RNA–Protein interactions for RNA: ENSMUST00000187938.6

Fn1-211, Transcript of Fibronectin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Fn1, Length 7,965 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1-211ENSMUST00000187938 Myo15bI7HPW8 3033 aa6.26□□□□□ -1.41
Fn1-211ENSMUST00000187938 Gm19668J3QMD1 248 aa6.25□□□□□ -1.41
Fn1-211ENSMUST00000187938 TrioQ0KL02 3102 aa6.24□□□□□ -1.41
Fn1-211ENSMUST00000187938 Gm17416Q30KP4 66 aa6.23□□□□□ -1.41
Fn1-211ENSMUST00000187938 Gm7173A0A0G2JEB6 3132 aa6.23□□□□□ -1.41
Fn1-211ENSMUST00000187938 Ranbp2Q9ERU9 3053 aaKnown RBP6.23□□□□□ -1.41
Fn1-211ENSMUST00000187938 BptfA2A654 3036 aaKnown RBP6.2□□□□□ -1.42
Fn1-211ENSMUST00000187938 TgO08710 2766 aa6.18□□□□□ -1.42
Fn1-211ENSMUST00000187938 Celsr1O35161 3034 aa6.17□□□□□ -1.42
Fn1-211ENSMUST00000187938 Dmxl2Q8BPN8 3032 aa6.17□□□□□ -1.42
Fn1-211ENSMUST00000187938 Lama2Q60675 3118 aaKnown RBP6.16□□□□□ -1.42
Fn1-211ENSMUST00000187938 2310079G19RikQ9D6L6 185 aa6.16□□□□□ -1.42
Fn1-211ENSMUST00000187938 2210017I01RikA0A0A6YVV1 95 aa6.14□□□□□ -1.43
Fn1-211ENSMUST00000187938 Gm17402F6Z0L5 76 aa6.13□□□□□ -1.43
Fn1-211ENSMUST00000187938 Unc80Q8BLN6 3261 aa6.13□□□□□ -1.43
Fn1-211ENSMUST00000187938 Pdzd2E9Q1M1 2796 aa6.13□□□□□ -1.43
Fn1-211ENSMUST00000187938 Zfhx3Q61329 3726 aa6.11□□□□□ -1.43
Fn1-211ENSMUST00000187938 Sprr2gO70558 76 aa6.1□□□□□ -1.43
Fn1-211ENSMUST00000187938 Trank1Q8BV79 2999 aa6.1□□□□□ -1.43
Fn1-211ENSMUST00000187938 Nf1Q04690 2841 aa6.08□□□□□ -1.44
Fn1-211ENSMUST00000187938 LrbaQ9ESE1 2856 aa6.06□□□□□ -1.44
Fn1-211ENSMUST00000187938 Myo15aQ9QZZ4 3511 aa6.04□□□□□ -1.44
Fn1-211ENSMUST00000187938 AtmQ62388 3066 aa6.04□□□□□ -1.44
Fn1-211ENSMUST00000187938 Tenm2Q9WTS5 2764 aa6.03□□□□□ -1.44
Fn1-211ENSMUST00000187938 Zzef1Q5SSH7 2924 aa6.02□□□□□ -1.45
Fn1-211ENSMUST00000187938 DspE9Q557 2883 aaKnown RBP6.02□□□□□ -1.45
Fn1-211ENSMUST00000187938 Cfap54Q8C6S9 3106 aa6.01□□□□□ -1.45
Fn1-211ENSMUST00000187938 Mki67E9PVX6 3177 aaKnown RBP6.01□□□□□ -1.45
Fn1-211ENSMUST00000187938 Usp34Q6ZQ93 3582 aa6□□□□□ -1.45
Fn1-211ENSMUST00000187938 Krtap8-1O08633 61 aa5.99□□□□□ -1.45
Fn1-211ENSMUST00000187938 Chd7A2AJK6 2986 aaKnown RBP5.92□□□□□ -1.46
