RNA–Protein interactions for RNA: ENSMUST00000113051.8

Shroom3-201, Transcript of Protein Shroom3, mousemouse

TSL 1 (best) BASIC

Gene Shroom3, Length 6,435 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-201ENSMUST00000113051 Igfn1Q3KNY0 2849 aa9.01□□□□□ -0.97
Shroom3-201ENSMUST00000113051 Hivep1Q03172 2688 aa8.99□□□□□ -0.97
Shroom3-201ENSMUST00000113051 Utp20Q5XG71 2788 aaKnown RBP8.99□□□□□ -0.97
Shroom3-201ENSMUST00000113051 FrylF8VQ05 3007 aa8.95□□□□□ -0.98
Shroom3-201ENSMUST00000113051 A930033H14RikG5E8X6 103 aa8.95□□□□□ -0.98
Shroom3-201ENSMUST00000113051 Myo15aQ9QZZ4 3511 aa8.95□□□□□ -0.98
Shroom3-201ENSMUST00000113051 Gm9918Q8BUR5 174 aa8.94□□□□□ -0.98
Shroom3-201ENSMUST00000113051 Dchs1E9PVD3 3291 aa8.93□□□□□ -0.98
Shroom3-201ENSMUST00000113051 FcgbpE9Q0B5 2583 aa8.93□□□□□ -0.98
Shroom3-201ENSMUST00000113051 Gm9736A0A1W2P7N1 277 aa8.92□□□□□ -0.98
Shroom3-201ENSMUST00000113051 Tnp1P10856 55 aa8.91□□□□□ -0.98
Shroom3-201ENSMUST00000113051 Dmxl2Q8BPN8 3032 aa8.88□□□□□ -0.99
Shroom3-201ENSMUST00000113051 Tex15F8VPN2 2785 aa8.85□□□□□ -0.99
Shroom3-201ENSMUST00000113051 VcanQ62059 3357 aa8.84□□□□□ -0.99
Shroom3-201ENSMUST00000113051 ApcQ61315 2845 aa8.83□□□□□ -1
Shroom3-201ENSMUST00000113051 Gm9112A2AI92 75 aa8.82□□□□□ -1
Shroom3-201ENSMUST00000113051 NbeaQ9EPN1 2936 aa8.82□□□□□ -1
Shroom3-201ENSMUST00000113051 Srrm2Q8BTI8 2703 aaKnown RBP8.82□□□□□ -1
Shroom3-201ENSMUST00000113051 Tenm4Q3UHK6 2771 aa8.81□□□□□ -1
Shroom3-201ENSMUST00000113051 Gm10318A0A1W2P728 225 aa8.8□□□□□ -1
Shroom3-201ENSMUST00000113051 Zzef1Q5SSH7 2924 aa8.78□□□□□ -1
Shroom3-201ENSMUST00000113051 SmcpP15265 143 aa8.75□□□□□ -1.01
Shroom3-201ENSMUST00000113051 SpegQ62407 3262 aa8.74□□□□□ -1.01
Shroom3-201ENSMUST00000113051 TgO08710 2766 aa8.72□□□□□ -1.01
Shroom3-201ENSMUST00000113051 DspE9Q557 2883 aaKnown RBP8.72□□□□□ -1.01
Shroom3-201ENSMUST00000113051 Vps13cQ8BX70 3748 aa8.71□□□□□ -1.01
Shroom3-201ENSMUST00000113051 Akap9Q70FJ1 3797 aa8.71□□□□□ -1.02
Shroom3-201ENSMUST00000113051 Wdfy3Q6VNB8 3508 aa8.68□□□□□ -1.02
Shroom3-201ENSMUST00000113051 Gm20537G3UYK7 97 aa8.62□□□□□ -1.03
Shroom3-201ENSMUST00000113051 B930094E09RikQ8C4T2 136 aa8.56□□□□□ -1.04
Shroom3-201ENSMUST00000113051 RelnQ60841 3461 aa8.56□□□□□ -1.04
Shroom3-201ENSMUST00000113051 Prm2P07978 107 aa8.55□□□□□ -1.04
