RNA–Protein interactions for RNA: ENSMUST00000110586.9

Casc4-204, Transcript of Protein CASC4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Casc4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4-204ENSMUST00000110586 Col7a1Q63870 2944 aa9.06□□□□□ -0.96
Casc4-204ENSMUST00000110586 Gm10139O88245 57 aa9.02□□□□□ -0.97
Casc4-204ENSMUST00000110586 CubnQ9JLB4 3623 aa9.01□□□□□ -0.97
Casc4-204ENSMUST00000110586 Pla2g10Q9QXX3 151 aa9□□□□□ -0.97
Casc4-204ENSMUST00000110586 Tenm1Q9WTS4 2731 aa8.99□□□□□ -0.97
Casc4-204ENSMUST00000110586 Sprr1aQ62266 144 aa8.99□□□□□ -0.97
Casc4-204ENSMUST00000110586 Gm2310J3QNJ2 377 aa8.98□□□□□ -0.97
Casc4-204ENSMUST00000110586 LystP97412 3788 aa8.97□□□□□ -0.97
Casc4-204ENSMUST00000110586 Plac8Q9JI48 112 aa8.92□□□□□ -0.98
Casc4-204ENSMUST00000110586 Gm17606F6ZL36 78 aa8.9□□□□□ -0.98
Casc4-204ENSMUST00000110586 Gm11565A2A4M7 156 aa8.89□□□□□ -0.99
Casc4-204ENSMUST00000110586 Fbn1Q61554 2873 aaKnown RBP8.89□□□□□ -0.99
Casc4-204ENSMUST00000110586 VwfQ8CIZ8 2813 aa8.85□□□□□ -0.99
Casc4-204ENSMUST00000110586 Rnase13Q5GAM7 153 aa8.84□□□□□ -0.99
Casc4-204ENSMUST00000110586 Romo1P60603 79 aa8.78□□□□□ -1
Casc4-204ENSMUST00000110586 Gm16253D3Z167 63 aa8.73□□□□□ -1.01
Casc4-204ENSMUST00000110586 Defb11Q8R2I7 77 aa8.73□□□□□ -1.01
Casc4-204ENSMUST00000110586 RetnlbQ99P86 105 aa8.72□□□□□ -1.01
Casc4-204ENSMUST00000110586 Gm17349F7BGH6 99 aa8.66□□□□□ -1.02
Casc4-204ENSMUST00000110586 Gm9507D3Z5T3 223 aa8.65□□□□□ -1.02
Casc4-204ENSMUST00000110586 Gm4491E0CX42 125 aa8.62□□□□□ -1.03
Casc4-204ENSMUST00000110586 Krtap14O08640 167 aa8.62□□□□□ -1.03
Casc4-204ENSMUST00000110586 Krtap13O88375 197 aa8.6□□□□□ -1.03
Casc4-204ENSMUST00000110586 AW011738F6S7Q2 159 aa8.59□□□□□ -1.03
Casc4-204ENSMUST00000110586 NbdyA0A0N4SUI7 68 aa8.57□□□□□ -1.04
Casc4-204ENSMUST00000110586 Ndufaf8A2AMZ4 74 aa8.57□□□□□ -1.04
Casc4-204ENSMUST00000110586 Krtap10-4Q08EG8 221 aa8.57□□□□□ -1.04
Casc4-204ENSMUST00000110586 Muc6Q80T03 2850 aa8.56□□□□□ -1.04
Casc4-204ENSMUST00000110586 Gm10065F6TJM2 114 aa8.55□□□□□ -1.04
Casc4-204ENSMUST00000110586 Prm2P07978 107 aa8.55□□□□□ -1.04
Casc4-204ENSMUST00000110586 Gm9955Q8CEJ8 102 aa8.54□□□□□ -1.04
Casc4-204ENSMUST00000110586 Ank2Q8C8R3 3898 aa8.52□□□□□ -1.04
