RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 ZBTB21Q9ULJ3 1066 aa37.05■■■■□ 3.52
CMTM4-202ENST00000394106 CYP2C8P10632 490 aa37.04■■■■□ 3.52
CMTM4-202ENST00000394106 CAP1Q01518 475 aa37.04■■■■□ 3.52
CMTM4-202ENST00000394106 HMGCS2P54868 508 aa37.03■■■■□ 3.52
CMTM4-202ENST00000394106 TATDN1Q6P1N9 297 aa37.03■■■■□ 3.52
CMTM4-202ENST00000394106 GINM1Q9NU53 330 aa37.03■■■■□ 3.52
CMTM4-202ENST00000394106 CYP2D6P10635 497 aa37.02■■■■□ 3.52
CMTM4-202ENST00000394106 EVX2Q03828 476 aa37.02■■■■□ 3.52
CMTM4-202ENST00000394106 C17orf99Q6UX52 265 aa37.02■■■■□ 3.52
CMTM4-202ENST00000394106 ATP8A2Q9NTI2 1148 aa37.02■■■■□ 3.52
CMTM4-202ENST00000394106 AGTPBP1Q9UPW5 1226 aa37.02■■■■□ 3.52
CMTM4-202ENST00000394106 SLC4A4Q9Y6R1 1079 aa37.02■■■■□ 3.52
CMTM4-202ENST00000394106 RNF113AO15541 343 aaKnown RBP37.01■■■■□ 3.52
CMTM4-202ENST00000394106 GH2P01242 217 aa37.01■■■■□ 3.52
CMTM4-202ENST00000394106 TREML2Q5T2D2 321 aa37.01■■■■□ 3.52
CMTM4-202ENST00000394106 WDR18Q9BV38 432 aa37.01■■■■□ 3.52
CMTM4-202ENST00000394106 SLC45A1Q9Y2W3 748 aa37.01■■■■□ 3.52
CMTM4-202ENST00000394106 ADGRA2Q96PE1 1338 aa37.01■■■■□ 3.52
CMTM4-202ENST00000394106 BAZ2AQ9UIF9 1905 aaKnown RBP37■■■■□ 3.51
CMTM4-202ENST00000394106 LOC285556D6RIA3 1793 aa37■■■■□ 3.51
CMTM4-202ENST00000394106 ECM2O94769 699 aaPredicted RBP37■■■■□ 3.51
CMTM4-202ENST00000394106 MTMR2Q13614 643 aa37■■■■□ 3.51
CMTM4-202ENST00000394106 KIF22Q14807 665 aa37■■■■□ 3.51
CMTM4-202ENST00000394106 CERKLQ49MI3 558 aaPredicted RBP37■■■■□ 3.51
CMTM4-202ENST00000394106 PROCA1Q8NCQ7 364 aaPredicted RBP37■■■■□ 3.51
CMTM4-202ENST00000394106 SALL3Q9BXA9 1300 aa37■■■■□ 3.51
CMTM4-202ENST00000394106 SHMT1P34896 483 aa36.99■■■■□ 3.51
CMTM4-202ENST00000394106 LACTBP83111 547 aaPredicted RBP36.99■■■■□ 3.51
CMTM4-202ENST00000394106 ARHGEF6Q15052 776 aa36.99■■■■□ 3.51
CMTM4-202ENST00000394106 DDRGK1Q96HY6 314 aa36.99■■■■□ 3.51
CMTM4-202ENST00000394106 ZSWIM8A7E2V4 1837 aa36.99■■■■□ 3.51
CMTM4-202ENST00000394106 ZFYP08048 801 aaPredicted RBP36.98■■■■□ 3.51
CMTM4-202ENST00000394106 APPBP2Q92624 585 aa36.98■■■■□ 3.51
CMTM4-202ENST00000394106 ARHGAP39Q9C0H5 1083 aa36.98■■■■□ 3.51
CMTM4-202ENST00000394106 IGHDP01880 384 aa36.97■■■■□ 3.51
CMTM4-202ENST00000394106 GABPAQ06546 454 aa36.97■■■■□ 3.51
CMTM4-202ENST00000394106 ABCB5Q2M3G0 1257 aa36.97■■■■□ 3.51
CMTM4-202ENST00000394106 B4GALNT3Q6L9W6 998 aa36.97■■■■□ 3.51
CMTM4-202ENST00000394106 FSD1Q9BTV5 496 aa36.97■■■■□ 3.51
CMTM4-202ENST00000394106 PTPN22Q9Y2R2 807 aa36.97■■■■□ 3.51
CMTM4-202ENST00000394106 BACE1P56817 501 aa36.96■■■■□ 3.51
CMTM4-202ENST00000394106 IRX6P78412 446 aaPredicted RBP36.96■■■■□ 3.51
CMTM4-202ENST00000394106 LRRFIP1Q32MZ4 808 aaKnown RBP36.96■■■■□ 3.51
CMTM4-202ENST00000394106 SH3D19Q5HYK7 790 aa36.96■■■■□ 3.51
CMTM4-202ENST00000394106 SMCR8Q8TEV9 937 aaPredicted RBP36.96■■■■□ 3.51
CMTM4-202ENST00000394106 OSBP2Q969R2 916 aa36.96■■■■□ 3.51
CMTM4-202ENST00000394106 LNPKQ9C0E8 428 aa36.96■■■■□ 3.51
CMTM4-202ENST00000394106 RAB3GAP1Q15042 981 aa36.95■■■■□ 3.51
CMTM4-202ENST00000394106 SMC5Q8IY18 1101 aa36.95■■■■□ 3.51
CMTM4-202ENST00000394106 AMOTL1Q8IY63 956 aa36.95■■■■□ 3.51
