RNA–Protein interactions for RNA: ENSMUST00000089332.4

Col8a1-201, Transcript of Collagen alpha-1(VIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col8a1, Length 5,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1-201ENSMUST00000089332 Rpl37Q9D823 97 aa7.07□□□□□ -1.28
Col8a1-201ENSMUST00000089332 Srrm2Q8BTI8 2703 aaKnown RBP7.06□□□□□ -1.28
Col8a1-201ENSMUST00000089332 ApcQ61315 2845 aa7.05□□□□□ -1.28
Col8a1-201ENSMUST00000089332 Krtap14O08640 167 aa7.04□□□□□ -1.28
Col8a1-201ENSMUST00000089332 Krtap10-4Q08EG8 221 aa7.04□□□□□ -1.28
Col8a1-201ENSMUST00000089332 Rps29P62274 56 aa7.03□□□□□ -1.28
Col8a1-201ENSMUST00000089332 Pdzd2E9Q1M1 2796 aa7.02□□□□□ -1.29
Col8a1-201ENSMUST00000089332 Tenm3Q9WTS6 2715 aa7□□□□□ -1.29
Col8a1-201ENSMUST00000089332 SmcpP15265 143 aa7□□□□□ -1.29
Col8a1-201ENSMUST00000089332 LrbaQ9ESE1 2856 aa6.99□□□□□ -1.29
Col8a1-201ENSMUST00000089332 RelnQ60841 3461 aa6.98□□□□□ -1.29
Col8a1-201ENSMUST00000089332 SpegQ62407 3262 aa6.98□□□□□ -1.29
Col8a1-201ENSMUST00000089332 4933415A04RikQ9D443 101 aa6.97□□□□□ -1.29
Col8a1-201ENSMUST00000089332 Romo1P60603 79 aa6.97□□□□□ -1.29
Col8a1-201ENSMUST00000089332 Tnp2P11378 117 aa6.94□□□□□ -1.3
Col8a1-201ENSMUST00000089332 1700042G07RikB1AUF7 90 aa6.94□□□□□ -1.3
Col8a1-201ENSMUST00000089332 Myo15aQ9QZZ4 3511 aa6.94□□□□□ -1.3
Col8a1-201ENSMUST00000089332 Gm2310J3QNJ2 377 aa6.93□□□□□ -1.3
Col8a1-201ENSMUST00000089332 Krtap10-10A0A1W2P7T6 217 aa6.92□□□□□ -1.3
Col8a1-201ENSMUST00000089332 Wdfy3Q6VNB8 3508 aa6.92□□□□□ -1.3
Col8a1-201ENSMUST00000089332 Gm10382Q3V0T5 144 aa6.88□□□□□ -1.31
Col8a1-201ENSMUST00000089332 Helz2E9QAM5 2947 aaKnown RBP6.87□□□□□ -1.31
Col8a1-201ENSMUST00000089332 Cox6b2Q80ZN9 88 aa6.82□□□□□ -1.32
Col8a1-201ENSMUST00000089332 Zfhx3Q61329 3726 aa6.78□□□□□ -1.32
Col8a1-201ENSMUST00000089332 Muc5acE9QAQ8 3455 aa6.77□□□□□ -1.33
Col8a1-201ENSMUST00000089332 Gm2696A0A1W2P709 240 aa6.76□□□□□ -1.33
Col8a1-201ENSMUST00000089332 Akap9Q70FJ1 3797 aa6.76□□□□□ -1.33
Col8a1-201ENSMUST00000089332 DmdP11531 3678 aa6.71□□□□□ -1.33
Col8a1-201ENSMUST00000089332 Vps13cQ8BX70 3748 aa6.7□□□□□ -1.34
Col8a1-201ENSMUST00000089332 Tenm1Q9WTS4 2731 aa6.7□□□□□ -1.34
Col8a1-201ENSMUST00000089332 D6Ertd527eA0A0N4SWI3 464 aa6.69□□□□□ -1.34
Col8a1-201ENSMUST00000089332 OtogO55225 2910 aa6.62□□□□□ -1.35