Casc4-204ENSMUST00000110586 Tenm2Q9WTS5 2764 aa8.5□□□□□ -1.05
Casc4-204ENSMUST00000110586 Gm10382Q3V0T5 144 aa8.5□□□□□ -1.05
Casc4-204ENSMUST00000110586 2310050C09RikG5E8Z3 280 aa8.45□□□□□ -1.06
Casc4-204ENSMUST00000110586 Rpl37Q9D823 97 aa8.43□□□□□ -1.06
Casc4-204ENSMUST00000110586 Gm20537G3UYK7 97 aa8.39□□□□□ -1.07
Casc4-204ENSMUST00000110586 Krtap10-10A0A1W2P7T6 217 aa8.39□□□□□ -1.07
Casc4-204ENSMUST00000110586 D6Ertd527eA0A0N4SWI3 464 aa8.37□□□□□ -1.07
Casc4-204ENSMUST00000110586 Xirp2Q4U4S6 3784 aa8.35□□□□□ -1.07
Casc4-204ENSMUST00000110586 2310061N02RikQ9D6S9 174 aa8.32□□□□□ -1.08
Casc4-204ENSMUST00000110586 Krtap29-1A2A5X4 342 aa8.27□□□□□ -1.09
Casc4-204ENSMUST00000110586 Cox6b2Q80ZN9 88 aa8.25□□□□□ -1.09
Casc4-204ENSMUST00000110586 Hspg2Q05793 3707 aaKnown RBP8.25□□□□□ -1.09
Casc4-204ENSMUST00000110586 Megf8P60882 2789 aa8.25□□□□□ -1.09
Casc4-204ENSMUST00000110586 Gm2696A0A1W2P709 240 aa8.19□□□□□ -1.1
Casc4-204ENSMUST00000110586 2310079G19RikQ9D6L6 185 aa8.19□□□□□ -1.1
Casc4-204ENSMUST00000110586 Gm9112A2AI92 75 aa8.17□□□□□ -1.1
Casc4-204ENSMUST00000110586 BsnO88737 3942 aa8.14□□□□□ -1.11
Casc4-204ENSMUST00000110586 Tnp2P11378 117 aa8.05□□□□□ -1.12
Casc4-204ENSMUST00000110586 Gm19426M0QWC7 77 aa8.03□□□□□ -1.12
Casc4-204ENSMUST00000110586 Csmd3Q80T79 3707 aa8.03□□□□□ -1.12
Casc4-204ENSMUST00000110586 Fam229aB2KGE5 128 aa8.01□□□□□ -1.13
Casc4-204ENSMUST00000110586 Krtap15-1Q9QZU5 150 aa8.01□□□□□ -1.13
Casc4-204ENSMUST00000110586 Gm21887J3QQ04 176 aa7.93□□□□□ -1.14
Casc4-204ENSMUST00000110586 A930033H14RikG5E8X6 103 aa7.9□□□□□ -1.15
Casc4-204ENSMUST00000110586 Gm5965D3Z724 196 aa7.86□□□□□ -1.15
Casc4-204ENSMUST00000110586 Spink7Q6IE32 76 aa7.84□□□□□ -1.15
Casc4-204ENSMUST00000110586 Gm5767A0A0J9YTU8 78 aa7.82□□□□□ -1.16
Casc4-204ENSMUST00000110586 Dnah10D3YYQ8 4591 aa7.77□□□□□ -1.16
Casc4-204ENSMUST00000110586 Dnah14A0A140LIJ4 4489 aa7.75□□□□□ -1.17
Casc4-204ENSMUST00000110586 BC029722A0A0N4SW31 51 aa7.7□□□□□ -1.18
Casc4-204ENSMUST00000110586 2310057N15RikQ9D6T8 200 aa7.68□□□□□ -1.18
Casc4-204ENSMUST00000110586 Camk2n1Q6QWF9 78 aa7.64□□□□□ -1.19
Casc4-204ENSMUST00000110586 Krtap3-2Q9D638 99 aa7.62□□□□□ -1.19
Casc4-204ENSMUST00000110586 Krtap3-3Q9D7P0 99 aa7.62□□□□□ -1.19
