RNA–Protein interactions for RNA: ENSMUST00000112366.7

Scn1a-203, Transcript of Sodium channel protein type 1 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn1a, Length 8,386 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1a-203ENSMUST00000112366 Gm7173A0A0G2JEB6 3132 aa2.76□□□□□ -1.97
Scn1a-203ENSMUST00000112366 2210017I01RikA0A0A6YVV1 95 aa2.76□□□□□ -1.97
Scn1a-203ENSMUST00000112366 Zzef1Q5SSH7 2924 aa2.75□□□□□ -1.97
Scn1a-203ENSMUST00000112366 Gm19668J3QMD1 248 aa2.74□□□□□ -1.97
Scn1a-203ENSMUST00000112366 A0A1Y7VJ07 166 aa2.74□□□□□ -1.97
Scn1a-203ENSMUST00000112366 Szt2A2A9C3 3431 aa2.73□□□□□ -1.97
Scn1a-203ENSMUST00000112366 Gm9918Q8BUR5 174 aa2.73□□□□□ -1.97
Scn1a-203ENSMUST00000112366 Tenm1Q9WTS4 2731 aa2.72□□□□□ -1.97
Scn1a-203ENSMUST00000112366 Mki67E9PVX6 3177 aaKnown RBP2.72□□□□□ -1.97
Scn1a-203ENSMUST00000112366 Gm2696A0A1W2P709 240 aa2.72□□□□□ -1.97
Scn1a-203ENSMUST00000112366 KalrnA2CG49 2964 aa2.72□□□□□ -1.97
Scn1a-203ENSMUST00000112366 Fbn2Q61555 2907 aa2.72□□□□□ -1.97
Scn1a-203ENSMUST00000112366 Myo15aQ9QZZ4 3511 aa2.71□□□□□ -1.98
Scn1a-203ENSMUST00000112366 Dmxl1Q6PNC0 3013 aa2.71□□□□□ -1.98
Scn1a-203ENSMUST00000112366 Chd7A2AJK6 2986 aaKnown RBP2.71□□□□□ -1.98
Scn1a-203ENSMUST00000112366 LrbaQ9ESE1 2856 aa2.71□□□□□ -1.98
Scn1a-203ENSMUST00000112366 DspE9Q557 2883 aaKnown RBP2.7□□□□□ -1.98
Scn1a-203ENSMUST00000112366 Pdzd2E9Q1M1 2796 aa2.7□□□□□ -1.98
Scn1a-203ENSMUST00000112366 Tenm3Q9WTS6 2715 aa2.7□□□□□ -1.98
Scn1a-203ENSMUST00000112366 MgaA2AWL7 3003 aaKnown RBP2.69□□□□□ -1.98
Scn1a-203ENSMUST00000112366 Bod1lE9Q6J5 3032 aa2.69□□□□□ -1.98
Scn1a-203ENSMUST00000112366 Zfhx3Q61329 3726 aa2.68□□□□□ -1.98
Scn1a-203ENSMUST00000112366 HttP42859 3119 aa2.67□□□□□ -1.98
Scn1a-203ENSMUST00000112366 Chd9Q8BYH8 2885 aa2.67□□□□□ -1.98
Scn1a-203ENSMUST00000112366 BptfA2A654 3036 aaKnown RBP2.66□□□□□ -1.98
Scn1a-203ENSMUST00000112366 Akap9Q70FJ1 3797 aa2.66□□□□□ -1.98
Scn1a-203ENSMUST00000112366 Col12a1Q60847 3120 aa2.66□□□□□ -1.98
Scn1a-203ENSMUST00000112366 Cfap54Q8C6S9 3106 aa2.65□□□□□ -1.99
Scn1a-203ENSMUST00000112366 Ranbp2Q9ERU9 3053 aaKnown RBP2.64□□□□□ -1.99
Scn1a-203ENSMUST00000112366 Nf1Q04690 2841 aa2.63□□□□□ -1.99
Scn1a-203ENSMUST00000112366 Rev3lQ61493 3122 aa2.63□□□□□ -1.99
