RNA–Protein interactions for RNA: ENSMUST00000106612.7

Sox6-202, Transcript of Transcription factor SOX-6, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Sox6, Length 8,193 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6-202ENSMUST00000106612 Fam229aB2KGE5 128 aa4.51□□□□□ -1.69
Sox6-202ENSMUST00000106612 Krtap14O08640 167 aa4.5□□□□□ -1.69
Sox6-202ENSMUST00000106612 Tnp2P11378 117 aa4.5□□□□□ -1.69
Sox6-202ENSMUST00000106612 Pdzd2E9Q1M1 2796 aa4.5□□□□□ -1.69
Sox6-202ENSMUST00000106612 Trank1Q8BV79 2999 aa4.49□□□□□ -1.69
Sox6-202ENSMUST00000106612 Gm19426M0QWC7 77 aa4.48□□□□□ -1.69
Sox6-202ENSMUST00000106612 Sec61bQ9CQS8 96 aaKnown RBP4.48□□□□□ -1.69
Sox6-202ENSMUST00000106612 Krtap13O88375 197 aa4.47□□□□□ -1.69
Sox6-202ENSMUST00000106612 D6Ertd527eA0A0N4SWI3 464 aa4.46□□□□□ -1.7
Sox6-202ENSMUST00000106612 Col6a3E9PWQ3 3284 aa4.44□□□□□ -1.7
Sox6-202ENSMUST00000106612 Zfhx3Q61329 3726 aa4.43□□□□□ -1.7
Sox6-202ENSMUST00000106612 LrbaQ9ESE1 2856 aa4.42□□□□□ -1.7
Sox6-202ENSMUST00000106612 Tenm3Q9WTS6 2715 aa4.41□□□□□ -1.7
Sox6-202ENSMUST00000106612 Vps13cQ8BX70 3748 aa4.4□□□□□ -1.7
Sox6-202ENSMUST00000106612 Dchs2A0A0A6YW72 3346 aa4.4□□□□□ -1.7
Sox6-202ENSMUST00000106612 Helz2E9QAM5 2947 aaKnown RBP4.37□□□□□ -1.71
Sox6-202ENSMUST00000106612 VcanQ62059 3357 aa4.36□□□□□ -1.71
Sox6-202ENSMUST00000106612 Ndufaf8A2AMZ4 74 aa4.34□□□□□ -1.71
Sox6-202ENSMUST00000106612 Akap9Q70FJ1 3797 aa4.34□□□□□ -1.72
Sox6-202ENSMUST00000106612 Gm9507D3Z5T3 223 aa4.34□□□□□ -1.72
Sox6-202ENSMUST00000106612 Wdfy3Q6VNB8 3508 aa4.33□□□□□ -1.72
Sox6-202ENSMUST00000106612 Dchs1E9PVD3 3291 aa4.33□□□□□ -1.72
Sox6-202ENSMUST00000106612 SpegQ62407 3262 aa4.32□□□□□ -1.72
Sox6-202ENSMUST00000106612 Gm40193A0A1B0GT39 78 aa4.32□□□□□ -1.72
Sox6-202ENSMUST00000106612 Myo15aQ9QZZ4 3511 aa4.3□□□□□ -1.72
Sox6-202ENSMUST00000106612 Tenm4Q3UHK6 2771 aa4.3□□□□□ -1.72
Sox6-202ENSMUST00000106612 Tenm1Q9WTS4 2731 aa4.3□□□□□ -1.72
Sox6-202ENSMUST00000106612 RelnQ60841 3461 aa4.3□□□□□ -1.72
Sox6-202ENSMUST00000106612 DmdP11531 3678 aa4.29□□□□□ -1.72
Sox6-202ENSMUST00000106612 Gm20537G3UYK7 97 aa4.28□□□□□ -1.72
Sox6-202ENSMUST00000106612 Krtap10-4Q08EG8 221 aa4.26□□□□□ -1.73
Sox6-202ENSMUST00000106612 A930033H14RikG5E8X6 103 aa4.24□□□□□ -1.73
Sox6-202ENSMUST00000106612 2310079G19RikQ9D6L6 185 aa4.22□□□□□ -1.73
Sox6-202ENSMUST00000106612 Gm9112A2AI92 75 aa4.22□□□□□ -1.73
Sox6-202ENSMUST00000106612 Gm21887J3QQ04 176 aa4.21□□□□□ -1.73
Sox6-202ENSMUST00000106612 Krtap10-10A0A1W2P7T6 217 aa4.19□□□□□ -1.74
Sox6-202ENSMUST00000106612 Csmd1Q923L3 3564 aa4.18□□□□□ -1.74
Sox6-202ENSMUST00000106612 Muc5acE9QAQ8 3455 aa4.15□□□□□ -1.75
Sox6-202ENSMUST00000106612 Tnp1P10856 55 aa4.15□□□□□ -1.75
Sox6-202ENSMUST00000106612 Smg1Q8BKX6 3658 aaKnown RBP4.15□□□□□ -1.75
Sox6-202ENSMUST00000106612 OtogO55225 2910 aa4.14□□□□□ -1.75
Sox6-202ENSMUST00000106612 B930094E09RikQ8C4T2 136 aa4.13□□□□□ -1.75
Sox6-202ENSMUST00000106612 SpenQ62504 3644 aaKnown RBP4.11□□□□□ -1.75
Sox6-202ENSMUST00000106612 Gm2696A0A1W2P709 240 aa4.1□□□□□ -1.75
Sox6-202ENSMUST00000106612 Lama5Q61001 3718 aa4.1□□□□□ -1.75
Sox6-202ENSMUST00000106612 Gm5965D3Z724 196 aa4.1□□□□□ -1.75
Sox6-202ENSMUST00000106612 Gm17416Q30KP4 66 aa4.07□□□□□ -1.76
Sox6-202ENSMUST00000106612 VwfQ8CIZ8 2813 aa4.06□□□□□ -1.76
Sox6-202ENSMUST00000106612 Megf8P60882 2789 aa4.05□□□□□ -1.76
Sox6-202ENSMUST00000106612 Zfhx4Q9JJN2 3550 aa4.04□□□□□ -1.76
Sox6-202ENSMUST00000106612 Gm884A2A9H6 3643 aa4.04□□□□□ -1.76
Sox6-202ENSMUST00000106612 Cmya5Q70KF4 3739 aa4.02□□□□□ -1.77
Sox6-202ENSMUST00000106612 Ank2Q8C8R3 3898 aa4.02□□□□□ -1.77
Sox6-202ENSMUST00000106612 Gm17402F6Z0L5 76 aa4.01□□□□□ -1.77
Sox6-202ENSMUST00000106612 Fbn1Q61554 2873 aaKnown RBP4.01□□□□□ -1.77
Sox6-202ENSMUST00000106612 Tenm2Q9WTS5 2764 aa4□□□□□ -1.77
Sox6-202ENSMUST00000106612 2210017I01RikA0A0A6YVV1 95 aa3.98□□□□□ -1.77
Sox6-202ENSMUST00000106612 2310057N15RikQ9D6T8 200 aa3.95□□□□□ -1.78
Sox6-202ENSMUST00000106612 Prm2P07978 107 aa3.95□□□□□ -1.78
Sox6-202ENSMUST00000106612 Gm11939A2A592 99 aa3.86□□□□□ -1.79
Sox6-202ENSMUST00000106612 Svep1A2AVA0 3567 aa3.85□□□□□ -1.79
Sox6-202ENSMUST00000106612 Col7a1Q63870 2944 aa3.85□□□□□ -1.79
Sox6-202ENSMUST00000106612 Krtap3-2Q9D638 99 aa3.83□□□□□ -1.8
Sox6-202ENSMUST00000106612 Krtap3-3Q9D7P0 99 aa3.83□□□□□ -1.8
Sox6-202ENSMUST00000106612 Muc4Q8JZM8 3443 aa3.77□□□□□ -1.81
Sox6-202ENSMUST00000106612 Csmd2V9GX34 3611 aa3.77□□□□□ -1.81
