RNA–Protein interactions for RNA: ENSMUST00000112298.9

Ssh1-202, Transcript of Protein phosphatase Slingshot homolog 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ssh1, Length 5,584 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssh1-202ENSMUST00000112298 NipblQ6KCD5 2798 aaKnown RBP6.96□□□□□ -1.3
Ssh1-202ENSMUST00000112298 Gm9507D3Z5T3 223 aa6.93□□□□□ -1.3
Ssh1-202ENSMUST00000112298 Lama5Q61001 3718 aa6.92□□□□□ -1.3
Ssh1-202ENSMUST00000112298 Gm21887J3QQ04 176 aa6.89□□□□□ -1.31
Ssh1-202ENSMUST00000112298 Ubr5Q80TP3 2792 aa6.89□□□□□ -1.31
Ssh1-202ENSMUST00000112298 Ndufaf8A2AMZ4 74 aa6.88□□□□□ -1.31
Ssh1-202ENSMUST00000112298 Chd6A3KFM7 2711 aa6.88□□□□□ -1.31
Ssh1-202ENSMUST00000112298 Gm884A2A9H6 3643 aa6.88□□□□□ -1.31
Ssh1-202ENSMUST00000112298 Gm40193A0A1B0GT39 78 aa6.87□□□□□ -1.31
Ssh1-202ENSMUST00000112298 Muc5acE9QAQ8 3455 aa6.84□□□□□ -1.31
Ssh1-202ENSMUST00000112298 Igsf10Q3V1M1 2594 aa6.83□□□□□ -1.32
Ssh1-202ENSMUST00000112298 9530053A07RikE9PVG8 2581 aa6.82□□□□□ -1.32
Ssh1-202ENSMUST00000112298 Igfn1Q3KNY0 2849 aa6.81□□□□□ -1.32
Ssh1-202ENSMUST00000112298 Hivep1Q03172 2688 aa6.81□□□□□ -1.32
Ssh1-202ENSMUST00000112298 Col6a5A6H584 2640 aa6.81□□□□□ -1.32
Ssh1-202ENSMUST00000112298 Krtap10-4Q08EG8 221 aa6.8□□□□□ -1.32
Ssh1-202ENSMUST00000112298 Tnp1P10856 55 aa6.79□□□□□ -1.32
Ssh1-202ENSMUST00000112298 Celsr2Q9R0M0 2920 aa6.79□□□□□ -1.32
Ssh1-202ENSMUST00000112298 LrbaQ9ESE1 2856 aa6.78□□□□□ -1.32
Ssh1-202ENSMUST00000112298 Smg1Q8BKX6 3658 aaKnown RBP6.78□□□□□ -1.32
Ssh1-202ENSMUST00000112298 SpenQ62504 3644 aaKnown RBP6.77□□□□□ -1.33
Ssh1-202ENSMUST00000112298 Stab2Q8R4U0 2559 aa6.74□□□□□ -1.33
Ssh1-202ENSMUST00000112298 Nbeal2Q6ZQA0 2742 aa6.73□□□□□ -1.33
Ssh1-202ENSMUST00000112298 Krtap10-10A0A1W2P7T6 217 aa6.72□□□□□ -1.33
Ssh1-202ENSMUST00000112298 Chd9Q8BYH8 2885 aa6.72□□□□□ -1.33
Ssh1-202ENSMUST00000112298 Tenm4Q3UHK6 2771 aa6.71□□□□□ -1.33
Ssh1-202ENSMUST00000112298 Gm9112A2AI92 75 aa6.7□□□□□ -1.34
Ssh1-202ENSMUST00000112298 Nf1Q04690 2841 aa6.7□□□□□ -1.34
Ssh1-202ENSMUST00000112298 Itpr2Q9Z329 2701 aa6.68□□□□□ -1.34
Ssh1-202ENSMUST00000112298 Tenm3Q9WTS6 2715 aa6.6□□□□□ -1.35
Ssh1-202ENSMUST00000112298 Svep1A2AVA0 3567 aa6.59□□□□□ -1.35