CMTM4-202ENST00000394106 STRBPQ96SI9 672 aaKnown RBP36.95■■■■□ 3.51
CMTM4-202ENST00000394106 CABP5Q9NP86 173 aa36.95■■■■□ 3.51
CMTM4-202ENST00000394106 TMOD4Q9NZQ9 345 aa36.95■■■■□ 3.51
CMTM4-202ENST00000394106 CYP2D7A0A087X1C5 515 aa36.94■■■■□ 3.5
CMTM4-202ENST00000394106 USP17L10C9JJH3 530 aa36.94■■■■□ 3.5
CMTM4-202ENST00000394106 DYNLL2Q96FJ2 89 aa36.94■■■■□ 3.5
CMTM4-202ENST00000394106 PNMA3Q9UL41 463 aa36.94■■■■□ 3.5
CMTM4-202ENST00000394106 USP17L12C9JPN9 530 aa36.93■■■■□ 3.5
CMTM4-202ENST00000394106 USP17L21D6R901 530 aa36.93■■■■□ 3.5
CMTM4-202ENST00000394106 PDE1AP54750 535 aa36.93■■■■□ 3.5
CMTM4-202ENST00000394106 SLC44A5Q8NCS7 719 aa36.93■■■■□ 3.5
CMTM4-202ENST00000394106 STAP2Q9UGK3 403 aa36.93■■■■□ 3.5
CMTM4-202ENST00000394106 C19orf81C9J6K1 198 aa36.92■■■■□ 3.5
CMTM4-202ENST00000394106 BCRP11274 1271 aa36.92■■■■□ 3.5
CMTM4-202ENST00000394106 PABPC4Q13310 644 aaKnown RBP eCLIP36.92■■■■□ 3.5
CMTM4-202ENST00000394106 M0R2C6 588 aa36.91■■■■□ 3.5
CMTM4-202ENST00000394106 MPHOSPH10O00566 681 aaKnown RBP36.91■■■■□ 3.5
CMTM4-202ENST00000394106 C12orf60Q5U649 245 aa36.91■■■■□ 3.5
CMTM4-202ENST00000394106 SWAP70Q9UH65 585 aa36.91■■■■□ 3.5
CMTM4-202ENST00000394106 MYH8P13535 1937 aa36.91■■■■□ 3.5
CMTM4-202ENST00000394106 GPAA1O43292 621 aa36.9■■■■□ 3.5
CMTM4-202ENST00000394106 OSBPP22059 807 aa36.9■■■■□ 3.5
CMTM4-202ENST00000394106 PSMC4P43686 418 aa36.9■■■■□ 3.5
CMTM4-202ENST00000394106 FEZ1Q99689 392 aa36.9■■■■□ 3.5
CMTM4-202ENST00000394106 SMIM22K7EJ46 135 aa36.89■■■■□ 3.5
CMTM4-202ENST00000394106 CTGFP29279 349 aa36.89■■■■□ 3.5
CMTM4-202ENST00000394106 SOX10P56693 466 aa36.89■■■■□ 3.5
CMTM4-202ENST00000394106 CTR9Q6PD62 1173 aa36.89■■■■□ 3.5
CMTM4-202ENST00000394106 FMNL1O95466 1100 aaPredicted RBP36.88■■■■□ 3.49
CMTM4-202ENST00000394106 ZYXQ15942 572 aaKnown RBP36.88■■■■□ 3.49
CMTM4-202ENST00000394106 ASCC2Q9H1I8 757 aaPredicted RBP36.88■■■■□ 3.49
CMTM4-202ENST00000394106 SEPT2Q15019 361 aa36.87■■■■□ 3.49
CMTM4-202ENST00000394106 USP17L2Q6R6M4 530 aa36.87■■■■□ 3.49
CMTM4-202ENST00000394106 CHD1LQ86WJ1 897 aa36.87■■■■□ 3.49
CMTM4-202ENST00000394106 TRIM47Q96LD4 638 aa36.87■■■■□ 3.49
CMTM4-202ENST00000394106 PTCH2Q9Y6C5 1203 aa36.87■■■■□ 3.49
CMTM4-202ENST00000394106 GSG1L2A8MUP6 293 aa36.86■■■■□ 3.49
CMTM4-202ENST00000394106 GUCY1A2P33402 732 aa36.86■■■■□ 3.49
CMTM4-202ENST00000394106 ANKRD13CQ8N6S4 541 aa36.86■■■■□ 3.49
CMTM4-202ENST00000394106 SEC62Q99442 399 aaKnown RBP36.86■■■■□ 3.49
CMTM4-202ENST00000394106 EMILIN3Q9NT22 766 aa36.86■■■■□ 3.49
CMTM4-202ENST00000394106 ARPP21Q9UBL0 812 aaPredicted RBP36.86■■■■□ 3.49
CMTM4-202ENST00000394106 TAOK2Q9UL54 1235 aa36.86■■■■□ 3.49
CMTM4-202ENST00000394106 GNRH1P01148 92 aa36.85■■■■□ 3.49
CMTM4-202ENST00000394106 IRX3P78415 501 aaPredicted RBP36.85■■■■□ 3.49
CMTM4-202ENST00000394106 NUCB1Q02818 461 aa36.85■■■■□ 3.49
CMTM4-202ENST00000394106 ACER1Q8TDN7 264 aa36.85■■■■□ 3.49
CMTM4-202ENST00000394106 EVI5LQ96CN4 794 aa36.85■■■■□ 3.49
CMTM4-202ENST00000394106 APPP05067 770 aa36.84■■■■□ 3.49
CMTM4-202ENST00000394106 GNAT2P19087 354 aa36.84■■■■□ 3.49
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms