RNA–Protein interactions for RNA: ENSMUST00000160721.7

Pcdh1-203, Transcript of Protocadherin 1 (Fragment), mousemouse

TSL 5 BASIC

Gene Pcdh1, Length 5,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-203ENSMUST00000160721 Krtap29-1A2A5X4 342 aa9.49□□□□□ -0.89
Pcdh1-203ENSMUST00000160721 Romo1P60603 79 aa9.48□□□□□ -0.89
Pcdh1-203ENSMUST00000160721 Tenm3Q9WTS6 2715 aa9.47□□□□□ -0.89
Pcdh1-203ENSMUST00000160721 Rpl37Q9D823 97 aa9.47□□□□□ -0.89
Pcdh1-203ENSMUST00000160721 2310061N02RikQ9D6S9 174 aa9.47□□□□□ -0.89
Pcdh1-203ENSMUST00000160721 Srrm2Q8BTI8 2703 aaKnown RBP9.43□□□□□ -0.9
Pcdh1-203ENSMUST00000160721 LrbaQ9ESE1 2856 aa9.41□□□□□ -0.9
Pcdh1-203ENSMUST00000160721 Gm2696A0A1W2P709 240 aa9.39□□□□□ -0.91
Pcdh1-203ENSMUST00000160721 Pdzd2E9Q1M1 2796 aa9.38□□□□□ -0.91
Pcdh1-203ENSMUST00000160721 SmcpP15265 143 aa9.38□□□□□ -0.91
Pcdh1-203ENSMUST00000160721 Fam229aB2KGE5 128 aa9.37□□□□□ -0.91
Pcdh1-203ENSMUST00000160721 Gm10382Q3V0T5 144 aa9.37□□□□□ -0.91
Pcdh1-203ENSMUST00000160721 Sec61bQ9CQS8 96 aaKnown RBP9.33□□□□□ -0.92
Pcdh1-203ENSMUST00000160721 DmdP11531 3678 aa9.33□□□□□ -0.92
Pcdh1-203ENSMUST00000160721 Gm5767A0A0J9YTU8 78 aa9.3□□□□□ -0.92
Pcdh1-203ENSMUST00000160721 Krtap14O08640 167 aa9.29□□□□□ -0.92
Pcdh1-203ENSMUST00000160721 Tnp2P11378 117 aa9.29□□□□□ -0.92
Pcdh1-203ENSMUST00000160721 Muc5acE9QAQ8 3455 aa9.27□□□□□ -0.93
Pcdh1-203ENSMUST00000160721 Akap9Q70FJ1 3797 aa9.27□□□□□ -0.93
Pcdh1-203ENSMUST00000160721 Zfhx3Q61329 3726 aa9.25□□□□□ -0.93
Pcdh1-203ENSMUST00000160721 BC029722A0A0N4SW31 51 aa9.23□□□□□ -0.93
Pcdh1-203ENSMUST00000160721 Gm2310J3QNJ2 377 aa9.23□□□□□ -0.93
Pcdh1-203ENSMUST00000160721 Vps13cQ8BX70 3748 aa9.23□□□□□ -0.93
Pcdh1-203ENSMUST00000160721 TgO08710 2766 aa9.18□□□□□ -0.94
Pcdh1-203ENSMUST00000160721 ApcQ61315 2845 aa9.18□□□□□ -0.94
Pcdh1-203ENSMUST00000160721 Gm19426M0QWC7 77 aa9.17□□□□□ -0.94
Pcdh1-203ENSMUST00000160721 Tenm1Q9WTS4 2731 aa9.04□□□□□ -0.96
Pcdh1-203ENSMUST00000160721 OtogO55225 2910 aa9.03□□□□□ -0.96
Pcdh1-203ENSMUST00000160721 Cox6b2Q80ZN9 88 aa9.02□□□□□ -0.96
Pcdh1-203ENSMUST00000160721 Tenm2Q9WTS5 2764 aa8.99□□□□□ -0.97
Pcdh1-203ENSMUST00000160721 Helz2E9QAM5 2947 aaKnown RBP8.99□□□□□ -0.97
Pcdh1-203ENSMUST00000160721 Rps29P62274 56 aa8.96□□□□□ -0.97