Fn1-211ENSMUST00000187938 AspmQ8CJ27 3122 aa5.92□□□□□ -1.46
Fn1-211ENSMUST00000187938 Frem2Q6NVD0 3160 aa5.88□□□□□ -1.47
Fn1-211ENSMUST00000187938 Tenm3Q9WTS6 2715 aa5.87□□□□□ -1.47
Fn1-211ENSMUST00000187938 Gm18596A0A1W2P860 280 aa5.87□□□□□ -1.47
Fn1-211ENSMUST00000187938 Krtap13-1Q8K198 168 aa5.87□□□□□ -1.47
Fn1-211ENSMUST00000187938 Krtap19-5O08632 62 aa5.86□□□□□ -1.47
Fn1-211ENSMUST00000187938 FrylF8VQ05 3007 aa5.86□□□□□ -1.47
Fn1-211ENSMUST00000187938 Lama1P19137 3084 aa5.85□□□□□ -1.47
Fn1-211ENSMUST00000187938 NbeaQ9EPN1 2936 aa5.85□□□□□ -1.47
Fn1-211ENSMUST00000187938 Vps13aQ5H8C4 3166 aa5.84□□□□□ -1.47
Fn1-211ENSMUST00000187938 Adgrg4B7ZCC9 3073 aa5.84□□□□□ -1.48
Fn1-211ENSMUST00000187938 Celsr3Q91ZI0 3301 aa5.83□□□□□ -1.48
Fn1-211ENSMUST00000187938 Cdh23Q99PF4 3354 aa5.78□□□□□ -1.48
Fn1-211ENSMUST00000187938 VwfQ8CIZ8 2813 aa5.77□□□□□ -1.49
Fn1-211ENSMUST00000187938 Lrrc37aB1AWG4 3215 aa5.75□□□□□ -1.49
Fn1-211ENSMUST00000187938 Dchs2A0A0A6YW72 3346 aa5.74□□□□□ -1.49
Fn1-211ENSMUST00000187938 Celsr2Q9R0M0 2920 aa5.7□□□□□ -1.5
Fn1-211ENSMUST00000187938 Gm19402J3QJV4 266 aa5.68□□□□□ -1.5
Fn1-211ENSMUST00000187938 Col6a3E9PWQ3 3284 aa5.65□□□□□ -1.5
Fn1-211ENSMUST00000187938 2310046K23RikA0A0A6YVW6 87 aa5.63□□□□□ -1.51
Fn1-211ENSMUST00000187938 Krtap7-1Q9D3I6 87 aa5.63□□□□□ -1.51
Fn1-211ENSMUST00000187938 Szt2A2A9C3 3431 aa5.62□□□□□ -1.51
Fn1-211ENSMUST00000187938 SmcpP15265 143 aa5.56□□□□□ -1.52
Fn1-211ENSMUST00000187938 SpegQ62407 3262 aa5.54□□□□□ -1.52
Fn1-211ENSMUST00000187938 Brca2P97929 3329 aa5.52□□□□□ -1.53
Fn1-211ENSMUST00000187938 Krtap19-9aF8WH65 55 aa5.51□□□□□ -1.53
Fn1-211ENSMUST00000187938 LorP18165 486 aa5.5□□□□□ -1.53
Fn1-211ENSMUST00000187938 Gm11939A2A592 99 aa5.49□□□□□ -1.53
Fn1-211ENSMUST00000187938 Helz2E9QAM5 2947 aaKnown RBP5.43□□□□□ -1.54
Fn1-211ENSMUST00000187938 Dchs1E9PVD3 3291 aa5.42□□□□□ -1.54
Fn1-211ENSMUST00000187938 OtogO55225 2910 aa5.41□□□□□ -1.54
Fn1-211ENSMUST00000187938 Krtap3-1A2A591 98 aa5.39□□□□□ -1.55
Fn1-211ENSMUST00000187938 Akap9Q70FJ1 3797 aa5.37□□□□□ -1.55
Fn1-211ENSMUST00000187938 Muc5acE9QAQ8 3455 aa5.37□□□□□ -1.55
Fn1-211ENSMUST00000187938 DmdP11531 3678 aa5.35□□□□□ -1.55