Casc4-204ENSMUST00000110586 Gm9918Q8BUR5 174 aa7.61□□□□□ -1.19
Casc4-204ENSMUST00000110586 B930094E09RikQ8C4T2 136 aa7.56□□□□□ -1.2
Casc4-204ENSMUST00000110586 Sec61bQ9CQS8 96 aaKnown RBP7.53□□□□□ -1.2
Casc4-204ENSMUST00000110586 Rps29P62274 56 aa7.52□□□□□ -1.21
Casc4-204ENSMUST00000110586 Gm40193A0A1B0GT39 78 aa7.47□□□□□ -1.21
Casc4-204ENSMUST00000110586 Dnah7bL7N1Y0 4068 aa7.47□□□□□ -1.21
Casc4-204ENSMUST00000110586 Gm9736A0A1W2P7N1 277 aa7.43□□□□□ -1.22
Casc4-204ENSMUST00000110586 Gm11939A2A592 99 aa7.4□□□□□ -1.22
Casc4-204ENSMUST00000110586 Dnah11E9Q7N9 4488 aa7.33□□□□□ -1.24
Casc4-204ENSMUST00000110586 Huwe1Q7TMY8 4377 aaKnown RBP7.32□□□□□ -1.24
Casc4-204ENSMUST00000110586 Gm19668J3QMD1 248 aa7.2□□□□□ -1.26
Casc4-204ENSMUST00000110586 Krtap7-1Q9D3I6 87 aa7.2□□□□□ -1.26
Casc4-204ENSMUST00000110586 Dnah5Q8VHE6 4621 aa7.18□□□□□ -1.26
Casc4-204ENSMUST00000110586 Kmt2aP55200 3966 aa7.15□□□□□ -1.26
Casc4-204ENSMUST00000110586 PlecQ9QXS1 4691 aaKnown RBP7.14□□□□□ -1.27
Casc4-204ENSMUST00000110586 Fras1Q80T14 4010 aa7.13□□□□□ -1.27
Casc4-204ENSMUST00000110586 Krtap3-1A2A591 98 aa7.11□□□□□ -1.27
Casc4-204ENSMUST00000110586 PrkdcP97313 4128 aa7.09□□□□□ -1.27
Casc4-204ENSMUST00000110586 TnxbO35452 4006 aa7.09□□□□□ -1.27
Casc4-204ENSMUST00000110586 Ryr1E9PZQ0 5035 aa7.09□□□□□ -1.27
Casc4-204ENSMUST00000110586 Dnah9B1AR51 4484 aa7.09□□□□□ -1.27
Casc4-204ENSMUST00000110586 Dnah3Q8BW94 4083 aa7.09□□□□□ -1.27
Casc4-204ENSMUST00000110586 Gm10318A0A1W2P728 225 aa7.08□□□□□ -1.28
Casc4-204ENSMUST00000110586 2210017I01RikA0A0A6YVV1 95 aa7.08□□□□□ -1.28
Casc4-204ENSMUST00000110586 Tnp1P10856 55 aa7.08□□□□□ -1.28
Casc4-204ENSMUST00000110586 Gm17416Q30KP4 66 aa7.07□□□□□ -1.28
Casc4-204ENSMUST00000110586 Stard9Q80TF6 4561 aa7.05□□□□□ -1.28
Casc4-204ENSMUST00000110586 Ryr3A2AGL3 4863 aa7.04□□□□□ -1.28
Casc4-204ENSMUST00000110586 Dnah17Q69Z23 4481 aa7□□□□□ -1.29
Casc4-204ENSMUST00000110586 Krtap19-5O08632 62 aa6.99□□□□□ -1.29
Casc4-204ENSMUST00000110586 Dnah6E9Q0B6 4144 aa6.99□□□□□ -1.29
Casc4-204ENSMUST00000110586 Krtap13-1Q8K198 168 aa6.98□□□□□ -1.29
Casc4-204ENSMUST00000110586 Hectd4E9Q2E4 4418 aa6.94□□□□□ -1.3
Casc4-204ENSMUST00000110586 Dnah1E9Q8T7 4250 aa6.92□□□□□ -1.3
Retrieved 100 of 22,080 RNA–protein pairs in 46.3 ms