Shroom3-201ENSMUST00000113051 LrbaQ9ESE1 2856 aa8.55□□□□□ -1.04
Shroom3-201ENSMUST00000113051 Celsr2Q9R0M0 2920 aa8.52□□□□□ -1.05
Shroom3-201ENSMUST00000113051 Gm40193A0A1B0GT39 78 aa8.51□□□□□ -1.05
Shroom3-201ENSMUST00000113051 Crct1Q6PAI5 102 aa8.5□□□□□ -1.05
Shroom3-201ENSMUST00000113051 Trank1Q8BV79 2999 aa8.46□□□□□ -1.05
Shroom3-201ENSMUST00000113051 Muc5acE9QAQ8 3455 aa8.45□□□□□ -1.06
Shroom3-201ENSMUST00000113051 FlncQ8VHX6 2726 aaKnown RBP8.41□□□□□ -1.06
Shroom3-201ENSMUST00000113051 Pdzd2E9Q1M1 2796 aa8.4□□□□□ -1.06
Shroom3-201ENSMUST00000113051 Nf1Q04690 2841 aa8.4□□□□□ -1.06
Shroom3-201ENSMUST00000113051 DmdP11531 3678 aa8.39□□□□□ -1.07
Shroom3-201ENSMUST00000113051 Csmd1Q923L3 3564 aa8.39□□□□□ -1.07
Shroom3-201ENSMUST00000113051 Chd9Q8BYH8 2885 aa8.39□□□□□ -1.07
Shroom3-201ENSMUST00000113051 Tenm2Q9WTS5 2764 aa8.37□□□□□ -1.07
Shroom3-201ENSMUST00000113051 Smg1Q8BKX6 3658 aaKnown RBP8.33□□□□□ -1.08
Shroom3-201ENSMUST00000113051 Tenm1Q9WTS4 2731 aa8.28□□□□□ -1.08
Shroom3-201ENSMUST00000113051 Tenm3Q9WTS6 2715 aa8.27□□□□□ -1.09
Shroom3-201ENSMUST00000113051 2310079G19RikQ9D6L6 185 aa8.24□□□□□ -1.09
Shroom3-201ENSMUST00000113051 Lama5Q61001 3718 aa8.14□□□□□ -1.11
Shroom3-201ENSMUST00000113051 Gm17416Q30KP4 66 aa8.13□□□□□ -1.11
Shroom3-201ENSMUST00000113051 4933428G20RikQ9D3X4 101 aa8.1□□□□□ -1.11
Shroom3-201ENSMUST00000113051 2210017I01RikA0A0A6YVV1 95 aa8.08□□□□□ -1.12
Shroom3-201ENSMUST00000113051 Krtap19-5O08632 62 aa8.05□□□□□ -1.12
Shroom3-201ENSMUST00000113051 OtogO55225 2910 aa8.04□□□□□ -1.12
Shroom3-201ENSMUST00000113051 Zfhx4Q9JJN2 3550 aa8.03□□□□□ -1.12
Shroom3-201ENSMUST00000113051 Gm19668J3QMD1 248 aa8.03□□□□□ -1.12
Shroom3-201ENSMUST00000113051 Helz2E9QAM5 2947 aaKnown RBP7.97□□□□□ -1.13
Shroom3-201ENSMUST00000113051 Krtap13-1Q8K198 168 aa7.93□□□□□ -1.14
Shroom3-201ENSMUST00000113051 Cmya5Q70KF4 3739 aa7.91□□□□□ -1.14
Shroom3-201ENSMUST00000113051 SpenQ62504 3644 aaKnown RBP7.91□□□□□ -1.14
Shroom3-201ENSMUST00000113051 Megf8P60882 2789 aa7.87□□□□□ -1.15
Shroom3-201ENSMUST00000113051 Gm884A2A9H6 3643 aa7.87□□□□□ -1.15
Shroom3-201ENSMUST00000113051 VwfQ8CIZ8 2813 aa7.84□□□□□ -1.15
Shroom3-201ENSMUST00000113051 Gm6358A0A087WPH4 74 aa7.84□□□□□ -1.15
Shroom3-201ENSMUST00000113051 Gm17402F6Z0L5 76 aa7.81□□□□□ -1.16
