RNA–Protein interactions for RNA: ENSMUST00000119954.8

Pcf11-201, Transcript of Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcf11, Length 5,995 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11-201ENSMUST00000119954 Muc2Q80Z19 2680 aa8.8□□□□□ -1
Pcf11-201ENSMUST00000119954 Frem2Q6NVD0 3160 aa8.78□□□□□ -1
Pcf11-201ENSMUST00000119954 Gm10318A0A1W2P728 225 aa8.73□□□□□ -1.01
Pcf11-201ENSMUST00000119954 2210017I01RikA0A0A6YVV1 95 aa8.71□□□□□ -1.02
Pcf11-201ENSMUST00000119954 KalrnA2CG49 2964 aa8.7□□□□□ -1.02
Pcf11-201ENSMUST00000119954 Vps13aQ5H8C4 3166 aa8.7□□□□□ -1.02
Pcf11-201ENSMUST00000119954 Wdfy3Q6VNB8 3508 aa8.69□□□□□ -1.02
Pcf11-201ENSMUST00000119954 4933428G20RikQ9D3X4 101 aa8.69□□□□□ -1.02
Pcf11-201ENSMUST00000119954 Gm7173A0A0G2JEB6 3132 aa8.66□□□□□ -1.02
Pcf11-201ENSMUST00000119954 BptfA2A654 3036 aaKnown RBP8.64□□□□□ -1.03
Pcf11-201ENSMUST00000119954 Celsr1O35161 3034 aa8.64□□□□□ -1.03
Pcf11-201ENSMUST00000119954 Igfn1Q3KNY0 2849 aa8.64□□□□□ -1.03
Pcf11-201ENSMUST00000119954 Myo15bI7HPW8 3033 aa8.63□□□□□ -1.03
Pcf11-201ENSMUST00000119954 DspE9Q557 2883 aaKnown RBP8.62□□□□□ -1.03
Pcf11-201ENSMUST00000119954 FryE9Q8I9 3020 aa8.58□□□□□ -1.04
Pcf11-201ENSMUST00000119954 DmdP11531 3678 aa8.56□□□□□ -1.04
Pcf11-201ENSMUST00000119954 FrylF8VQ05 3007 aa8.55□□□□□ -1.04
Pcf11-201ENSMUST00000119954 Brca2P97929 3329 aa8.53□□□□□ -1.04
Pcf11-201ENSMUST00000119954 Pdzd2E9Q1M1 2796 aa8.52□□□□□ -1.05
Pcf11-201ENSMUST00000119954 Lama1P19137 3084 aa8.52□□□□□ -1.05
Pcf11-201ENSMUST00000119954 LrbaQ9ESE1 2856 aa8.49□□□□□ -1.05
Pcf11-201ENSMUST00000119954 AtmQ62388 3066 aa8.49□□□□□ -1.05
Pcf11-201ENSMUST00000119954 Tenm4Q3UHK6 2771 aa8.48□□□□□ -1.05
Pcf11-201ENSMUST00000119954 AspmQ8CJ27 3122 aa8.48□□□□□ -1.05
Pcf11-201ENSMUST00000119954 Gm19668J3QMD1 248 aa8.46□□□□□ -1.06
Pcf11-201ENSMUST00000119954 Zzef1Q5SSH7 2924 aa8.45□□□□□ -1.06
Pcf11-201ENSMUST00000119954 FlncQ8VHX6 2726 aaKnown RBP8.45□□□□□ -1.06
Pcf11-201ENSMUST00000119954 Crct1Q6PAI5 102 aa8.45□□□□□ -1.06
Pcf11-201ENSMUST00000119954 Zfhx3Q61329 3726 aa8.43□□□□□ -1.06
Pcf11-201ENSMUST00000119954 Wdfy4E9Q2M9 3149 aa8.37□□□□□ -1.07
Pcf11-201ENSMUST00000119954 Celsr3Q91ZI0 3301 aa8.37□□□□□ -1.07
