RNA–Protein interactions for RNA: ENSMUST00000108362.7

Sptbn4-202, Transcript of Spectrin beta chain, mousemouse

TSL 1 (best) BASIC

Gene Sptbn4, Length 4,861 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4-202ENSMUST00000108362 Csmd1Q923L3 3564 aa9.55□□□□□ -0.88
Sptbn4-202ENSMUST00000108362 Camk2n1Q6QWF9 78 aa9.55□□□□□ -0.88
Sptbn4-202ENSMUST00000108362 Gm17349F7BGH6 99 aa9.53□□□□□ -0.88
Sptbn4-202ENSMUST00000108362 Gm10382Q3V0T5 144 aa9.53□□□□□ -0.88
Sptbn4-202ENSMUST00000108362 TgO08710 2766 aa9.5□□□□□ -0.89
Sptbn4-202ENSMUST00000108362 Krtap13O88375 197 aa9.49□□□□□ -0.89
Sptbn4-202ENSMUST00000108362 Itpr2Q9Z329 2701 aa9.48□□□□□ -0.89
Sptbn4-202ENSMUST00000108362 Srrm2Q8BTI8 2703 aaKnown RBP9.47□□□□□ -0.89
Sptbn4-202ENSMUST00000108362 ApcQ61315 2845 aa9.45□□□□□ -0.9
Sptbn4-202ENSMUST00000108362 Celsr2Q9R0M0 2920 aa9.44□□□□□ -0.9
Sptbn4-202ENSMUST00000108362 Chd9Q8BYH8 2885 aa9.43□□□□□ -0.9
Sptbn4-202ENSMUST00000108362 Zfhx3Q61329 3726 aa9.4□□□□□ -0.9
Sptbn4-202ENSMUST00000108362 2310050C09RikG5E8Z3 280 aa9.39□□□□□ -0.91
Sptbn4-202ENSMUST00000108362 Krtap29-1A2A5X4 342 aa9.39□□□□□ -0.91
Sptbn4-202ENSMUST00000108362 Gm2310J3QNJ2 377 aa9.38□□□□□ -0.91
Sptbn4-202ENSMUST00000108362 Fam229aB2KGE5 128 aa9.37□□□□□ -0.91
Sptbn4-202ENSMUST00000108362 Gm5767A0A0J9YTU8 78 aa9.36□□□□□ -0.91
Sptbn4-202ENSMUST00000108362 BC029722A0A0N4SW31 51 aa9.34□□□□□ -0.91
Sptbn4-202ENSMUST00000108362 Nf1Q04690 2841 aa9.34□□□□□ -0.91
Sptbn4-202ENSMUST00000108362 Tenm3Q9WTS6 2715 aa9.27□□□□□ -0.93
Sptbn4-202ENSMUST00000108362 Krtap14O08640 167 aa9.25□□□□□ -0.93
Sptbn4-202ENSMUST00000108362 Sec61bQ9CQS8 96 aaKnown RBP9.24□□□□□ -0.93
Sptbn4-202ENSMUST00000108362 Gm19426M0QWC7 77 aa9.24□□□□□ -0.93
Sptbn4-202ENSMUST00000108362 Svep1A2AVA0 3567 aa9.23□□□□□ -0.93
Sptbn4-202ENSMUST00000108362 Gm9507D3Z5T3 223 aa9.22□□□□□ -0.93
Sptbn4-202ENSMUST00000108362 LrbaQ9ESE1 2856 aa9.22□□□□□ -0.93
Sptbn4-202ENSMUST00000108362 Cox6b2Q80ZN9 88 aa9.2□□□□□ -0.94
Sptbn4-202ENSMUST00000108362 Krtap10-4Q08EG8 221 aa9.19□□□□□ -0.94
Sptbn4-202ENSMUST00000108362 Pdzd2E9Q1M1 2796 aa9.16□□□□□ -0.94
Sptbn4-202ENSMUST00000108362 2310061N02RikQ9D6S9 174 aa9.16□□□□□ -0.94
Sptbn4-202ENSMUST00000108362 Ndufaf8A2AMZ4 74 aa9.12□□□□□ -0.95
Sptbn4-202ENSMUST00000108362 Tenm4Q3UHK6 2771 aa9.11□□□□□ -0.95
