RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 SPATA5Q8NB90 893 aa13.39□□□□□ -0.27
CBX3-205ENST00000462165 SOCS4Q8WXH5 440 aa13.39□□□□□ -0.27
CBX3-205ENST00000462165 NEUROD6Q96NK8 337 aa13.39□□□□□ -0.27
CBX3-205ENST00000462165 NUDT12Q9BQG2 462 aa13.39□□□□□ -0.27
CBX3-205ENST00000462165 RAI14Q9P0K7 980 aa13.39□□□□□ -0.27
CBX3-205ENST00000462165 PI4KBQ9UBF8 816 aa13.39□□□□□ -0.27
CBX3-205ENST00000462165 MYO5AQ9Y4I1 1855 aaKnown RBP13.38□□□□□ -0.27
CBX3-205ENST00000462165 ASNSP08243 561 aa13.38□□□□□ -0.27
CBX3-205ENST00000462165 GNAI3P08754 354 aa13.38□□□□□ -0.27
CBX3-205ENST00000462165 PRKAR2AP13861 404 aaKnown RBP13.38□□□□□ -0.27
CBX3-205ENST00000462165 HERVK_113P62684 666 aa13.38□□□□□ -0.27
CBX3-205ENST00000462165 MTMR2Q13614 643 aa13.38□□□□□ -0.27
CBX3-205ENST00000462165 TRMT44Q8IYL2 757 aaKnown RBP13.38□□□□□ -0.27
CBX3-205ENST00000462165 CDCA7LQ96GN5 454 aa13.38□□□□□ -0.27
CBX3-205ENST00000462165 P2RX7Q99572 595 aaKnown RBP13.38□□□□□ -0.27
CBX3-205ENST00000462165 DHX36Q9H2U1 1008 aaKnown RBP13.38□□□□□ -0.27
CBX3-205ENST00000462165 TMOD4Q9NZQ9 345 aa13.38□□□□□ -0.27
CBX3-205ENST00000462165 STXBP5LQ9Y2K9 1186 aa13.38□□□□□ -0.27
CBX3-205ENST00000462165 CUL9Q8IWT3 2517 aa13.37□□□□□ -0.27
CBX3-205ENST00000462165 ZNF316A6NFI3 1004 aaPredicted RBP13.37□□□□□ -0.27
CBX3-205ENST00000462165 C19orf81C9J6K1 198 aa13.37□□□□□ -0.27
CBX3-205ENST00000462165 COL6A1P12109 1028 aa13.37□□□□□ -0.27
CBX3-205ENST00000462165 MAPK4P31152 587 aa13.37□□□□□ -0.27
CBX3-205ENST00000462165 MCAMP43121 646 aa13.37□□□□□ -0.27
CBX3-205ENST00000462165 GORABQ5T7V8 394 aa13.37□□□□□ -0.27
CBX3-205ENST00000462165 Q7L0L9 218 aa13.37□□□□□ -0.27
CBX3-205ENST00000462165 GPRC5AQ8NFJ5 357 aa13.37□□□□□ -0.27
CBX3-205ENST00000462165 SH3RF3Q8TEJ3 882 aaPredicted RBP13.37□□□□□ -0.27
CBX3-205ENST00000462165 USP6NLQ92738 828 aa13.37□□□□□ -0.27
CBX3-205ENST00000462165 UBE2OQ9C0C9 1292 aaKnown RBP13.37□□□□□ -0.27
CBX3-205ENST00000462165 TXNRD2Q9NNW7 524 aa13.37□□□□□ -0.27
CBX3-205ENST00000462165 GINM1Q9NU53 330 aa13.37□□□□□ -0.27
CBX3-205ENST00000462165 MTMR10Q9NXD2 777 aa13.37□□□□□ -0.27
CBX3-205ENST00000462165 USP17L10C9JJH3 530 aa13.36□□□□□ -0.27
CBX3-205ENST00000462165 PEX10O60683 326 aa13.36□□□□□ -0.27
CBX3-205ENST00000462165 ERVK-9P63128 1117 aa13.36□□□□□ -0.27
CBX3-205ENST00000462165 ERVK-24P63145 666 aa13.36□□□□□ -0.27
CBX3-205ENST00000462165 CACNB2Q08289 660 aaPredicted RBP13.36□□□□□ -0.27
CBX3-205ENST00000462165 METTL16Q86W50 562 aaKnown RBP13.36□□□□□ -0.27
CBX3-205ENST00000462165 GTF3C2Q8WUA4 911 aaPredicted RBP13.36□□□□□ -0.27
CBX3-205ENST00000462165 NOL10Q9BSC4 688 aaKnown RBP13.36□□□□□ -0.27
CBX3-205ENST00000462165 DNAJC18Q9H819 358 aa13.36□□□□□ -0.27
CBX3-205ENST00000462165 RBPJLQ9UBG7 517 aa13.36□□□□□ -0.27
CBX3-205ENST00000462165 MYH1P12882 1939 aa13.35□□□□□ -0.27
CBX3-205ENST00000462165 BAG3O95817 575 aa13.35□□□□□ -0.27
CBX3-205ENST00000462165 UQCRFS1P1P0C7P4 283 aa13.35□□□□□ -0.27
CBX3-205ENST00000462165 PLCG2P16885 1265 aa13.35□□□□□ -0.27
CBX3-205ENST00000462165 ZKSCAN1P17029 563 aaPredicted RBP13.35□□□□□ -0.27
CBX3-205ENST00000462165 PPP4CP60510 307 aa13.35□□□□□ -0.27
CBX3-205ENST00000462165 JAG1P78504 1218 aa13.35□□□□□ -0.27