Col8a1-201ENSMUST00000089332 Gm5965D3Z724 196 aa6.59□□□□□ -1.36
Col8a1-201ENSMUST00000089332 Gm21887J3QQ04 176 aa6.56□□□□□ -1.36
Col8a1-201ENSMUST00000089332 Tenm2Q9WTS5 2764 aa6.54□□□□□ -1.36
Col8a1-201ENSMUST00000089332 Csmd1Q923L3 3564 aa6.51□□□□□ -1.37
Col8a1-201ENSMUST00000089332 Smg1Q8BKX6 3658 aaKnown RBP6.5□□□□□ -1.37
Col8a1-201ENSMUST00000089332 2310057N15RikQ9D6T8 200 aa6.48□□□□□ -1.37
Col8a1-201ENSMUST00000089332 SpenQ62504 3644 aaKnown RBP6.45□□□□□ -1.38
Col8a1-201ENSMUST00000089332 Lama5Q61001 3718 aa6.45□□□□□ -1.38
Col8a1-201ENSMUST00000089332 Zfhx4Q9JJN2 3550 aa6.43□□□□□ -1.38
Col8a1-201ENSMUST00000089332 Ndufaf8A2AMZ4 74 aa6.42□□□□□ -1.38
Col8a1-201ENSMUST00000089332 A930033H14RikG5E8X6 103 aa6.4□□□□□ -1.38
Col8a1-201ENSMUST00000089332 VwfQ8CIZ8 2813 aa6.4□□□□□ -1.39
Col8a1-201ENSMUST00000089332 Tnp1P10856 55 aa6.39□□□□□ -1.39
Col8a1-201ENSMUST00000089332 Gm40193A0A1B0GT39 78 aa6.35□□□□□ -1.39
Col8a1-201ENSMUST00000089332 Fbn1Q61554 2873 aaKnown RBP6.32□□□□□ -1.4
Col8a1-201ENSMUST00000089332 Col7a1Q63870 2944 aa6.29□□□□□ -1.4
Col8a1-201ENSMUST00000089332 Gm9112A2AI92 75 aa6.27□□□□□ -1.41
Col8a1-201ENSMUST00000089332 Gm20537G3UYK7 97 aa6.26□□□□□ -1.41
Col8a1-201ENSMUST00000089332 Gm17416Q30KP4 66 aa6.24□□□□□ -1.41
Col8a1-201ENSMUST00000089332 Megf8P60882 2789 aa6.23□□□□□ -1.41
Col8a1-201ENSMUST00000089332 B930094E09RikQ8C4T2 136 aa6.22□□□□□ -1.41
Col8a1-201ENSMUST00000089332 2310079G19RikQ9D6L6 185 aa6.18□□□□□ -1.42
Col8a1-201ENSMUST00000089332 Gm884A2A9H6 3643 aa6.17□□□□□ -1.42
Col8a1-201ENSMUST00000089332 Svep1A2AVA0 3567 aa6.16□□□□□ -1.42
Col8a1-201ENSMUST00000089332 Gm9736A0A1W2P7N1 277 aa6.15□□□□□ -1.42
Col8a1-201ENSMUST00000089332 Muc4Q8JZM8 3443 aa6.12□□□□□ -1.43
Col8a1-201ENSMUST00000089332 2210017I01RikA0A0A6YVV1 95 aa6.11□□□□□ -1.43
Col8a1-201ENSMUST00000089332 Cmya5Q70KF4 3739 aa6.08□□□□□ -1.44
Col8a1-201ENSMUST00000089332 Muc6Q80T03 2850 aa6.07□□□□□ -1.44
Col8a1-201ENSMUST00000089332 Gm17402F6Z0L5 76 aa6.02□□□□□ -1.45
Col8a1-201ENSMUST00000089332 Gm9918Q8BUR5 174 aa6.01□□□□□ -1.45
Col8a1-201ENSMUST00000089332 Prm2P07978 107 aa6□□□□□ -1.45
Col8a1-201ENSMUST00000089332 Csmd2V9GX34 3611 aa5.94□□□□□ -1.46
Col8a1-201ENSMUST00000089332 Ank2Q8C8R3 3898 aa5.93□□□□□ -1.46