Shroom3-201ENSMUST00000113051 Gm11939A2A592 99 aa7.79□□□□□ -1.16
Shroom3-201ENSMUST00000113051 Csmd2V9GX34 3611 aa7.79□□□□□ -1.16
Shroom3-201ENSMUST00000113051 Svep1A2AVA0 3567 aa7.76□□□□□ -1.17
Shroom3-201ENSMUST00000113051 Ank2Q8C8R3 3898 aa7.65□□□□□ -1.18
Shroom3-201ENSMUST00000113051 Fbn1Q61554 2873 aaKnown RBP7.62□□□□□ -1.19
Shroom3-201ENSMUST00000113051 Col7a1Q63870 2944 aa7.62□□□□□ -1.19
Shroom3-201ENSMUST00000113051 Gm18596A0A1W2P860 280 aa7.6□□□□□ -1.19
Shroom3-201ENSMUST00000113051 Sprr2kO70562 68 aa7.55□□□□□ -1.2
Shroom3-201ENSMUST00000113051 Krtap3-1A2A591 98 aa7.52□□□□□ -1.21
Shroom3-201ENSMUST00000113051 Huwe1Q7TMY8 4377 aaKnown RBP7.49□□□□□ -1.21
Shroom3-201ENSMUST00000113051 LorP18165 486 aa7.41□□□□□ -1.22
Shroom3-201ENSMUST00000113051 Muc4Q8JZM8 3443 aa7.4□□□□□ -1.22
Shroom3-201ENSMUST00000113051 Krtap8-1O08633 61 aa7.39□□□□□ -1.23
Shroom3-201ENSMUST00000113051 LystP97412 3788 aa7.37□□□□□ -1.23
Shroom3-201ENSMUST00000113051 Dnah14A0A140LIJ4 4489 aa7.34□□□□□ -1.23
Shroom3-201ENSMUST00000113051 Krtap3-2Q9D638 99 aa7.31□□□□□ -1.24
Shroom3-201ENSMUST00000113051 Krtap3-3Q9D7P0 99 aa7.31□□□□□ -1.24
Shroom3-201ENSMUST00000113051 Gm19402J3QJV4 266 aa7.29□□□□□ -1.24
Shroom3-201ENSMUST00000113051 Krtap7-1Q9D3I6 87 aa7.25□□□□□ -1.25
Shroom3-201ENSMUST00000113051 Krtap19-9aF8WH65 55 aa7.18□□□□□ -1.26
Shroom3-201ENSMUST00000113051 Csmd3Q80T79 3707 aa7.16□□□□□ -1.26
Shroom3-201ENSMUST00000113051 Dnah10D3YYQ8 4591 aa7.14□□□□□ -1.27
Shroom3-201ENSMUST00000113051 Muc6Q80T03 2850 aa7.14□□□□□ -1.27
Shroom3-201ENSMUST00000113051 Hspg2Q05793 3707 aaKnown RBP7.11□□□□□ -1.27
Shroom3-201ENSMUST00000113051 CubnQ9JLB4 3623 aa7.09□□□□□ -1.27
Shroom3-201ENSMUST00000113051 Sprr2gO70558 76 aa7.07□□□□□ -1.28
Shroom3-201ENSMUST00000113051 Krtap1-5A2A590 122 aa7.04□□□□□ -1.28
Shroom3-201ENSMUST00000113051 Krtap1-4Q3V2D6 188 aa7□□□□□ -1.29
Shroom3-201ENSMUST00000113051 BsnO88737 3942 aa6.92□□□□□ -1.3
Shroom3-201ENSMUST00000113051 Dnah5Q8VHE6 4621 aa6.92□□□□□ -1.3
Shroom3-201ENSMUST00000113051 Sprr2a3Q4KL71 83 aa6.92□□□□□ -1.3
Shroom3-201ENSMUST00000113051 Sprr2a1Q9CQK8 83 aa6.92□□□□□ -1.3
Shroom3-201ENSMUST00000113051 Krtap19-9bQ99NG9 58 aa6.84□□□□□ -1.31
Shroom3-201ENSMUST00000113051 Krtap12-1Q9Z287 130 aa6.82□□□□□ -1.32
Retrieved 100 of 22,080 RNA–protein pairs in 92.7 ms