CBX3-205ENST00000462165 PDE3AQ14432 1141 aa13.35□□□□□ -0.27
CBX3-205ENST00000462165 Q3C1V9 767 aa13.35□□□□□ -0.27
CBX3-205ENST00000462165 MORN1Q5T089 497 aa13.35□□□□□ -0.27
CBX3-205ENST00000462165 LHX8Q68G74 356 aa13.35□□□□□ -0.27
CBX3-205ENST00000462165 GPR142Q7Z601 462 aa13.35□□□□□ -0.27
CBX3-205ENST00000462165 FOXP4Q8IVH2 680 aaPredicted RBP13.35□□□□□ -0.27
CBX3-205ENST00000462165 AATFQ9NY61 560 aaKnown RBP eCLIP13.35□□□□□ -0.27
CBX3-205ENST00000462165 LRP2BPQ9P2M1 347 aa13.35□□□□□ -0.27
CBX3-205ENST00000462165 FLT1P17948 1338 aa13.35□□□□□ -0.27
CBX3-205ENST00000462165 RGS2P41220 211 aa13.34□□□□□ -0.27
CBX3-205ENST00000462165 LRRC26Q2I0M4 334 aa13.34□□□□□ -0.27
CBX3-205ENST00000462165 NAA16Q6N069 864 aaPredicted RBP13.34□□□□□ -0.27
CBX3-205ENST00000462165 PLEKHH3Q7Z736 793 aa13.34□□□□□ -0.27
CBX3-205ENST00000462165 TGFBRAP1Q8WUH2 860 aa13.34□□□□□ -0.27
CBX3-205ENST00000462165 ARHGAP45Q92619 1136 aa13.34□□□□□ -0.27
CBX3-205ENST00000462165 PORCNQ9H237 461 aa13.34□□□□□ -0.27
CBX3-205ENST00000462165 ZBTB21Q9ULJ3 1066 aa13.34□□□□□ -0.27
CBX3-205ENST00000462165 PRUNE2Q8WUY3 3088 aa13.33□□□□□ -0.28
CBX3-205ENST00000462165 GDF11O95390 407 aa13.33□□□□□ -0.28
CBX3-205ENST00000462165 CCND3P30281 292 aaPredicted RBP13.33□□□□□ -0.28
CBX3-205ENST00000462165 RARSP54136 660 aaKnown RBP13.33□□□□□ -0.28
CBX3-205ENST00000462165 G3BP1Q13283 466 aaKnown RBP eCLIP13.33□□□□□ -0.28
CBX3-205ENST00000462165 CCL14Q16627 93 aa13.33□□□□□ -0.28
CBX3-205ENST00000462165 SHROOM1Q2M3G4 852 aaPredicted RBP13.33□□□□□ -0.28
CBX3-205ENST00000462165 POTEEQ6S8J3 1075 aa13.33□□□□□ -0.28
CBX3-205ENST00000462165 MAPKAPK5Q8IW41 473 aa13.33□□□□□ -0.28
CBX3-205ENST00000462165 CCAR1Q8IX12 1150 aaKnown RBP13.33□□□□□ -0.28
CBX3-205ENST00000462165 CRACR2BQ8N4Y2 399 aaPredicted RBP13.33□□□□□ -0.28
CBX3-205ENST00000462165 APBA2Q99767 749 aa13.33□□□□□ -0.28
CBX3-205ENST00000462165 EMILIN3Q9NT22 766 aa13.33□□□□□ -0.28
CBX3-205ENST00000462165 VCANP13611 3396 aa13.33□□□□□ -0.28
CBX3-205ENST00000462165 IGSF3O75054 1194 aa13.32□□□□□ -0.28
CBX3-205ENST00000462165 MDM2Q00987 491 aaPredicted RBP13.32□□□□□ -0.28
CBX3-205ENST00000462165 USP17L2Q6R6M4 530 aa13.32□□□□□ -0.28
CBX3-205ENST00000462165 ADGRA1Q86SQ6 560 aa13.32□□□□□ -0.28
CBX3-205ENST00000462165 C12orf42Q96LP6 360 aa13.32□□□□□ -0.28
CBX3-205ENST00000462165 PAGR1Q9BTK6 254 aa13.32□□□□□ -0.28
CBX3-205ENST00000462165 TRIM34Q9BYJ4 488 aa13.32□□□□□ -0.28
CBX3-205ENST00000462165 GPR108Q9NPR9 543 aa13.32□□□□□ -0.28
CBX3-205ENST00000462165 PALD1Q9ULE6 856 aa13.32□□□□□ -0.28
CBX3-205ENST00000462165 RABGAP1Q9Y3P9 1069 aa13.32□□□□□ -0.28
CBX3-205ENST00000462165 PNMA6EA0A0J9YXQ4 647 aa13.31□□□□□ -0.28
CBX3-205ENST00000462165 POTEB2H3BUK9 544 aa13.31□□□□□ -0.28
CBX3-205ENST00000462165 GNAI2P04899 355 aa13.31□□□□□ -0.28
CBX3-205ENST00000462165 CYP2E1P05181 493 aaPredicted RBP13.31□□□□□ -0.28
CBX3-205ENST00000462165 HLA-DOAP06340 250 aa13.31□□□□□ -0.28
CBX3-205ENST00000462165 MAP2K5Q13163 448 aa13.31□□□□□ -0.28
CBX3-205ENST00000462165 TTC39AQ5SRH9 613 aa13.31□□□□□ -0.28
CBX3-205ENST00000462165 FAM109BQ6ICB4 259 aaPredicted RBP13.31□□□□□ -0.28
CBX3-205ENST00000462165 ATF7IPQ6VMQ6 1270 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms