RNA–Protein interactions for RNA: ENSMUST00000113054.8

Shroom3-202, Transcript of Protein Shroom3, mousemouse

TSL 1 (best) BASIC

Gene Shroom3, Length 6,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-202ENSMUST00000113054 Wdfy4E9Q2M9 3149 aa7.83□□□□□ -1.16
Shroom3-202ENSMUST00000113054 Dchs2A0A0A6YW72 3346 aa7.83□□□□□ -1.16
Shroom3-202ENSMUST00000113054 FcgbpE9Q0B5 2583 aa7.82□□□□□ -1.16
Shroom3-202ENSMUST00000113054 Ndufaf8A2AMZ4 74 aa7.82□□□□□ -1.16
Shroom3-202ENSMUST00000113054 Srrm2Q8BTI8 2703 aaKnown RBP7.75□□□□□ -1.17
Shroom3-202ENSMUST00000113054 Tnp1P10856 55 aa7.75□□□□□ -1.17
Shroom3-202ENSMUST00000113054 ApcQ61315 2845 aa7.73□□□□□ -1.17
Shroom3-202ENSMUST00000113054 A930033H14RikG5E8X6 103 aa7.73□□□□□ -1.17
Shroom3-202ENSMUST00000113054 FrylF8VQ05 3007 aa7.73□□□□□ -1.17
Shroom3-202ENSMUST00000113054 Dmxl2Q8BPN8 3032 aa7.72□□□□□ -1.17
Shroom3-202ENSMUST00000113054 Tex15F8VPN2 2785 aa7.71□□□□□ -1.18
Shroom3-202ENSMUST00000113054 Tenm4Q3UHK6 2771 aa7.69□□□□□ -1.18
Shroom3-202ENSMUST00000113054 NbeaQ9EPN1 2936 aa7.69□□□□□ -1.18
Shroom3-202ENSMUST00000113054 Gm9918Q8BUR5 174 aa7.68□□□□□ -1.18
Shroom3-202ENSMUST00000113054 Gm9736A0A1W2P7N1 277 aa7.68□□□□□ -1.18
Shroom3-202ENSMUST00000113054 Zzef1Q5SSH7 2924 aa7.67□□□□□ -1.18
Shroom3-202ENSMUST00000113054 Dchs1E9PVD3 3291 aa7.67□□□□□ -1.18
Shroom3-202ENSMUST00000113054 TgO08710 2766 aa7.65□□□□□ -1.19
Shroom3-202ENSMUST00000113054 Myo15aQ9QZZ4 3511 aa7.64□□□□□ -1.19
Shroom3-202ENSMUST00000113054 DspE9Q557 2883 aaKnown RBP7.63□□□□□ -1.19
Shroom3-202ENSMUST00000113054 SmcpP15265 143 aa7.57□□□□□ -1.2
Shroom3-202ENSMUST00000113054 VcanQ62059 3357 aa7.56□□□□□ -1.2
Shroom3-202ENSMUST00000113054 Gm10318A0A1W2P728 225 aa7.55□□□□□ -1.2
Shroom3-202ENSMUST00000113054 SpegQ62407 3262 aa7.52□□□□□ -1.21
Shroom3-202ENSMUST00000113054 Gm20537G3UYK7 97 aa7.51□□□□□ -1.21
Shroom3-202ENSMUST00000113054 Gm9112A2AI92 75 aa7.49□□□□□ -1.21
Shroom3-202ENSMUST00000113054 Celsr2Q9R0M0 2920 aa7.48□□□□□ -1.21
Shroom3-202ENSMUST00000113054 LrbaQ9ESE1 2856 aa7.47□□□□□ -1.21
Shroom3-202ENSMUST00000113054 B930094E09RikQ8C4T2 136 aa7.45□□□□□ -1.22
Shroom3-202ENSMUST00000113054 FlncQ8VHX6 2726 aaKnown RBP7.43□□□□□ -1.22
Shroom3-202ENSMUST00000113054 Akap9Q70FJ1 3797 aa7.42□□□□□ -1.22
Shroom3-202ENSMUST00000113054 Pdzd2E9Q1M1 2796 aa7.39□□□□□ -1.23
