RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Gm3233E9Q2H5 230 aa10.35□□□□□ -0.75
Trim71-201ENSMUST00000111816 Gm11565A2A4M7 156 aa10.34□□□□□ -0.75
Trim71-201ENSMUST00000111816 Lelp1Q9DAE3 120 aa10.34□□□□□ -0.75
Trim71-201ENSMUST00000111816 Gm9508A0A1W2P7W0 230 aa10.3□□□□□ -0.76
Trim71-201ENSMUST00000111816 Celsr1O35161 3034 aa10.28□□□□□ -0.76
Trim71-201ENSMUST00000111816 Megf8P60882 2789 aa10.27□□□□□ -0.77
Trim71-201ENSMUST00000111816 Gm7138L7N2C3 230 aa10.24□□□□□ -0.77
Trim71-201ENSMUST00000111816 Gm3238W4VSP7 230 aa10.24□□□□□ -0.77
Trim71-201ENSMUST00000111816 AspmQ8CJ27 3122 aa10.21□□□□□ -0.77
Trim71-201ENSMUST00000111816 HttP42859 3119 aa10.18□□□□□ -0.78
Trim71-201ENSMUST00000111816 Gm20537G3UYK7 97 aa10.16□□□□□ -0.78
Trim71-201ENSMUST00000111816 Col12a1Q60847 3120 aa10.16□□□□□ -0.78
Trim71-201ENSMUST00000111816 Celsr3Q91ZI0 3301 aa10.13□□□□□ -0.79
Trim71-201ENSMUST00000111816 Gm7137J3QMW1 236 aa10.08□□□□□ -0.8
Trim71-201ENSMUST00000111816 Myo15aQ9QZZ4 3511 aa10.07□□□□□ -0.8
Trim71-201ENSMUST00000111816 VwfQ8CIZ8 2813 aa10.06□□□□□ -0.8
Trim71-201ENSMUST00000111816 Lrrc37aB1AWG4 3215 aa10.03□□□□□ -0.8
Trim71-201ENSMUST00000111816 Tnp2P11378 117 aa9.97□□□□□ -0.81
Trim71-201ENSMUST00000111816 Zfhx3Q61329 3726 aa9.96□□□□□ -0.81
Trim71-201ENSMUST00000111816 B930094E09RikQ8C4T2 136 aa9.95□□□□□ -0.82
Trim71-201ENSMUST00000111816 Adgrg4B7ZCC9 3073 aa9.93□□□□□ -0.82
Trim71-201ENSMUST00000111816 Tenm2Q9WTS5 2764 aa9.91□□□□□ -0.82
Trim71-201ENSMUST00000111816 Dchs2A0A0A6YW72 3346 aa9.9□□□□□ -0.82
Trim71-201ENSMUST00000111816 Brca2P97929 3329 aa9.84□□□□□ -0.83
Trim71-201ENSMUST00000111816 Akap9Q70FJ1 3797 aa9.77□□□□□ -0.85
Trim71-201ENSMUST00000111816 Cdh23Q99PF4 3354 aa9.77□□□□□ -0.85
Trim71-201ENSMUST00000111816 Gm17416Q30KP4 66 aa9.75□□□□□ -0.85
Trim71-201ENSMUST00000111816 Gm36176A0A1W2P8D5 158 aa9.74□□□□□ -0.85
Trim71-201ENSMUST00000111816 Tenm4Q3UHK6 2771 aa9.69□□□□□ -0.86
Trim71-201ENSMUST00000111816 Helz2E9QAM5 2947 aaKnown RBP9.69□□□□□ -0.86
Trim71-201ENSMUST00000111816 4933428G20RikQ9D3X4 101 aa9.67□□□□□ -0.86
Trim71-201ENSMUST00000111816 2310061N02RikQ9D6S9 174 aa9.66□□□□□ -0.86
Trim71-201ENSMUST00000111816 SpegQ62407 3262 aa9.65□□□□□ -0.87