Col8a1-201ENSMUST00000089332 Gm11939A2A592 99 aa5.92□□□□□ -1.46
Col8a1-201ENSMUST00000089332 Krtap19-5O08632 62 aa5.87□□□□□ -1.47
Col8a1-201ENSMUST00000089332 Gm10318A0A1W2P728 225 aa5.79□□□□□ -1.48
Col8a1-201ENSMUST00000089332 Gm19668J3QMD1 248 aa5.76□□□□□ -1.49
Col8a1-201ENSMUST00000089332 LystP97412 3788 aa5.75□□□□□ -1.49
Col8a1-201ENSMUST00000089332 Krtap13-1Q8K198 168 aa5.75□□□□□ -1.49
Col8a1-201ENSMUST00000089332 Krtap3-2Q9D638 99 aa5.73□□□□□ -1.49
Col8a1-201ENSMUST00000089332 Krtap3-3Q9D7P0 99 aa5.73□□□□□ -1.49
Col8a1-201ENSMUST00000089332 Crct1Q6PAI5 102 aa5.69□□□□□ -1.5
Col8a1-201ENSMUST00000089332 CubnQ9JLB4 3623 aa5.67□□□□□ -1.5
Col8a1-201ENSMUST00000089332 Dnah14A0A140LIJ4 4489 aa5.66□□□□□ -1.5
Col8a1-201ENSMUST00000089332 4933428G20RikQ9D3X4 101 aa5.61□□□□□ -1.51
Col8a1-201ENSMUST00000089332 Krtap3-1A2A591 98 aa5.59□□□□□ -1.51
Col8a1-201ENSMUST00000089332 Huwe1Q7TMY8 4377 aaKnown RBP5.5□□□□□ -1.53
Col8a1-201ENSMUST00000089332 Dnah10D3YYQ8 4591 aa5.5□□□□□ -1.53
Col8a1-201ENSMUST00000089332 Dnah5Q8VHE6 4621 aa5.45□□□□□ -1.54
Col8a1-201ENSMUST00000089332 Csmd3Q80T79 3707 aa5.39□□□□□ -1.55
Col8a1-201ENSMUST00000089332 Stard9Q80TF6 4561 aa5.35□□□□□ -1.55
Col8a1-201ENSMUST00000089332 Hspg2Q05793 3707 aaKnown RBP5.34□□□□□ -1.55
Col8a1-201ENSMUST00000089332 PlecQ9QXS1 4691 aaKnown RBP5.34□□□□□ -1.55
Col8a1-201ENSMUST00000089332 Xirp2Q4U4S6 3784 aa5.33□□□□□ -1.56
Col8a1-201ENSMUST00000089332 Vps13dB1ART2 4390 aa5.32□□□□□ -1.56
Col8a1-201ENSMUST00000089332 Krtap1-5A2A590 122 aa5.29□□□□□ -1.56
Col8a1-201ENSMUST00000089332 BsnO88737 3942 aa5.29□□□□□ -1.56
Col8a1-201ENSMUST00000089332 Dnah17Q69Z23 4481 aa5.26□□□□□ -1.57
Col8a1-201ENSMUST00000089332 Krtap19-9aF8WH65 55 aa5.23□□□□□ -1.57
Col8a1-201ENSMUST00000089332 Gm6358A0A087WPH4 74 aa5.21□□□□□ -1.57
Col8a1-201ENSMUST00000089332 Sprr2a3Q4KL71 83 aa5.21□□□□□ -1.58
Col8a1-201ENSMUST00000089332 Sprr2a1Q9CQK8 83 aa5.21□□□□□ -1.58
Col8a1-201ENSMUST00000089332 Krtap8-1O08633 61 aa5.19□□□□□ -1.58
Col8a1-201ENSMUST00000089332 Gm18596A0A1W2P860 280 aa5.19□□□□□ -1.58
Col8a1-201ENSMUST00000089332 Krtap1-4Q3V2D6 188 aa5.15□□□□□ -1.59
Col8a1-201ENSMUST00000089332 Dnah11E9Q7N9 4488 aa5.15□□□□□ -1.59
Col8a1-201ENSMUST00000089332 LorP18165 486 aa5.12□□□□□ -1.59
Retrieved 100 of 22,080 RNA–protein pairs in 75.1 ms