Shroom3-202ENSMUST00000113054 Trank1Q8BV79 2999 aa7.39□□□□□ -1.23
Shroom3-202ENSMUST00000113054 Prm2P07978 107 aa7.39□□□□□ -1.23
Shroom3-202ENSMUST00000113054 Vps13cQ8BX70 3748 aa7.38□□□□□ -1.23
Shroom3-202ENSMUST00000113054 Nf1Q04690 2841 aa7.37□□□□□ -1.23
Shroom3-202ENSMUST00000113054 Chd9Q8BYH8 2885 aa7.37□□□□□ -1.23
Shroom3-202ENSMUST00000113054 Gm40193A0A1B0GT39 78 aa7.35□□□□□ -1.23
Shroom3-202ENSMUST00000113054 Wdfy3Q6VNB8 3508 aa7.35□□□□□ -1.23
Shroom3-202ENSMUST00000113054 RelnQ60841 3461 aa7.35□□□□□ -1.23
Shroom3-202ENSMUST00000113054 Tenm2Q9WTS5 2764 aa7.31□□□□□ -1.24
Shroom3-202ENSMUST00000113054 Crct1Q6PAI5 102 aa7.29□□□□□ -1.24
Shroom3-202ENSMUST00000113054 Muc5acE9QAQ8 3455 aa7.29□□□□□ -1.24
Shroom3-202ENSMUST00000113054 Tenm1Q9WTS4 2731 aa7.29□□□□□ -1.24
Shroom3-202ENSMUST00000113054 Tenm3Q9WTS6 2715 aa7.24□□□□□ -1.25
Shroom3-202ENSMUST00000113054 2310079G19RikQ9D6L6 185 aa7.2□□□□□ -1.26
Shroom3-202ENSMUST00000113054 Csmd1Q923L3 3564 aa7.15□□□□□ -1.27
Shroom3-202ENSMUST00000113054 DmdP11531 3678 aa7.14□□□□□ -1.27
Shroom3-202ENSMUST00000113054 Gm17416Q30KP4 66 aa7.11□□□□□ -1.27
Shroom3-202ENSMUST00000113054 Smg1Q8BKX6 3658 aaKnown RBP7.06□□□□□ -1.28
Shroom3-202ENSMUST00000113054 2210017I01RikA0A0A6YVV1 95 aa7.06□□□□□ -1.28
Shroom3-202ENSMUST00000113054 Helz2E9QAM5 2947 aaKnown RBP7.01□□□□□ -1.29
Shroom3-202ENSMUST00000113054 OtogO55225 2910 aa7□□□□□ -1.29
Shroom3-202ENSMUST00000113054 4933428G20RikQ9D3X4 101 aa7□□□□□ -1.29
Shroom3-202ENSMUST00000113054 Gm19668J3QMD1 248 aa6.97□□□□□ -1.29
Shroom3-202ENSMUST00000113054 Krtap19-5O08632 62 aa6.97□□□□□ -1.29
Shroom3-202ENSMUST00000113054 Lama5Q61001 3718 aa6.92□□□□□ -1.3
Shroom3-202ENSMUST00000113054 Megf8P60882 2789 aa6.91□□□□□ -1.3
Shroom3-202ENSMUST00000113054 Krtap13-1Q8K198 168 aa6.88□□□□□ -1.31
Shroom3-202ENSMUST00000113054 VwfQ8CIZ8 2813 aa6.87□□□□□ -1.31
Shroom3-202ENSMUST00000113054 Gm17402F6Z0L5 76 aa6.83□□□□□ -1.32
Shroom3-202ENSMUST00000113054 Zfhx4Q9JJN2 3550 aa6.81□□□□□ -1.32
Shroom3-202ENSMUST00000113054 Gm11939A2A592 99 aa6.79□□□□□ -1.32
Shroom3-202ENSMUST00000113054 SpenQ62504 3644 aaKnown RBP6.75□□□□□ -1.33
Shroom3-202ENSMUST00000113054 Gm6358A0A087WPH4 74 aa6.75□□□□□ -1.33
Shroom3-202ENSMUST00000113054 Cmya5Q70KF4 3739 aa6.7□□□□□ -1.34
