RNA–Protein interactions for RNA: ENSMUST00000101616.8

Smarca1-203, Transcript of Probable global transcription activator SNF2L1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Smarca1, Length 3,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1-203ENSMUST00000101616 Gm10139O88245 57 aa5.11□□□□□ -1.59
Smarca1-203ENSMUST00000101616 Mp68P56379 58 aa5.1□□□□□ -1.59
Smarca1-203ENSMUST00000101616 Fbn1Q61554 2873 aaKnown RBP5.08□□□□□ -1.6
Smarca1-203ENSMUST00000101616 Gm36176A0A1W2P8D5 158 aa5.07□□□□□ -1.6
Smarca1-203ENSMUST00000101616 Cypt14J3QPF7 87 aa5.06□□□□□ -1.6
Smarca1-203ENSMUST00000101616 Rnase13Q5GAM7 153 aa5.05□□□□□ -1.6
Smarca1-203ENSMUST00000101616 Gm11565A2A4M7 156 aa5.05□□□□□ -1.6
Smarca1-203ENSMUST00000101616 FcgbpE9Q0B5 2583 aa5.04□□□□□ -1.6
Smarca1-203ENSMUST00000101616 VwfQ8CIZ8 2813 aa5.04□□□□□ -1.6
Smarca1-203ENSMUST00000101616 Xirp2Q4U4S6 3784 aa5.03□□□□□ -1.6
Smarca1-203ENSMUST00000101616 BsnO88737 3942 aa5.01□□□□□ -1.61
Smarca1-203ENSMUST00000101616 Dnah7bL7N1Y0 4068 aa5□□□□□ -1.61
Smarca1-203ENSMUST00000101616 NbdyA0A0N4SUI7 68 aa4.99□□□□□ -1.61
Smarca1-203ENSMUST00000101616 Krtap13O88375 197 aa4.98□□□□□ -1.61
Smarca1-203ENSMUST00000101616 Tenm1Q9WTS4 2731 aa4.98□□□□□ -1.61
Smarca1-203ENSMUST00000101616 Gm16253D3Z167 63 aa4.98□□□□□ -1.61
Smarca1-203ENSMUST00000101616 AW011738F6S7Q2 159 aa4.98□□□□□ -1.61
Smarca1-203ENSMUST00000101616 Gm10065F6TJM2 114 aa4.97□□□□□ -1.61
Smarca1-203ENSMUST00000101616 Gm2310J3QNJ2 377 aa4.97□□□□□ -1.61
Smarca1-203ENSMUST00000101616 Gm4491E0CX42 125 aa4.95□□□□□ -1.62
Smarca1-203ENSMUST00000101616 Kmt2aP55200 3966 aa4.95□□□□□ -1.62
Smarca1-203ENSMUST00000101616 OxtP35454 125 aa4.94□□□□□ -1.62
Smarca1-203ENSMUST00000101616 Pla2g10Q9QXX3 151 aa4.91□□□□□ -1.62
Smarca1-203ENSMUST00000101616 Defb11Q8R2I7 77 aa4.9□□□□□ -1.62
Smarca1-203ENSMUST00000101616 Tenm4Q3UHK6 2771 aa4.9□□□□□ -1.63
Smarca1-203ENSMUST00000101616 Gm9507D3Z5T3 223 aa4.87□□□□□ -1.63
Smarca1-203ENSMUST00000101616 Gm17349F7BGH6 99 aa4.87□□□□□ -1.63
Smarca1-203ENSMUST00000101616 Hspg2Q05793 3707 aaKnown RBP4.87□□□□□ -1.63
Smarca1-203ENSMUST00000101616 Krtap10-4Q08EG8 221 aa4.86□□□□□ -1.63
Smarca1-203ENSMUST00000101616 Gm9955Q8CEJ8 102 aa4.86□□□□□ -1.63
Smarca1-203ENSMUST00000101616 2310050C09RikG5E8Z3 280 aa4.86□□□□□ -1.63