Pcdh1-203ENSMUST00000160721 Lama5Q61001 3718 aa8.95□□□□□ -0.98
Pcdh1-203ENSMUST00000160721 Ndufaf8A2AMZ4 74 aa8.95□□□□□ -0.98
Pcdh1-203ENSMUST00000160721 Zfhx4Q9JJN2 3550 aa8.93□□□□□ -0.98
Pcdh1-203ENSMUST00000160721 D6Ertd527eA0A0N4SWI3 464 aa8.91□□□□□ -0.98
Pcdh1-203ENSMUST00000160721 Smg1Q8BKX6 3658 aaKnown RBP8.81□□□□□ -1
Pcdh1-203ENSMUST00000160721 Gm5965D3Z724 196 aa8.81□□□□□ -1
Pcdh1-203ENSMUST00000160721 2310057N15RikQ9D6T8 200 aa8.74□□□□□ -1.01
Pcdh1-203ENSMUST00000160721 Col7a1Q63870 2944 aa8.73□□□□□ -1.01
Pcdh1-203ENSMUST00000160721 Fbn1Q61554 2873 aaKnown RBP8.73□□□□□ -1.01
Pcdh1-203ENSMUST00000160721 Gm21887J3QQ04 176 aa8.72□□□□□ -1.01
Pcdh1-203ENSMUST00000160721 VwfQ8CIZ8 2813 aa8.65□□□□□ -1.03
Pcdh1-203ENSMUST00000160721 Gm9112A2AI92 75 aa8.65□□□□□ -1.03
Pcdh1-203ENSMUST00000160721 Csmd1Q923L3 3564 aa8.64□□□□□ -1.03
Pcdh1-203ENSMUST00000160721 SpenQ62504 3644 aaKnown RBP8.6□□□□□ -1.03
Pcdh1-203ENSMUST00000160721 Megf8P60882 2789 aa8.55□□□□□ -1.04
Pcdh1-203ENSMUST00000160721 A930033H14RikG5E8X6 103 aa8.55□□□□□ -1.04
Pcdh1-203ENSMUST00000160721 Gm20537G3UYK7 97 aa8.53□□□□□ -1.04
Pcdh1-203ENSMUST00000160721 Tnp1P10856 55 aa8.49□□□□□ -1.05
Pcdh1-203ENSMUST00000160721 Gm884A2A9H6 3643 aa8.47□□□□□ -1.05
Pcdh1-203ENSMUST00000160721 Gm40193A0A1B0GT39 78 aa8.46□□□□□ -1.06
Pcdh1-203ENSMUST00000160721 Gm9736A0A1W2P7N1 277 aa8.46□□□□□ -1.06
Pcdh1-203ENSMUST00000160721 Svep1A2AVA0 3567 aa8.43□□□□□ -1.06
Pcdh1-203ENSMUST00000160721 Muc6Q80T03 2850 aa8.38□□□□□ -1.07
Pcdh1-203ENSMUST00000160721 Muc4Q8JZM8 3443 aa8.31□□□□□ -1.08
Pcdh1-203ENSMUST00000160721 Ank2Q8C8R3 3898 aa8.3□□□□□ -1.08
Pcdh1-203ENSMUST00000160721 B930094E09RikQ8C4T2 136 aa8.29□□□□□ -1.08
Pcdh1-203ENSMUST00000160721 Gm9918Q8BUR5 174 aa8.29□□□□□ -1.08
Pcdh1-203ENSMUST00000160721 Cmya5Q70KF4 3739 aa8.25□□□□□ -1.09
Pcdh1-203ENSMUST00000160721 Csmd2V9GX34 3611 aa8.24□□□□□ -1.09
Pcdh1-203ENSMUST00000160721 2310079G19RikQ9D6L6 185 aa8.23□□□□□ -1.09
Pcdh1-203ENSMUST00000160721 Krtap19-5O08632 62 aa8.09□□□□□ -1.11
Pcdh1-203ENSMUST00000160721 Prm2P07978 107 aa8.08□□□□□ -1.12
Pcdh1-203ENSMUST00000160721 Gm10318A0A1W2P728 225 aa8.01□□□□□ -1.13
Pcdh1-203ENSMUST00000160721 Gm17416Q30KP4 66 aa8.01□□□□□ -1.13