Shroom3-202ENSMUST00000113054 Col7a1Q63870 2944 aa6.65□□□□□ -1.35
Shroom3-202ENSMUST00000113054 Gm884A2A9H6 3643 aa6.62□□□□□ -1.35
Shroom3-202ENSMUST00000113054 Fbn1Q61554 2873 aaKnown RBP6.62□□□□□ -1.35
Shroom3-202ENSMUST00000113054 Csmd2V9GX34 3611 aa6.61□□□□□ -1.35
Shroom3-202ENSMUST00000113054 Svep1A2AVA0 3567 aa6.59□□□□□ -1.35
Shroom3-202ENSMUST00000113054 Krtap3-1A2A591 98 aa6.56□□□□□ -1.36
Shroom3-202ENSMUST00000113054 Ank2Q8C8R3 3898 aa6.51□□□□□ -1.37
Shroom3-202ENSMUST00000113054 Gm18596A0A1W2P860 280 aa6.51□□□□□ -1.37
Shroom3-202ENSMUST00000113054 Sprr2kO70562 68 aa6.48□□□□□ -1.37
Shroom3-202ENSMUST00000113054 Krtap3-2Q9D638 99 aa6.39□□□□□ -1.39
Shroom3-202ENSMUST00000113054 Krtap3-3Q9D7P0 99 aa6.39□□□□□ -1.39
Shroom3-202ENSMUST00000113054 Huwe1Q7TMY8 4377 aaKnown RBP6.39□□□□□ -1.39
Shroom3-202ENSMUST00000113054 LorP18165 486 aa6.38□□□□□ -1.39
Shroom3-202ENSMUST00000113054 Krtap8-1O08633 61 aa6.38□□□□□ -1.39
Shroom3-202ENSMUST00000113054 Muc4Q8JZM8 3443 aa6.32□□□□□ -1.4
Shroom3-202ENSMUST00000113054 LystP97412 3788 aa6.31□□□□□ -1.4
Shroom3-202ENSMUST00000113054 Dnah14A0A140LIJ4 4489 aa6.3□□□□□ -1.4
Shroom3-202ENSMUST00000113054 Krtap7-1Q9D3I6 87 aa6.28□□□□□ -1.4
Shroom3-202ENSMUST00000113054 Gm19402J3QJV4 266 aa6.26□□□□□ -1.41
Shroom3-202ENSMUST00000113054 Muc6Q80T03 2850 aa6.25□□□□□ -1.41
Shroom3-202ENSMUST00000113054 Krtap19-9aF8WH65 55 aa6.23□□□□□ -1.41
Shroom3-202ENSMUST00000113054 Dnah10D3YYQ8 4591 aa6.15□□□□□ -1.42
Shroom3-202ENSMUST00000113054 Krtap1-5A2A590 122 aa6.13□□□□□ -1.43
Shroom3-202ENSMUST00000113054 Csmd3Q80T79 3707 aa6.1□□□□□ -1.43
Shroom3-202ENSMUST00000113054 Krtap1-4Q3V2D6 188 aa6.07□□□□□ -1.44
Shroom3-202ENSMUST00000113054 Sprr2gO70558 76 aa6.07□□□□□ -1.44
Shroom3-202ENSMUST00000113054 CubnQ9JLB4 3623 aa6.06□□□□□ -1.44
Shroom3-202ENSMUST00000113054 Sprr2a3Q4KL71 83 aa6.04□□□□□ -1.44
Shroom3-202ENSMUST00000113054 Sprr2a1Q9CQK8 83 aa6.04□□□□□ -1.44
Shroom3-202ENSMUST00000113054 Hspg2Q05793 3707 aaKnown RBP6.02□□□□□ -1.44
Shroom3-202ENSMUST00000113054 Dnah5Q8VHE6 4621 aa5.99□□□□□ -1.45
Shroom3-202ENSMUST00000113054 Krtap19-9bQ99NG9 58 aa5.95□□□□□ -1.46
Shroom3-202ENSMUST00000113054 Krtap12-1Q9Z287 130 aa5.92□□□□□ -1.46
Shroom3-202ENSMUST00000113054 Lce1mQ9CR91 182 aa5.84□□□□□ -1.47
Retrieved 100 of 22,080 RNA–protein pairs in 51.4 ms