Trim71-201ENSMUST00000111816 Col6a3E9PWQ3 3284 aa9.64□□□□□ -0.87
Trim71-201ENSMUST00000111816 A930033H14RikG5E8X6 103 aa9.61□□□□□ -0.87
Trim71-201ENSMUST00000111816 VcanQ62059 3357 aa9.58□□□□□ -0.88
Trim71-201ENSMUST00000111816 OtogO55225 2910 aa9.55□□□□□ -0.88
Trim71-201ENSMUST00000111816 Gm17402F6Z0L5 76 aa9.54□□□□□ -0.88
Trim71-201ENSMUST00000111816 Szt2A2A9C3 3431 aa9.54□□□□□ -0.88
Trim71-201ENSMUST00000111816 2310079G19RikQ9D6L6 185 aa9.46□□□□□ -0.9
Trim71-201ENSMUST00000111816 Gm9507D3Z5T3 223 aa9.46□□□□□ -0.9
Trim71-201ENSMUST00000111816 DmdP11531 3678 aa9.45□□□□□ -0.9
Trim71-201ENSMUST00000111816 Fbn1Q61554 2873 aaKnown RBP9.35□□□□□ -0.91
Trim71-201ENSMUST00000111816 Krtap10-4Q08EG8 221 aa9.34□□□□□ -0.91
Trim71-201ENSMUST00000111816 Vps13cQ8BX70 3748 aa9.29□□□□□ -0.92
Trim71-201ENSMUST00000111816 SpenQ62504 3644 aaKnown RBP9.26□□□□□ -0.93
Trim71-201ENSMUST00000111816 Cmya5Q70KF4 3739 aa9.25□□□□□ -0.93
Trim71-201ENSMUST00000111816 Krtap10-10A0A1W2P7T6 217 aa9.23□□□□□ -0.93
Trim71-201ENSMUST00000111816 Dchs1E9PVD3 3291 aa9.15□□□□□ -0.95
Trim71-201ENSMUST00000111816 Col7a1Q63870 2944 aa9.14□□□□□ -0.95
Trim71-201ENSMUST00000111816 Wdfy3Q6VNB8 3508 aa9.12□□□□□ -0.95
Trim71-201ENSMUST00000111816 2210017I01RikA0A0A6YVV1 95 aa9.07□□□□□ -0.96
Trim71-201ENSMUST00000111816 Gm2696A0A1W2P709 240 aa9.01□□□□□ -0.97
Trim71-201ENSMUST00000111816 Gm19668J3QMD1 248 aa9□□□□□ -0.97
Trim71-201ENSMUST00000111816 Smg1Q8BKX6 3658 aaKnown RBP9□□□□□ -0.97
Trim71-201ENSMUST00000111816 Muc5acE9QAQ8 3455 aa8.9□□□□□ -0.99
Trim71-201ENSMUST00000111816 Gm9918Q8BUR5 174 aa8.88□□□□□ -0.99
Trim71-201ENSMUST00000111816 Ank2Q8C8R3 3898 aa8.83□□□□□ -1
Trim71-201ENSMUST00000111816 BsnO88737 3942 aa8.76□□□□□ -1.01
Trim71-201ENSMUST00000111816 Csmd1Q923L3 3564 aa8.75□□□□□ -1.01
Trim71-201ENSMUST00000111816 RelnQ60841 3461 aa8.74□□□□□ -1.01
Trim71-201ENSMUST00000111816 Lama5Q61001 3718 aa8.68□□□□□ -1.02
Trim71-201ENSMUST00000111816 Zfhx4Q9JJN2 3550 aa8.68□□□□□ -1.02
Trim71-201ENSMUST00000111816 Muc6Q80T03 2850 aa8.65□□□□□ -1.02
Trim71-201ENSMUST00000111816 Gm884A2A9H6 3643 aa8.59□□□□□ -1.03
Trim71-201ENSMUST00000111816 Krtap13-1Q8K198 168 aa8.55□□□□□ -1.04
Trim71-201ENSMUST00000111816 Csmd2V9GX34 3611 aa8.5□□□□□ -1.05
Trim71-201ENSMUST00000111816 LystP97412 3788 aa8.34□□□□□ -1.07
Trim71-201ENSMUST00000111816 Muc4Q8JZM8 3443 aa8.26□□□□□ -1.09
Trim71-201ENSMUST00000111816 Gm9736A0A1W2P7N1 277 aa8.23□□□□□ -1.09
Trim71-201ENSMUST00000111816 Csmd3Q80T79 3707 aa8.2□□□□□ -1.1
Trim71-201ENSMUST00000111816 Gm6358A0A087WPH4 74 aa8.2□□□□□ -1.1
Trim71-201ENSMUST00000111816 Gm18596A0A1W2P860 280 aa8.15□□□□□ -1.1
Trim71-201ENSMUST00000111816 Krtap7-1Q9D3I6 87 aa8.12□□□□□ -1.11
Trim71-201ENSMUST00000111816 Gm11939A2A592 99 aa8.06□□□□□ -1.12
Trim71-201ENSMUST00000111816 Krtap3-1A2A591 98 aa8.06□□□□□ -1.12
Trim71-201ENSMUST00000111816 Xirp2Q4U4S6 3784 aa7.97□□□□□ -1.13
Trim71-201ENSMUST00000111816 Gm19402J3QJV4 266 aa7.93□□□□□ -1.14
Trim71-201ENSMUST00000111816 Gm10318A0A1W2P728 225 aa7.9□□□□□ -1.14
Trim71-201ENSMUST00000111816 Krtap3-2Q9D638 99 aa7.85□□□□□ -1.15
Trim71-201ENSMUST00000111816 Krtap3-3Q9D7P0 99 aa7.85□□□□□ -1.15
Trim71-201ENSMUST00000111816 Crct1Q6PAI5 102 aa7.81□□□□□ -1.16
Trim71-201ENSMUST00000111816 CubnQ9JLB4 3623 aa7.8□□□□□ -1.16
Trim71-201ENSMUST00000111816 Hspg2Q05793 3707 aaKnown RBP7.79□□□□□ -1.16
Trim71-201ENSMUST00000111816 Svep1A2AVA0 3567 aa7.78□□□□□ -1.16
Trim71-201ENSMUST00000111816 Krtap8-1O08633 61 aa7.76□□□□□ -1.17
Trim71-201ENSMUST00000111816 Krtap19-9aF8WH65 55 aa7.73□□□□□ -1.17
Trim71-201ENSMUST00000111816 Sprr2a3Q4KL71 83 aa7.7□□□□□ -1.18
Trim71-201ENSMUST00000111816 Sprr2a1Q9CQK8 83 aa7.7□□□□□ -1.18
Trim71-201ENSMUST00000111816 Krtap19-9bQ99NG9 58 aa7.69□□□□□ -1.18
Trim71-201ENSMUST00000111816 Krtap19-5O08632 62 aa7.68□□□□□ -1.18
Trim71-201ENSMUST00000111816 Sprr2kO70562 68 aa7.64□□□□□ -1.19
Trim71-201ENSMUST00000111816 Dnah3Q8BW94 4083 aa7.61□□□□□ -1.19
Trim71-201ENSMUST00000111816 Vps13bQ80TY5 3993 aa7.6□□□□□ -1.19
Trim71-201ENSMUST00000111816 Krtap12-1Q9Z287 130 aa7.54□□□□□ -1.2
Trim71-201ENSMUST00000111816 Krtap1-5A2A590 122 aa7.5□□□□□ -1.21
Trim71-201ENSMUST00000111816 Sprr2gO70558 76 aa7.44□□□□□ -1.22
Trim71-201ENSMUST00000111816 Dnah7bL7N1Y0 4068 aa7.38□□□□□ -1.23
Trim71-201ENSMUST00000111816 Dnah7cA0A087WR13 4024 aa7.29□□□□□ -1.24
Trim71-201ENSMUST00000111816 Dnah7aE9Q0T8 4024 aa7.25□□□□□ -1.25
Retrieved 100 of 22,080 RNA–protein pairs in 14.1 ms