RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman


Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 PCBP2Q15366 365 aaKnown RBP eCLIP28.87■■■□□ 2.213e-12■■■■■ 52.8
CMTM4-202ENST00000394106 DDX3XO00571 662 aaKnown RBP eCLIP31.53■■■□□ 2.647e-22■■■■■ 46.8
CMTM4-202ENST00000394106 TARDBPQ13148 414 aaKnown RBP eCLIP30.66■■■□□ 2.59e-8■■■■■ 28.7
CMTM4-202ENST00000394106 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP26.08■■□□□ 1.764e-7■■■■□ 26.6
CMTM4-202ENST00000394106 PTBP1P26599 531 aaKnown RBP eCLIP23.42■■□□□ 1.342e-7■■■■□ 20.8
CMTM4-202ENST00000394106 UPF1Q92900 1129 aaKnown RBP eCLIP43.25■■■■■ 4.518e-7■□□□□ 10.2
CMTM4-202ENST00000394106 ILF3Q12906 894 aaKnown RBP eCLIP30.57■■■□□ 2.484e-7■□□□□ 9.9
CMTM4-202ENST00000394106 HNRNPLP14866 589 aaKnown RBP eCLIP32.02■■■□□ 2.722e-9■□□□□ 9.9
Retrieved 8 of 8 RNA–protein pairs in 4.5 ms