Sox6-202ENSMUST00000106612 Gm9736A0A1W2P7N1 277 aa3.77□□□□□ -1.81
Sox6-202ENSMUST00000106612 Muc6Q80T03 2850 aa3.77□□□□□ -1.81
Sox6-202ENSMUST00000106612 Gm19668J3QMD1 248 aa3.72□□□□□ -1.81
Sox6-202ENSMUST00000106612 Krtap3-1A2A591 98 aa3.72□□□□□ -1.81
Sox6-202ENSMUST00000106612 LystP97412 3788 aa3.7□□□□□ -1.82
Sox6-202ENSMUST00000106612 Krtap13-1Q8K198 168 aa3.7□□□□□ -1.82
Sox6-202ENSMUST00000106612 Gm9918Q8BUR5 174 aa3.67□□□□□ -1.82
Sox6-202ENSMUST00000106612 4933428G20RikQ9D3X4 101 aa3.66□□□□□ -1.82
Sox6-202ENSMUST00000106612 Krtap19-5O08632 62 aa3.65□□□□□ -1.83
Sox6-202ENSMUST00000106612 Xirp2Q4U4S6 3784 aa3.59□□□□□ -1.83
Sox6-202ENSMUST00000106612 CubnQ9JLB4 3623 aa3.55□□□□□ -1.84
Sox6-202ENSMUST00000106612 BsnO88737 3942 aa3.53□□□□□ -1.84
Sox6-202ENSMUST00000106612 Csmd3Q80T79 3707 aa3.52□□□□□ -1.85
Sox6-202ENSMUST00000106612 Krtap7-1Q9D3I6 87 aa3.52□□□□□ -1.85
Sox6-202ENSMUST00000106612 Hspg2Q05793 3707 aaKnown RBP3.49□□□□□ -1.85
Sox6-202ENSMUST00000106612 Gm10318A0A1W2P728 225 aa3.48□□□□□ -1.85
Sox6-202ENSMUST00000106612 Sprr2a3Q4KL71 83 aa3.48□□□□□ -1.85
Sox6-202ENSMUST00000106612 Sprr2a1Q9CQK8 83 aa3.48□□□□□ -1.85
Sox6-202ENSMUST00000106612 Krtap1-5A2A590 122 aa3.46□□□□□ -1.86
Sox6-202ENSMUST00000106612 Huwe1Q7TMY8 4377 aaKnown RBP3.45□□□□□ -1.86
Sox6-202ENSMUST00000106612 Crct1Q6PAI5 102 aa3.44□□□□□ -1.86
Sox6-202ENSMUST00000106612 Dnah14A0A140LIJ4 4489 aa3.43□□□□□ -1.86
Sox6-202ENSMUST00000106612 Dnah3Q8BW94 4083 aa3.41□□□□□ -1.86
Sox6-202ENSMUST00000106612 Dnah7bL7N1Y0 4068 aa3.41□□□□□ -1.86
Sox6-202ENSMUST00000106612 Dnah10D3YYQ8 4591 aa3.37□□□□□ -1.87
Sox6-202ENSMUST00000106612 Dnah5Q8VHE6 4621 aa3.35□□□□□ -1.87
Sox6-202ENSMUST00000106612 Vps13dB1ART2 4390 aa3.35□□□□□ -1.87
Sox6-202ENSMUST00000106612 Krtap19-9aF8WH65 55 aa3.34□□□□□ -1.88
Sox6-202ENSMUST00000106612 Dnah17Q69Z23 4481 aa3.33□□□□□ -1.88
Sox6-202ENSMUST00000106612 Krtap1-4Q3V2D6 188 aa3.3□□□□□ -1.88
Sox6-202ENSMUST00000106612 TnxbO35452 4006 aa3.29□□□□□ -1.88
Sox6-202ENSMUST00000106612 Krtap19-9bQ99NG9 58 aa3.27□□□□□ -1.89
Sox6-202ENSMUST00000106612 Kmt2aP55200 3966 aa3.27□□□□□ -1.89
Sox6-202ENSMUST00000106612 Gm19402J3QJV4 266 aa3.24□□□□□ -1.89
Retrieved 100 of 22,080 RNA–protein pairs in 26.9 ms