Sptbn4-202ENSMUST00000108362 Cmya5Q70KF4 3739 aa9.09□□□□□ -0.95
Sptbn4-202ENSMUST00000108362 D6Ertd527eA0A0N4SWI3 464 aa9.07□□□□□ -0.96
Sptbn4-202ENSMUST00000108362 OtogO55225 2910 aa9.06□□□□□ -0.96
Sptbn4-202ENSMUST00000108362 Helz2E9QAM5 2947 aaKnown RBP9.06□□□□□ -0.96
Sptbn4-202ENSMUST00000108362 Krtap10-10A0A1W2P7T6 217 aa9.05□□□□□ -0.96
Sptbn4-202ENSMUST00000108362 Tnp2P11378 117 aa9□□□□□ -0.97
Sptbn4-202ENSMUST00000108362 Muc4Q8JZM8 3443 aa8.98□□□□□ -0.97
Sptbn4-202ENSMUST00000108362 Tenm1Q9WTS4 2731 aa8.93□□□□□ -0.98
Sptbn4-202ENSMUST00000108362 Rps29P62274 56 aa8.92□□□□□ -0.98
Sptbn4-202ENSMUST00000108362 Gm9112A2AI92 75 aa8.85□□□□□ -0.99
Sptbn4-202ENSMUST00000108362 Gm2696A0A1W2P709 240 aa8.76□□□□□ -1.01
Sptbn4-202ENSMUST00000108362 Gm21887J3QQ04 176 aa8.75□□□□□ -1.01
Sptbn4-202ENSMUST00000108362 Gm20537G3UYK7 97 aa8.7□□□□□ -1.02
Sptbn4-202ENSMUST00000108362 Megf8P60882 2789 aa8.65□□□□□ -1.03
Sptbn4-202ENSMUST00000108362 Gm5965D3Z724 196 aa8.64□□□□□ -1.03
Sptbn4-202ENSMUST00000108362 Csmd2V9GX34 3611 aa8.6□□□□□ -1.03
Sptbn4-202ENSMUST00000108362 Col7a1Q63870 2944 aa8.59□□□□□ -1.03
Sptbn4-202ENSMUST00000108362 Gm40193A0A1B0GT39 78 aa8.57□□□□□ -1.04
Sptbn4-202ENSMUST00000108362 Tnp1P10856 55 aa8.56□□□□□ -1.04
Sptbn4-202ENSMUST00000108362 Fbn1Q61554 2873 aaKnown RBP8.56□□□□□ -1.04
Sptbn4-202ENSMUST00000108362 Ank2Q8C8R3 3898 aa8.54□□□□□ -1.04
Sptbn4-202ENSMUST00000108362 LystP97412 3788 aa8.5□□□□□ -1.05
Sptbn4-202ENSMUST00000108362 2310057N15RikQ9D6T8 200 aa8.49□□□□□ -1.05
Sptbn4-202ENSMUST00000108362 Tenm2Q9WTS5 2764 aa8.49□□□□□ -1.05
Sptbn4-202ENSMUST00000108362 2310079G19RikQ9D6L6 185 aa8.42□□□□□ -1.06
Sptbn4-202ENSMUST00000108362 B930094E09RikQ8C4T2 136 aa8.4□□□□□ -1.06
Sptbn4-202ENSMUST00000108362 VwfQ8CIZ8 2813 aa8.4□□□□□ -1.06
Sptbn4-202ENSMUST00000108362 A930033H14RikG5E8X6 103 aa8.38□□□□□ -1.07
Sptbn4-202ENSMUST00000108362 Xirp2Q4U4S6 3784 aa8.34□□□□□ -1.07
Sptbn4-202ENSMUST00000108362 CubnQ9JLB4 3623 aa8.32□□□□□ -1.08
Sptbn4-202ENSMUST00000108362 BsnO88737 3942 aa8.29□□□□□ -1.08
Sptbn4-202ENSMUST00000108362 Prm2P07978 107 aa8.27□□□□□ -1.09
Sptbn4-202ENSMUST00000108362 Gm17416Q30KP4 66 aa8.1□□□□□ -1.11
Sptbn4-202ENSMUST00000108362 Gm9736A0A1W2P7N1 277 aa8.01□□□□□ -1.13