Pcf11-201ENSMUST00000119954 Lrrc37aB1AWG4 3215 aa8.36□□□□□ -1.07
Pcf11-201ENSMUST00000119954 Megf8P60882 2789 aa8.36□□□□□ -1.07
Pcf11-201ENSMUST00000119954 Dchs2A0A0A6YW72 3346 aa8.34□□□□□ -1.07
Pcf11-201ENSMUST00000119954 Celsr2Q9R0M0 2920 aa8.32□□□□□ -1.08
Pcf11-201ENSMUST00000119954 Myo15aQ9QZZ4 3511 aa8.31□□□□□ -1.08
Pcf11-201ENSMUST00000119954 Tenm1Q9WTS4 2731 aa8.3□□□□□ -1.08
Pcf11-201ENSMUST00000119954 Chd9Q8BYH8 2885 aa8.29□□□□□ -1.08
Pcf11-201ENSMUST00000119954 Vps13cQ8BX70 3748 aa8.26□□□□□ -1.09
Pcf11-201ENSMUST00000119954 Dmxl2Q8BPN8 3032 aa8.26□□□□□ -1.09
Pcf11-201ENSMUST00000119954 Adgrg4B7ZCC9 3073 aa8.24□□□□□ -1.09
Pcf11-201ENSMUST00000119954 NbeaQ9EPN1 2936 aa8.2□□□□□ -1.1
Pcf11-201ENSMUST00000119954 Nf1Q04690 2841 aa8.17□□□□□ -1.1
Pcf11-201ENSMUST00000119954 VcanQ62059 3357 aa8.16□□□□□ -1.1
Pcf11-201ENSMUST00000119954 Tenm2Q9WTS5 2764 aa8.15□□□□□ -1.1
Pcf11-201ENSMUST00000119954 Col6a3E9PWQ3 3284 aa8.15□□□□□ -1.11
Pcf11-201ENSMUST00000119954 Gm6358A0A087WPH4 74 aa8.14□□□□□ -1.11
Pcf11-201ENSMUST00000119954 Gm11939A2A592 99 aa8.14□□□□□ -1.11
Pcf11-201ENSMUST00000119954 Gm884A2A9H6 3643 aa8.14□□□□□ -1.11
Pcf11-201ENSMUST00000119954 Dchs1E9PVD3 3291 aa8.13□□□□□ -1.11
Pcf11-201ENSMUST00000119954 Krtap13-1Q8K198 168 aa8.11□□□□□ -1.11
Pcf11-201ENSMUST00000119954 Trank1Q8BV79 2999 aa8.09□□□□□ -1.11
Pcf11-201ENSMUST00000119954 Tenm3Q9WTS6 2715 aa8.04□□□□□ -1.12
Pcf11-201ENSMUST00000119954 RelnQ60841 3461 aa8.01□□□□□ -1.13
Pcf11-201ENSMUST00000119954 Krtap3-1A2A591 98 aa8□□□□□ -1.13
Pcf11-201ENSMUST00000119954 SpegQ62407 3262 aa7.98□□□□□ -1.13
Pcf11-201ENSMUST00000119954 Helz2E9QAM5 2947 aaKnown RBP7.98□□□□□ -1.13
Pcf11-201ENSMUST00000119954 Krtap19-5O08632 62 aa7.95□□□□□ -1.14
Pcf11-201ENSMUST00000119954 Akap9Q70FJ1 3797 aa7.94□□□□□ -1.14
Pcf11-201ENSMUST00000119954 Zfhx4Q9JJN2 3550 aa7.92□□□□□ -1.14
Pcf11-201ENSMUST00000119954 Krtap3-2Q9D638 99 aa7.91□□□□□ -1.14
Pcf11-201ENSMUST00000119954 Krtap3-3Q9D7P0 99 aa7.91□□□□□ -1.14
Pcf11-201ENSMUST00000119954 SpenQ62504 3644 aaKnown RBP7.9□□□□□ -1.14
Pcf11-201ENSMUST00000119954 Sprr2kO70562 68 aa7.9□□□□□ -1.14
Pcf11-201ENSMUST00000119954 Csmd1Q923L3 3564 aa7.83□□□□□ -1.16
Pcf11-201ENSMUST00000119954 Muc5acE9QAQ8 3455 aa7.74□□□□□ -1.17