Ssh1-202ENSMUST00000112298 Zfhx3Q61329 3726 aa6.59□□□□□ -1.35
Ssh1-202ENSMUST00000112298 Gm5965D3Z724 196 aa6.59□□□□□ -1.36
Ssh1-202ENSMUST00000112298 Gm20537G3UYK7 97 aa6.58□□□□□ -1.36
Ssh1-202ENSMUST00000112298 Csmd1Q923L3 3564 aa6.58□□□□□ -1.36
Ssh1-202ENSMUST00000112298 Helz2E9QAM5 2947 aaKnown RBP6.57□□□□□ -1.36
Ssh1-202ENSMUST00000112298 Gm2696A0A1W2P709 240 aa6.56□□□□□ -1.36
Ssh1-202ENSMUST00000112298 Pkd1l1Q8R526 2615 aa6.54□□□□□ -1.36
Ssh1-202ENSMUST00000112298 A930033H14RikG5E8X6 103 aa6.53□□□□□ -1.36
Ssh1-202ENSMUST00000112298 Tex15F8VPN2 2785 aa6.53□□□□□ -1.36
Ssh1-202ENSMUST00000112298 B930094E09RikQ8C4T2 136 aa6.53□□□□□ -1.36
Ssh1-202ENSMUST00000112298 FcgbpE9Q0B5 2583 aa6.51□□□□□ -1.37
Ssh1-202ENSMUST00000112298 OtogO55225 2910 aa6.5□□□□□ -1.37
Ssh1-202ENSMUST00000112298 Pdzd2E9Q1M1 2796 aa6.5□□□□□ -1.37
Ssh1-202ENSMUST00000112298 2310057N15RikQ9D6T8 200 aa6.48□□□□□ -1.37
Ssh1-202ENSMUST00000112298 TgO08710 2766 aa6.47□□□□□ -1.37
Ssh1-202ENSMUST00000112298 Cmya5Q70KF4 3739 aa6.46□□□□□ -1.38
Ssh1-202ENSMUST00000112298 Muc4Q8JZM8 3443 aa6.42□□□□□ -1.38
Ssh1-202ENSMUST00000112298 Col7a1Q63870 2944 aa6.42□□□□□ -1.38
Ssh1-202ENSMUST00000112298 2310079G19RikQ9D6L6 185 aa6.42□□□□□ -1.38
Ssh1-202ENSMUST00000112298 Gm17416Q30KP4 66 aa6.4□□□□□ -1.39
Ssh1-202ENSMUST00000112298 Srrm2Q8BTI8 2703 aaKnown RBP6.37□□□□□ -1.39
Ssh1-202ENSMUST00000112298 Gm17402F6Z0L5 76 aa6.33□□□□□ -1.4
Ssh1-202ENSMUST00000112298 Fbn1Q61554 2873 aaKnown RBP6.32□□□□□ -1.4
Ssh1-202ENSMUST00000112298 Csmd2V9GX34 3611 aa6.26□□□□□ -1.41
Ssh1-202ENSMUST00000112298 2210017I01RikA0A0A6YVV1 95 aa6.26□□□□□ -1.41
Ssh1-202ENSMUST00000112298 ApcQ61315 2845 aa6.26□□□□□ -1.41
Ssh1-202ENSMUST00000112298 Tenm1Q9WTS4 2731 aa6.18□□□□□ -1.42
Ssh1-202ENSMUST00000112298 Ank2Q8C8R3 3898 aa6.14□□□□□ -1.43
Ssh1-202ENSMUST00000112298 Prm2P07978 107 aa6.09□□□□□ -1.43
Ssh1-202ENSMUST00000112298 LystP97412 3788 aa6.07□□□□□ -1.44
Ssh1-202ENSMUST00000112298 VwfQ8CIZ8 2813 aa6.07□□□□□ -1.44
Ssh1-202ENSMUST00000112298 4933428G20RikQ9D3X4 101 aa6.03□□□□□ -1.44
Ssh1-202ENSMUST00000112298 Megf8P60882 2789 aa6□□□□□ -1.45
Ssh1-202ENSMUST00000112298 Gm9736A0A1W2P7N1 277 aa6□□□□□ -1.45
Ssh1-202ENSMUST00000112298 Gm19668J3QMD1 248 aa5.99□□□□□ -1.45