Sptbn4-202ENSMUST00000108362 2210017I01RikA0A0A6YVV1 95 aa8.01□□□□□ -1.13
Sptbn4-202ENSMUST00000108362 Gm9918Q8BUR5 174 aa7.96□□□□□ -1.13
Sptbn4-202ENSMUST00000108362 Muc6Q80T03 2850 aa7.96□□□□□ -1.14
Sptbn4-202ENSMUST00000108362 Hspg2Q05793 3707 aaKnown RBP7.93□□□□□ -1.14
Sptbn4-202ENSMUST00000108362 Gm17402F6Z0L5 76 aa7.87□□□□□ -1.15
Sptbn4-202ENSMUST00000108362 Dnah14A0A140LIJ4 4489 aa7.83□□□□□ -1.16
Sptbn4-202ENSMUST00000108362 Gm11939A2A592 99 aa7.77□□□□□ -1.17
Sptbn4-202ENSMUST00000108362 Dnah10D3YYQ8 4591 aa7.71□□□□□ -1.18
Sptbn4-202ENSMUST00000108362 Gm10318A0A1W2P728 225 aa7.7□□□□□ -1.18
Sptbn4-202ENSMUST00000108362 Gm19668J3QMD1 248 aa7.62□□□□□ -1.19
Sptbn4-202ENSMUST00000108362 Krtap19-5O08632 62 aa7.61□□□□□ -1.19
Sptbn4-202ENSMUST00000108362 Krtap13-1Q8K198 168 aa7.58□□□□□ -1.2
Sptbn4-202ENSMUST00000108362 Krtap3-2Q9D638 99 aa7.58□□□□□ -1.2
Sptbn4-202ENSMUST00000108362 Krtap3-3Q9D7P0 99 aa7.58□□□□□ -1.2
Sptbn4-202ENSMUST00000108362 Dnah7bL7N1Y0 4068 aa7.55□□□□□ -1.2
Sptbn4-202ENSMUST00000108362 Huwe1Q7TMY8 4377 aaKnown RBP7.54□□□□□ -1.2
Sptbn4-202ENSMUST00000108362 4933428G20RikQ9D3X4 101 aa7.51□□□□□ -1.21
Sptbn4-202ENSMUST00000108362 Dnah17Q69Z23 4481 aa7.51□□□□□ -1.21
Sptbn4-202ENSMUST00000108362 Crct1Q6PAI5 102 aa7.48□□□□□ -1.21
Sptbn4-202ENSMUST00000108362 Krtap3-1A2A591 98 aa7.47□□□□□ -1.21
Sptbn4-202ENSMUST00000108362 Kmt2aP55200 3966 aa7.45□□□□□ -1.22
Sptbn4-202ENSMUST00000108362 Dnah3Q8BW94 4083 aa7.42□□□□□ -1.22
Sptbn4-202ENSMUST00000108362 Dnah6E9Q0B6 4144 aa7.42□□□□□ -1.22
Sptbn4-202ENSMUST00000108362 Csmd3Q80T79 3707 aa7.42□□□□□ -1.22
Sptbn4-202ENSMUST00000108362 Dnah11E9Q7N9 4488 aa7.34□□□□□ -1.23
Sptbn4-202ENSMUST00000108362 TnxbO35452 4006 aa7.33□□□□□ -1.24
Sptbn4-202ENSMUST00000108362 Dnah5Q8VHE6 4621 aa7.32□□□□□ -1.24
Sptbn4-202ENSMUST00000108362 PlecQ9QXS1 4691 aaKnown RBP7.32□□□□□ -1.24
Sptbn4-202ENSMUST00000108362 Dnah9B1AR51 4484 aa7.26□□□□□ -1.25
Sptbn4-202ENSMUST00000108362 Vps13dB1ART2 4390 aa7.23□□□□□ -1.25
Sptbn4-202ENSMUST00000108362 PrkdcP97313 4128 aa7.22□□□□□ -1.25
Sptbn4-202ENSMUST00000108362 Stard9Q80TF6 4561 aa7.16□□□□□ -1.26
Sptbn4-202ENSMUST00000108362 Dnah1E9Q8T7 4250 aa7.16□□□□□ -1.26
Sptbn4-202ENSMUST00000108362 Dync2h1Q45VK7 4306 aa7.07□□□□□ -1.28
Retrieved 100 of 22,080 RNA–protein pairs in 14.3 ms