Smarca1-203ENSMUST00000101616 Dnah3Q8BW94 4083 aa4.85□□□□□ -1.63
Smarca1-203ENSMUST00000101616 Dync2h1Q45VK7 4306 aa4.85□□□□□ -1.63
Smarca1-203ENSMUST00000101616 Dnah1E9Q8T7 4250 aa4.84□□□□□ -1.63
Smarca1-203ENSMUST00000101616 Gm20538F6Z9R1 75 aa4.84□□□□□ -1.64
Smarca1-203ENSMUST00000101616 Csmd3Q80T79 3707 aa4.84□□□□□ -1.64
Smarca1-203ENSMUST00000101616 2310061N02RikQ9D6S9 174 aa4.83□□□□□ -1.64
Smarca1-203ENSMUST00000101616 Col7a1Q63870 2944 aa4.81□□□□□ -1.64
Smarca1-203ENSMUST00000101616 Krtap14O08640 167 aa4.8□□□□□ -1.64
Smarca1-203ENSMUST00000101616 Krtap29-1A2A5X4 342 aa4.79□□□□□ -1.64
Smarca1-203ENSMUST00000101616 Gm10382Q3V0T5 144 aa4.76□□□□□ -1.65
Smarca1-203ENSMUST00000101616 Rpl37Q9D823 97 aa4.76□□□□□ -1.65
Smarca1-203ENSMUST00000101616 Krtap10-10A0A1W2P7T6 217 aa4.76□□□□□ -1.65
Smarca1-203ENSMUST00000101616 Romo1P60603 79 aa4.75□□□□□ -1.65
Smarca1-203ENSMUST00000101616 Megf8P60882 2789 aa4.75□□□□□ -1.65
Smarca1-203ENSMUST00000101616 Krtap15-1Q9QZU5 150 aa4.75□□□□□ -1.65
Smarca1-203ENSMUST00000101616 Dnah6E9Q0B6 4144 aa4.74□□□□□ -1.65
Smarca1-203ENSMUST00000101616 Krtap4-1Q3UUY3 169 aa4.7□□□□□ -1.66
Smarca1-203ENSMUST00000101616 D6Ertd527eA0A0N4SWI3 464 aa4.7□□□□□ -1.66
Smarca1-203ENSMUST00000101616 Muc6Q80T03 2850 aa4.7□□□□□ -1.66
Smarca1-203ENSMUST00000101616 Tenm2Q9WTS5 2764 aa4.7□□□□□ -1.66
Smarca1-203ENSMUST00000101616 Cox6b2Q80ZN9 88 aa4.66□□□□□ -1.66
Smarca1-203ENSMUST00000101616 Spink7Q6IE32 76 aa4.66□□□□□ -1.66
Smarca1-203ENSMUST00000101616 Ndufaf8A2AMZ4 74 aa4.65□□□□□ -1.67
Smarca1-203ENSMUST00000101616 Tnp2P11378 117 aa4.64□□□□□ -1.67
Smarca1-203ENSMUST00000101616 Fras1Q80T14 4010 aa4.62□□□□□ -1.67
Smarca1-203ENSMUST00000101616 Gm20537G3UYK7 97 aa4.61□□□□□ -1.67
Smarca1-203ENSMUST00000101616 Gm2696A0A1W2P709 240 aa4.61□□□□□ -1.67
Smarca1-203ENSMUST00000101616 Gm5767A0A0J9YTU8 78 aa4.59□□□□□ -1.68
Smarca1-203ENSMUST00000101616 TnxbO35452 4006 aa4.57□□□□□ -1.68
Smarca1-203ENSMUST00000101616 Gm19426M0QWC7 77 aa4.56□□□□□ -1.68
Smarca1-203ENSMUST00000101616 Dnah17Q69Z23 4481 aa4.56□□□□□ -1.68
Smarca1-203ENSMUST00000101616 2310079G19RikQ9D6L6 185 aa4.53□□□□□ -1.68
Smarca1-203ENSMUST00000101616 PrkdcP97313 4128 aa4.51□□□□□ -1.69
Smarca1-203ENSMUST00000101616 Fam229aB2KGE5 128 aa4.5□□□□□ -1.69
Smarca1-203ENSMUST00000101616 BC029722A0A0N4SW31 51 aa4.5□□□□□ -1.69