Ssh1-202ENSMUST00000112298 CubnQ9JLB4 3623 aa5.97□□□□□ -1.45
Ssh1-202ENSMUST00000112298 BsnO88737 3942 aa5.94□□□□□ -1.46
Ssh1-202ENSMUST00000112298 Muc6Q80T03 2850 aa5.94□□□□□ -1.46
Ssh1-202ENSMUST00000112298 Gm11939A2A592 99 aa5.89□□□□□ -1.47
Ssh1-202ENSMUST00000112298 Gm9918Q8BUR5 174 aa5.89□□□□□ -1.47
Ssh1-202ENSMUST00000112298 Xirp2Q4U4S6 3784 aa5.88□□□□□ -1.47
Ssh1-202ENSMUST00000112298 Tenm2Q9WTS5 2764 aa5.85□□□□□ -1.47
Ssh1-202ENSMUST00000112298 Krtap13-1Q8K198 168 aa5.82□□□□□ -1.48
Ssh1-202ENSMUST00000112298 Krtap3-1A2A591 98 aa5.74□□□□□ -1.49
Ssh1-202ENSMUST00000112298 Krtap19-5O08632 62 aa5.72□□□□□ -1.49
Ssh1-202ENSMUST00000112298 Krtap3-2Q9D638 99 aa5.71□□□□□ -1.5
Ssh1-202ENSMUST00000112298 Krtap3-3Q9D7P0 99 aa5.71□□□□□ -1.5
Ssh1-202ENSMUST00000112298 Gm10318A0A1W2P728 225 aa5.62□□□□□ -1.51
Ssh1-202ENSMUST00000112298 Dnah14A0A140LIJ4 4489 aa5.61□□□□□ -1.51
Ssh1-202ENSMUST00000112298 Hspg2Q05793 3707 aaKnown RBP5.61□□□□□ -1.51
Ssh1-202ENSMUST00000112298 Dnah10D3YYQ8 4591 aa5.54□□□□□ -1.52
Ssh1-202ENSMUST00000112298 Crct1Q6PAI5 102 aa5.54□□□□□ -1.52
Ssh1-202ENSMUST00000112298 TnxbO35452 4006 aa5.44□□□□□ -1.54
Ssh1-202ENSMUST00000112298 Huwe1Q7TMY8 4377 aaKnown RBP5.43□□□□□ -1.54
Ssh1-202ENSMUST00000112298 Sprr2a3Q4KL71 83 aa5.38□□□□□ -1.55
Ssh1-202ENSMUST00000112298 Sprr2a1Q9CQK8 83 aa5.38□□□□□ -1.55
Ssh1-202ENSMUST00000112298 Krtap1-5A2A590 122 aa5.38□□□□□ -1.55
Ssh1-202ENSMUST00000112298 Dnah6E9Q0B6 4144 aa5.33□□□□□ -1.56
Ssh1-202ENSMUST00000112298 Gm6358A0A087WPH4 74 aa5.31□□□□□ -1.56
Ssh1-202ENSMUST00000112298 Krtap19-9aF8WH65 55 aa5.3□□□□□ -1.56
Ssh1-202ENSMUST00000112298 Krtap7-1Q9D3I6 87 aa5.27□□□□□ -1.57
Ssh1-202ENSMUST00000112298 Dnah7bL7N1Y0 4068 aa5.25□□□□□ -1.57
Ssh1-202ENSMUST00000112298 Krtap8-1O08633 61 aa5.22□□□□□ -1.57
Ssh1-202ENSMUST00000112298 PrkdcP97313 4128 aa5.22□□□□□ -1.57
Ssh1-202ENSMUST00000112298 PlecQ9QXS1 4691 aaKnown RBP5.21□□□□□ -1.57
Ssh1-202ENSMUST00000112298 Csmd3Q80T79 3707 aa5.21□□□□□ -1.57
Ssh1-202ENSMUST00000112298 Krtap19-9bQ99NG9 58 aa5.2□□□□□ -1.58
Ssh1-202ENSMUST00000112298 Dnah17Q69Z23 4481 aa5.2□□□□□ -1.58
Ssh1-202ENSMUST00000112298 Krtap1-4Q3V2D6 188 aa5.19□□□□□ -1.58
Retrieved 100 of 22,080 RNA–protein pairs in 143.1 ms