Scn1a-203ENSMUST00000112366 Zfhx4Q9JJN2 3550 aa2.63□□□□□ -1.99
Scn1a-203ENSMUST00000112366 DmdP11531 3678 aa2.63□□□□□ -1.99
Scn1a-203ENSMUST00000112366 Igfn1Q3KNY0 2849 aa2.62□□□□□ -1.99
Scn1a-203ENSMUST00000112366 FryE9Q8I9 3020 aa2.62□□□□□ -1.99
Scn1a-203ENSMUST00000112366 AspmQ8CJ27 3122 aa2.61□□□□□ -1.99
Scn1a-203ENSMUST00000112366 AtmQ62388 3066 aa2.61□□□□□ -1.99
Scn1a-203ENSMUST00000112366 Vps13aQ5H8C4 3166 aa2.61□□□□□ -1.99
Scn1a-203ENSMUST00000112366 SpegQ62407 3262 aa2.6□□□□□ -1.99
Scn1a-203ENSMUST00000112366 Dchs2A0A0A6YW72 3346 aa2.6□□□□□ -1.99
Scn1a-203ENSMUST00000112366 Krtap13-1Q8K198 168 aa2.6□□□□□ -1.99
Scn1a-203ENSMUST00000112366 FrylF8VQ05 3007 aa2.59□□□□□ -1.99
Scn1a-203ENSMUST00000112366 RelnQ60841 3461 aa2.59□□□□□ -1.99
Scn1a-203ENSMUST00000112366 Lama1P19137 3084 aa2.59□□□□□ -2
Scn1a-203ENSMUST00000112366 Unc80Q8BLN6 3261 aa2.57□□□□□ -2
Scn1a-203ENSMUST00000112366 Frem2Q6NVD0 3160 aa2.56□□□□□ -2
Scn1a-203ENSMUST00000112366 Col6a3E9PWQ3 3284 aa2.56□□□□□ -2
Scn1a-203ENSMUST00000112366 Celsr1O35161 3034 aa2.56□□□□□ -2
Scn1a-203ENSMUST00000112366 NbeaQ9EPN1 2936 aa2.53□□□□□ -2
Scn1a-203ENSMUST00000112366 Brca2P97929 3329 aa2.53□□□□□ -2
Scn1a-203ENSMUST00000112366 Wdfy4E9Q2M9 3149 aa2.52□□□□□ -2.01
Scn1a-203ENSMUST00000112366 Dmxl2Q8BPN8 3032 aa2.51□□□□□ -2.01
Scn1a-203ENSMUST00000112366 Lrrc37aB1AWG4 3215 aa2.51□□□□□ -2.01
Scn1a-203ENSMUST00000112366 Gm884A2A9H6 3643 aa2.51□□□□□ -2.01
Scn1a-203ENSMUST00000112366 Gm18596A0A1W2P860 280 aa2.51□□□□□ -2.01
Scn1a-203ENSMUST00000112366 Vps13cQ8BX70 3748 aa2.51□□□□□ -2.01
Scn1a-203ENSMUST00000112366 Celsr2Q9R0M0 2920 aa2.5□□□□□ -2.01
Scn1a-203ENSMUST00000112366 Gm9736A0A1W2P7N1 277 aa2.5□□□□□ -2.01
Scn1a-203ENSMUST00000112366 SpenQ62504 3644 aaKnown RBP2.5□□□□□ -2.01
Scn1a-203ENSMUST00000112366 Tenm2Q9WTS5 2764 aa2.5□□□□□ -2.01
Scn1a-203ENSMUST00000112366 Gm6358A0A087WPH4 74 aa2.5□□□□□ -2.01
Scn1a-203ENSMUST00000112366 Trank1Q8BV79 2999 aa2.48□□□□□ -2.01
Scn1a-203ENSMUST00000112366 Adgrg4B7ZCC9 3073 aa2.48□□□□□ -2.01
Scn1a-203ENSMUST00000112366 Celsr3Q91ZI0 3301 aa2.47□□□□□ -2.01
Scn1a-203ENSMUST00000112366 Krtap3-1A2A591 98 aa2.47□□□□□ -2.01
Scn1a-203ENSMUST00000112366 Tenm4Q3UHK6 2771 aa2.46□□□□□ -2.02