Pcdh1-203ENSMUST00000160721 Crct1Q6PAI5 102 aa7.92□□□□□ -1.14
Pcdh1-203ENSMUST00000160721 2210017I01RikA0A0A6YVV1 95 aa7.86□□□□□ -1.15
Pcdh1-203ENSMUST00000160721 Dnah14A0A140LIJ4 4489 aa7.81□□□□□ -1.16
Pcdh1-203ENSMUST00000160721 Gm17402F6Z0L5 76 aa7.77□□□□□ -1.17
Pcdh1-203ENSMUST00000160721 LystP97412 3788 aa7.75□□□□□ -1.17
Pcdh1-203ENSMUST00000160721 Gm11939A2A592 99 aa7.73□□□□□ -1.17
Pcdh1-203ENSMUST00000160721 Huwe1Q7TMY8 4377 aaKnown RBP7.67□□□□□ -1.18
Pcdh1-203ENSMUST00000160721 CubnQ9JLB4 3623 aa7.64□□□□□ -1.19
Pcdh1-203ENSMUST00000160721 Gm18596A0A1W2P860 280 aa7.58□□□□□ -1.2
Pcdh1-203ENSMUST00000160721 Gm19668J3QMD1 248 aa7.57□□□□□ -1.2
Pcdh1-203ENSMUST00000160721 Krtap13-1Q8K198 168 aa7.54□□□□□ -1.2
Pcdh1-203ENSMUST00000160721 Dnah10D3YYQ8 4591 aa7.46□□□□□ -1.22
Pcdh1-203ENSMUST00000160721 4933428G20RikQ9D3X4 101 aa7.43□□□□□ -1.22
Pcdh1-203ENSMUST00000160721 Dnah5Q8VHE6 4621 aa7.43□□□□□ -1.22
Pcdh1-203ENSMUST00000160721 BsnO88737 3942 aa7.42□□□□□ -1.22
Pcdh1-203ENSMUST00000160721 PlecQ9QXS1 4691 aaKnown RBP7.36□□□□□ -1.23
Pcdh1-203ENSMUST00000160721 Krtap3-2Q9D638 99 aa7.36□□□□□ -1.23
Pcdh1-203ENSMUST00000160721 Krtap3-3Q9D7P0 99 aa7.36□□□□□ -1.23
Pcdh1-203ENSMUST00000160721 Krtap3-1A2A591 98 aa7.35□□□□□ -1.23
Pcdh1-203ENSMUST00000160721 Xirp2Q4U4S6 3784 aa7.35□□□□□ -1.23
Pcdh1-203ENSMUST00000160721 Hspg2Q05793 3707 aaKnown RBP7.34□□□□□ -1.23
Pcdh1-203ENSMUST00000160721 TnxbO35452 4006 aa7.31□□□□□ -1.24
Pcdh1-203ENSMUST00000160721 Stard9Q80TF6 4561 aa7.29□□□□□ -1.24
Pcdh1-203ENSMUST00000160721 Vps13dB1ART2 4390 aa7.29□□□□□ -1.24
Pcdh1-203ENSMUST00000160721 Csmd3Q80T79 3707 aa7.23□□□□□ -1.25
Pcdh1-203ENSMUST00000160721 Ryr1E9PZQ0 5035 aa7.22□□□□□ -1.25
Pcdh1-203ENSMUST00000160721 LorP18165 486 aa7.21□□□□□ -1.26
Pcdh1-203ENSMUST00000160721 Dnah17Q69Z23 4481 aa7.14□□□□□ -1.27
Pcdh1-203ENSMUST00000160721 Lce1mQ9CR91 182 aa7.07□□□□□ -1.28
Pcdh1-203ENSMUST00000160721 Gm19402J3QJV4 266 aa7.07□□□□□ -1.28
Pcdh1-203ENSMUST00000160721 PrkdcP97313 4128 aa7.05□□□□□ -1.28
Pcdh1-203ENSMUST00000160721 Dync1h1Q9JHU4 4644 aaKnown RBP7.01□□□□□ -1.29
Pcdh1-203ENSMUST00000160721 Dnah11E9Q7N9 4488 aa7□□□□□ -1.29
Pcdh1-203ENSMUST00000160721 Dync2h1Q45VK7 4306 aa6.99□□□□□ -1.29
Retrieved 100 of 22,080 RNA–protein pairs in 12.8 ms