Fn1-211ENSMUST00000187938 Sprr2fO70557 76 aa5.34□□□□□ -1.55
Fn1-211ENSMUST00000187938 Lce3bQ9CQM7 98 aa5.33□□□□□ -1.56
Fn1-211ENSMUST00000187938 Col7a1Q63870 2944 aa5.3□□□□□ -1.56
Fn1-211ENSMUST00000187938 Krtap19-9bQ99NG9 58 aa5.28□□□□□ -1.56
Fn1-211ENSMUST00000187938 VcanQ62059 3357 aa5.27□□□□□ -1.57
Fn1-211ENSMUST00000187938 Sprr2iO70560 76 aa5.21□□□□□ -1.58
Fn1-211ENSMUST00000187938 Lce3cQ91V05 98 aa5.2□□□□□ -1.58
Fn1-211ENSMUST00000187938 Vps13cQ8BX70 3748 aa5.19□□□□□ -1.58
Fn1-211ENSMUST00000187938 Smg1Q8BKX6 3658 aaKnown RBP5.18□□□□□ -1.58
Fn1-211ENSMUST00000187938 Krtap1-5A2A590 122 aa5.17□□□□□ -1.58
Fn1-211ENSMUST00000187938 Lce1mQ9CR91 182 aa5.16□□□□□ -1.58
Fn1-211ENSMUST00000187938 Krtap1-4Q3V2D6 188 aa5.16□□□□□ -1.58
Fn1-211ENSMUST00000187938 Krtap12-1Q9Z287 130 aa5.13□□□□□ -1.59
Fn1-211ENSMUST00000187938 Gm38119A0A0A6YX29 146 aa5.12□□□□□ -1.59
Fn1-211ENSMUST00000187938 Wdfy3Q6VNB8 3508 aa5.1□□□□□ -1.59
Fn1-211ENSMUST00000187938 RelnQ60841 3461 aa5.08□□□□□ -1.6
Fn1-211ENSMUST00000187938 Ank2Q8C8R3 3898 aa5.07□□□□□ -1.6
Fn1-211ENSMUST00000187938 Sprr2a3Q4KL71 83 aa5.05□□□□□ -1.6
Fn1-211ENSMUST00000187938 Sprr2a1Q9CQK8 83 aa5.05□□□□□ -1.6
Fn1-211ENSMUST00000187938 SpenQ62504 3644 aaKnown RBP5.02□□□□□ -1.61
Fn1-211ENSMUST00000187938 Muc6Q80T03 2850 aa5□□□□□ -1.61
Fn1-211ENSMUST00000187938 Lce3dE9Q8V1 98 aa5□□□□□ -1.61
Fn1-211ENSMUST00000187938 Lce3eF8VQJ0 98 aa4.97□□□□□ -1.61
Fn1-211ENSMUST00000187938 Lce3fQ6PAI4 98 aa4.97□□□□□ -1.61
Fn1-211ENSMUST00000187938 Huwe1Q7TMY8 4377 aaKnown RBP4.96□□□□□ -1.62
Fn1-211ENSMUST00000187938 Lce1jD3YUU5 139 aa4.95□□□□□ -1.62
Fn1-211ENSMUST00000187938 Lce1gQ9D195 139 aa4.95□□□□□ -1.62
Fn1-211ENSMUST00000187938 Lce1iQ9D6P5 149 aa4.95□□□□□ -1.62
Fn1-211ENSMUST00000187938 Lce1hQ9D6R3 140 aa4.95□□□□□ -1.62
Fn1-211ENSMUST00000187938 Krtap3-2Q9D638 99 aa4.94□□□□□ -1.62
Fn1-211ENSMUST00000187938 Krtap3-3Q9D7P0 99 aa4.94□□□□□ -1.62
Fn1-211ENSMUST00000187938 Csmd1Q923L3 3564 aa4.92□□□□□ -1.62
Fn1-211ENSMUST00000187938 Zfhx4Q9JJN2 3550 aa4.92□□□□□ -1.62
Fn1-211ENSMUST00000187938 Gm10272F7CZ33 110 aa4.9□□□□□ -1.63
Retrieved 100 of 22,080 RNA–protein pairs in 149.7 ms