Scn1a-203ENSMUST00000112366 VwfQ8CIZ8 2813 aa2.45□□□□□ -2.02
Scn1a-203ENSMUST00000112366 Gm11939A2A592 99 aa2.45□□□□□ -2.02
Scn1a-203ENSMUST00000112366 Gm19402J3QJV4 266 aa2.45□□□□□ -2.02
Scn1a-203ENSMUST00000112366 Csmd1Q923L3 3564 aa2.45□□□□□ -2.02
Scn1a-203ENSMUST00000112366 Smg1Q8BKX6 3658 aaKnown RBP2.43□□□□□ -2.02
Scn1a-203ENSMUST00000112366 Krtap7-1Q9D3I6 87 aa2.42□□□□□ -2.02
Scn1a-203ENSMUST00000112366 Gm10318A0A1W2P728 225 aa2.42□□□□□ -2.02
Scn1a-203ENSMUST00000112366 Cmya5Q70KF4 3739 aa2.4□□□□□ -2.03
Scn1a-203ENSMUST00000112366 Helz2E9QAM5 2947 aaKnown RBP2.38□□□□□ -2.03
Scn1a-203ENSMUST00000112366 Krtap3-2Q9D638 99 aa2.37□□□□□ -2.03
Scn1a-203ENSMUST00000112366 Krtap3-3Q9D7P0 99 aa2.37□□□□□ -2.03
Scn1a-203ENSMUST00000112366 Muc5acE9QAQ8 3455 aa2.37□□□□□ -2.03
Scn1a-203ENSMUST00000112366 Crct1Q6PAI5 102 aa2.36□□□□□ -2.03
Scn1a-203ENSMUST00000112366 Dchs1E9PVD3 3291 aa2.36□□□□□ -2.03
Scn1a-203ENSMUST00000112366 Sprr2a3Q4KL71 83 aa2.35□□□□□ -2.03
Scn1a-203ENSMUST00000112366 Sprr2a1Q9CQK8 83 aa2.35□□□□□ -2.03
Scn1a-203ENSMUST00000112366 OtogO55225 2910 aa2.35□□□□□ -2.03
Scn1a-203ENSMUST00000112366 CubnQ9JLB4 3623 aa2.35□□□□□ -2.03
Scn1a-203ENSMUST00000112366 Krtap8-1O08633 61 aa2.35□□□□□ -2.03
Scn1a-203ENSMUST00000112366 Csmd2V9GX34 3611 aa2.35□□□□□ -2.03
Scn1a-203ENSMUST00000112366 Svep1A2AVA0 3567 aa2.34□□□□□ -2.03
Scn1a-203ENSMUST00000112366 Krtap19-9bQ99NG9 58 aa2.33□□□□□ -2.04
Scn1a-203ENSMUST00000112366 A030014E15RikA0A1Y7VJV2 120 aa2.32□□□□□ -2.04
Scn1a-203ENSMUST00000112366 Krtap19-9aF8WH65 55 aa2.32□□□□□ -2.04
Scn1a-203ENSMUST00000112366 Ryr1E9PZQ0 5035 aa2.31□□□□□ -2.04
Scn1a-203ENSMUST00000112366 Krtap12-1Q9Z287 130 aa2.3□□□□□ -2.04
Scn1a-203ENSMUST00000112366 Krtap19-5O08632 62 aa2.29□□□□□ -2.04
Scn1a-203ENSMUST00000112366 Sprr2kO70562 68 aa2.28□□□□□ -2.04
Scn1a-203ENSMUST00000112366 Krtap1-5A2A590 122 aa2.27□□□□□ -2.05
Scn1a-203ENSMUST00000112366 Muc4Q8JZM8 3443 aa2.26□□□□□ -2.05
Scn1a-203ENSMUST00000112366 Herc1E9PZP8 4859 aa2.24□□□□□ -2.05
Scn1a-203ENSMUST00000112366 Col7a1Q63870 2944 aa2.24□□□□□ -2.05
Scn1a-203ENSMUST00000112366 Fbn1Q61554 2873 aaKnown RBP2.21□□□□□ -2.06
Scn1a-203ENSMUST00000112366 A0A286YCP9 139 aa2.21□□□□□ -2.06
Retrieved 100 of 22,080 RNA–protein pairs in 66.3 ms