Pcf11-201ENSMUST00000119954 Smg1Q8BKX6 3658 aaKnown RBP7.73□□□□□ -1.17
Pcf11-201ENSMUST00000119954 Lama5Q61001 3718 aa7.69□□□□□ -1.18
Pcf11-201ENSMUST00000119954 Krtap8-1O08633 61 aa7.67□□□□□ -1.18
Pcf11-201ENSMUST00000119954 VwfQ8CIZ8 2813 aa7.65□□□□□ -1.18
Pcf11-201ENSMUST00000119954 Krtap7-1Q9D3I6 87 aa7.59□□□□□ -1.19
Pcf11-201ENSMUST00000119954 Gm18596A0A1W2P860 280 aa7.54□□□□□ -1.2
Pcf11-201ENSMUST00000119954 Sprr2a3Q4KL71 83 aa7.5□□□□□ -1.21
Pcf11-201ENSMUST00000119954 Sprr2a1Q9CQK8 83 aa7.5□□□□□ -1.21
Pcf11-201ENSMUST00000119954 OtogO55225 2910 aa7.47□□□□□ -1.21
Pcf11-201ENSMUST00000119954 Sprr2gO70558 76 aa7.46□□□□□ -1.22
Pcf11-201ENSMUST00000119954 Svep1A2AVA0 3567 aa7.41□□□□□ -1.22
Pcf11-201ENSMUST00000119954 Cmya5Q70KF4 3739 aa7.4□□□□□ -1.22
Pcf11-201ENSMUST00000119954 LorP18165 486 aa7.37□□□□□ -1.23
Pcf11-201ENSMUST00000119954 Krtap1-5A2A590 122 aa7.35□□□□□ -1.23
Pcf11-201ENSMUST00000119954 Gm19402J3QJV4 266 aa7.34□□□□□ -1.24
Pcf11-201ENSMUST00000119954 Krtap19-9aF8WH65 55 aa7.33□□□□□ -1.24
Pcf11-201ENSMUST00000119954 Krtap19-9bQ99NG9 58 aa7.26□□□□□ -1.25
Pcf11-201ENSMUST00000119954 Ank2Q8C8R3 3898 aa7.22□□□□□ -1.25
Pcf11-201ENSMUST00000119954 Krtap1-4Q3V2D6 188 aa7.15□□□□□ -1.26
Pcf11-201ENSMUST00000119954 Krtap12-1Q9Z287 130 aa7.11□□□□□ -1.27
Pcf11-201ENSMUST00000119954 Col7a1Q63870 2944 aa7.09□□□□□ -1.27
Pcf11-201ENSMUST00000119954 LystP97412 3788 aa7.09□□□□□ -1.27
Pcf11-201ENSMUST00000119954 Muc4Q8JZM8 3443 aa7.04□□□□□ -1.28
Pcf11-201ENSMUST00000119954 Fbn1Q61554 2873 aaKnown RBP7.02□□□□□ -1.29
Pcf11-201ENSMUST00000119954 BsnO88737 3942 aa6.94□□□□□ -1.3
Pcf11-201ENSMUST00000119954 Lce3bQ9CQM7 98 aa6.89□□□□□ -1.31
Pcf11-201ENSMUST00000119954 2310046K23RikA0A0A6YVW6 87 aa6.87□□□□□ -1.31
Pcf11-201ENSMUST00000119954 Xirp2Q4U4S6 3784 aa6.86□□□□□ -1.31
Pcf11-201ENSMUST00000119954 Csmd2V9GX34 3611 aa6.86□□□□□ -1.31
Pcf11-201ENSMUST00000119954 CubnQ9JLB4 3623 aa6.84□□□□□ -1.31
Pcf11-201ENSMUST00000119954 Huwe1Q7TMY8 4377 aaKnown RBP6.78□□□□□ -1.32
Pcf11-201ENSMUST00000119954 Lce3cQ91V05 98 aa6.75□□□□□ -1.33
Pcf11-201ENSMUST00000119954 Lce1mQ9CR91 182 aa6.75□□□□□ -1.33
Pcf11-201ENSMUST00000119954 Muc6Q80T03 2850 aa6.73□□□□□ -1.33
Retrieved 100 of 22,080 RNA–protein pairs in 60.6 ms