Smarca1-203ENSMUST00000101616 Camk2n1Q6QWF9 78 aa4.47□□□□□ -1.69
Smarca1-203ENSMUST00000101616 Huwe1Q7TMY8 4377 aaKnown RBP4.47□□□□□ -1.69
Smarca1-203ENSMUST00000101616 Dnah7aE9Q0T8 4024 aa4.45□□□□□ -1.7
Smarca1-203ENSMUST00000101616 Dnah10D3YYQ8 4591 aa4.45□□□□□ -1.7
Smarca1-203ENSMUST00000101616 Prm2P07978 107 aa4.45□□□□□ -1.7
Smarca1-203ENSMUST00000101616 Dnah7cA0A087WR13 4024 aa4.43□□□□□ -1.7
Smarca1-203ENSMUST00000101616 Gm9112A2AI92 75 aa4.42□□□□□ -1.7
Smarca1-203ENSMUST00000101616 Gm5965D3Z724 196 aa4.41□□□□□ -1.7
Smarca1-203ENSMUST00000101616 Vps13dB1ART2 4390 aa4.41□□□□□ -1.7
Smarca1-203ENSMUST00000101616 A930033H14RikG5E8X6 103 aa4.4□□□□□ -1.7
Smarca1-203ENSMUST00000101616 Gm21887J3QQ04 176 aa4.38□□□□□ -1.71
Smarca1-203ENSMUST00000101616 Rps29P62274 56 aa4.38□□□□□ -1.71
Smarca1-203ENSMUST00000101616 Gm11555B1AQ89 175 aa4.36□□□□□ -1.71
Smarca1-203ENSMUST00000101616 Dnah14A0A140LIJ4 4489 aa4.35□□□□□ -1.71
Smarca1-203ENSMUST00000101616 Pkhd1l1Q80ZA4 4249 aa4.35□□□□□ -1.71
Smarca1-203ENSMUST00000101616 Gm11563B1AQ90 168 aa4.34□□□□□ -1.72
Smarca1-203ENSMUST00000101616 Krtap4-7Q9D732 168 aa4.34□□□□□ -1.72
Smarca1-203ENSMUST00000101616 Dnah11E9Q7N9 4488 aa4.29□□□□□ -1.72
Smarca1-203ENSMUST00000101616 Sec61bQ9CQS8 96 aaKnown RBP4.28□□□□□ -1.72
Smarca1-203ENSMUST00000101616 2310057N15RikQ9D6T8 200 aa4.27□□□□□ -1.73
Smarca1-203ENSMUST00000101616 B930094E09RikQ8C4T2 136 aa4.26□□□□□ -1.73
Smarca1-203ENSMUST00000101616 Pkhd1E9PZ36 4059 aa4.26□□□□□ -1.73
Smarca1-203ENSMUST00000101616 Gm9736A0A1W2P7N1 277 aa4.25□□□□□ -1.73
Smarca1-203ENSMUST00000101616 Dnah9B1AR51 4484 aa4.24□□□□□ -1.73
Smarca1-203ENSMUST00000101616 Dnah5Q8VHE6 4621 aa4.23□□□□□ -1.73
Smarca1-203ENSMUST00000101616 Hectd4E9Q2E4 4418 aa4.23□□□□□ -1.73
Smarca1-203ENSMUST00000101616 Dnah2P0C6F1 4456 aa4.22□□□□□ -1.73
Smarca1-203ENSMUST00000101616 Krtap3-2Q9D638 99 aa4.22□□□□□ -1.73
Smarca1-203ENSMUST00000101616 Krtap3-3Q9D7P0 99 aa4.22□□□□□ -1.73
Smarca1-203ENSMUST00000101616 ApobE9Q414 4505 aa4.22□□□□□ -1.73
Smarca1-203ENSMUST00000101616 PlecQ9QXS1 4691 aaKnown RBP4.21□□□□□ -1.74
Smarca1-203ENSMUST00000101616 Gm11939A2A592 99 aa4.2□□□□□ -1.74
Smarca1-203ENSMUST00000101616 Gm9918Q8BUR5 174 aa4.16□□□□□ -1.74
Smarca1-203ENSMUST00000101616 Gm40193A0A1B0GT39 78 aa4.15□□□□□ -1.74
Retrieved 100 of 22,080 RNA–protein pairs in 180 ms