 0.5
PCCB-212ENST00000474833 C19orf81C9J6K1 198 aa18.19■□□□□ 0.5
PCCB-212ENST00000474833 IGHA2P01877 340 aa18.19■□□□□ 0.5
PCCB-212ENST00000474833 LDHCP07864 332 aa18.19■□□□□ 0.5
PCCB-212ENST00000474833 MCAMP43121 646 aa18.19■□□□□ 0.5
PCCB-212ENST00000474833 CDX2Q99626 313 aaPredicted RBP18.19■□□□□ 0.5
PCCB-212ENST00000474833 PAGR1Q9BTK6 254 aa18.19■□□□□ 0.5
PCCB-212ENST00000474833 ZBTB21Q9ULJ3 1066 aa18.19■□□□□ 0.5
PCCB-212ENST00000474833 RLFQ13129 1914 aa18.19■□□□□ 0.5
PCCB-212ENST00000474833 FLT1P17948 1338 aa18.19■□□□□ 0.5
PCCB-212ENST00000474833 USP17L10C9JJH3 530 aa18.18■□□□□ 0.5
PCCB-212ENST00000474833 GDF11O95390 407 aa18.18■□□□□ 0.5
PCCB-212ENST00000474833 MAP2K5Q13163 448 aa18.18■□□□□ 0.5
PCCB-212ENST00000474833 ADGRA1Q86SQ6 560 aa18.18■□□□□ 0.5
PCCB-212ENST00000474833 SENP6Q9GZR1 1112 aaPredicted RBP18.18■□□□□ 0.5
PCCB-212ENST00000474833 DHX36Q9H2U1 1008 aaKnown RBP18.18■□□□□ 0.5
PCCB-212ENST00000474833 SMC4Q9NTJ3 1288 aa18.18■□□□□ 0.5
PCCB-212ENST00000474833 RAI14Q9P0K7 980 aa18.18■□□□□ 0.5
PCCB-212ENST00000474833 MTX1Q13505 466 aa18.17■□□□□ 0.5
PCCB-212ENST00000474833 TRPV1Q8NER1 839 aa18.17■□□□□ 0.5
PCCB-212ENST00000474833 GTF3C2Q8WUA4 911 aaPredicted RBP18.17■□□□□ 0.5
PCCB-212ENST00000474833 DDX20Q9UHI6 824 aaKnown RBP18.17■□□□□ 0.5
PCCB-212ENST00000474833 AKAP2Q9Y2D5 859 aa18.17■□□□□ 0.5
PCCB-212ENST00000474833 CHD9Q3L8U1 2897 aa18.16■□□□□ 0.5
PCCB-212ENST00000474833 ATN1P54259 1190 aaPredicted RBP18.16■□□□□ 0.5
PCCB-212ENST00000474833 C9orf50Q5SZB4 431 aa18.16■□□□□ 0.5
PCCB-212ENST00000474833 ZNF697Q5TEC3 545 aa18.16■□□□□ 0.5
PCCB-212ENST00000474833 DIEXFQ68CQ4 756 aaKnown RBP18.16■□□□□ 0.5
PCCB-212ENST00000474833 MAPKAPK5Q8IW41 473 aa18.16■□□□□ 0.5
PCCB-212ENST00000474833 C12orf42Q96LP6 360 aa18.16■□□□□ 0.5
PCCB-212ENST00000474833 LBHD1Q9BQE6 289 aaPredicted RBP18.16■□□□□ 0.5
PCCB-212ENST00000474833 AATFQ9NY61 560 aaKnown RBP eCLIP18.16■□□□□ 0.5
PCCB-212ENST00000474833 NDUFB9Q9Y6M9 179 aa18.16■□□□□ 0.5
PCCB-212ENST00000474833 ZNF236Q9UL36 1845 aa18.15■□□□□ 0.5
PCCB-212ENST00000474833 DNM1LO00429 736 aa18.15■□□□□ 0.5
PCCB-212ENST00000474833 SRGAP3O43295 1099 aa18.15■□□□□ 0.5
PCCB-212ENST00000474833 HOXC6P09630 235 aa18.15■□□□□ 0.5
PCCB-212ENST00000474833 RTP1P59025 263 aa18.15■□□□□ 0.5
PCCB-212ENST00000474833 PPP4CP60510 307 aa18.15■□□□□ 0.5
PCCB-212ENST00000474833 SHHQ15465 462 aa18.15■□□□□ 0.5
PCCB-212ENST00000474833 MAFAQ8NHW3 353 aaPredicted RBP18.15■□□□□ 0.5
PCCB-212ENST00000474833 TGFBRAP1Q8WUH2 860 aa18.15■□□□□ 0.5
PCCB-212ENST00000474833 LPAR1Q92633 364 aa18.15■□□□□ 0.5
PCCB-212ENST00000474833 NEUROD6Q96NK8 337 aa18.15■□□□□ 0.5
PCCB-212ENST00000474833 TTYH1Q9H313 450 aaPredicted RBP18.15■□□□□ 0.5
PCCB-212ENST00000474833 GINM1Q9NU53 330 aa18.15■□□□□ 0.5
PCCB-212ENST00000474833 PALD1Q9ULE6 856 aa18.15■□□□□ 0.5
PCCB-212ENST00000474833 GRB14Q14449 540 aa18.14■□□□□ 0.49
PCCB-212ENST00000474833 EDC3Q96F86 508 aaKnown RBP18.14■□□□□ 0.49
PCCB-212ENST00000474833 SEMA6BQ9H3T3 888 aa18.14■□□□□ 0.49
PCCB-212ENST00000474833 PRDM6Q9NQX0 595 aa18.14■□□□□ 0.49
PCCB-212ENST00000474833 NOB1Q9ULX3 412 aaKnown RBP18.14■□□□□ 0.49
PCCB-212ENST00000474833 RABGAP1Q9Y3P9 1069 aa18.14■□□□□ 0.49
PCCB-212ENST00000474833 MYO5AQ9Y4I1 1855 aaKnown RBP18.14■□□□□ 0.49
PCCB-212ENST00000474833 CYBAP13498 195 aa18.13■□□□□ 0.49
PCCB-212ENST00000474833 PTPREP23469 700 aa18.13■□□□□ 0.49
PCCB-212ENST00000474833 CYP2C19P33261 490 aa18.13■□□□□ 0.49
PCCB-212ENST00000474833 SNX17Q15036 470 aa18.13■□□□□ 0.49
PCCB-212ENST00000474833 MFSD14CQ5VZR4 134 aa18.13■□□□□ 0.49
PCCB-212ENST00000474833 USP17L2Q6R6M4 530 aa18.13■□□□□ 0.49
PCCB-212ENST00000474833 FOXP4Q8IVH2 680 aaPredicted RBP18.13■□□□□ 0.49
PCCB-212ENST00000474833 NPLOC4Q8TAT6 608 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms