RNA–Protein interactions for RNA: ENSMUST00000078886.9

Spen-201, Transcript of Msx2-interacting protein, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Spen, Length 12,082 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Spen-201ENSMUST00000078886 Lama3Q61789 3330 aa4.76□□□□□ -1.65
Spen-201ENSMUST00000078886 Krtap13O88375 197 aa4.74□□□□□ -1.65
Spen-201ENSMUST00000078886 Prm2P07978 107 aa4.72□□□□□ -1.65
Spen-201ENSMUST00000078886 Krtap29-1A2A5X4 342 aa4.72□□□□□ -1.65
Spen-201ENSMUST00000078886 Gm2310J3QNJ2 377 aa4.71□□□□□ -1.66
Spen-201ENSMUST00000078886 Akap9Q70FJ1 3797 aa4.7□□□□□ -1.66
Spen-201ENSMUST00000078886 Helz2E9QAM5 2947 aaKnown RBP4.7□□□□□ -1.66
Spen-201ENSMUST00000078886 Gm40193A0A1B0GT39 78 aa4.68□□□□□ -1.66
Spen-201ENSMUST00000078886 Tnp1P10856 55 aa4.66□□□□□ -1.66
Spen-201ENSMUST00000078886 Tenm4Q3UHK6 2771 aa4.65□□□□□ -1.66
Spen-201ENSMUST00000078886 Adgrg4B7ZCC9 3073 aa4.65□□□□□ -1.67
Spen-201ENSMUST00000078886 VwfQ8CIZ8 2813 aa4.65□□□□□ -1.67
Spen-201ENSMUST00000078886 Unc80Q8BLN6 3261 aa4.62□□□□□ -1.67
Spen-201ENSMUST00000078886 Gm36176A0A1W2P8D5 158 aa4.6□□□□□ -1.67
Spen-201ENSMUST00000078886 Gm5965D3Z724 196 aa4.6□□□□□ -1.67
Spen-201ENSMUST00000078886 D6Ertd527eA0A0N4SWI3 464 aa4.59□□□□□ -1.67
Spen-201ENSMUST00000078886 Celsr3Q91ZI0 3301 aa4.57□□□□□ -1.68
Spen-201ENSMUST00000078886 Tenm2Q9WTS5 2764 aa4.56□□□□□ -1.68
Spen-201ENSMUST00000078886 Megf8P60882 2789 aa4.56□□□□□ -1.68
Spen-201ENSMUST00000078886 2310057N15RikQ9D6T8 200 aa4.55□□□□□ -1.68
Spen-201ENSMUST00000078886 Rps29P62274 56 aa4.54□□□□□ -1.68
Spen-201ENSMUST00000078886 Fbn1Q61554 2873 aaKnown RBP4.54□□□□□ -1.68
Spen-201ENSMUST00000078886 OtogO55225 2910 aa4.53□□□□□ -1.68
Spen-201ENSMUST00000078886 Vps13cQ8BX70 3748 aa4.5□□□□□ -1.69
Spen-201ENSMUST00000078886 Lrrc37aB1AWG4 3215 aa4.49□□□□□ -1.69
Spen-201ENSMUST00000078886 Tnp2P11378 117 aa4.48□□□□□ -1.69
Spen-201ENSMUST00000078886 Gm20537G3UYK7 97 aa4.45□□□□□ -1.7
Spen-201ENSMUST00000078886 2310061N02RikQ9D6S9 174 aa4.45□□□□□ -1.7
Spen-201ENSMUST00000078886 Gm9507D3Z5T3 223 aa4.45□□□□□ -1.7
Spen-201ENSMUST00000078886 DmdP11531 3678 aa4.43□□□□□ -1.7
Spen-201ENSMUST00000078886 Col7a1Q63870 2944 aa4.41□□□□□ -1.7
Spen-201ENSMUST00000078886 Krtap10-4Q08EG8 221 aa4.4□□□□□ -1.7
Spen-201ENSMUST00000078886 Zfhx3Q61329 3726 aa4.39□□□□□ -1.71
Spen-201ENSMUST00000078886 Dchs2A0A0A6YW72 3346 aa4.38□□□□□ -1.71
Spen-201ENSMUST00000078886 B930094E09RikQ8C4T2 136 aa4.36□□□□□ -1.71
Spen-201ENSMUST00000078886 Brca2P97929 3329 aa4.36□□□□□ -1.71
Spen-201ENSMUST00000078886 Krtap10-10A0A1W2P7T6 217 aa4.36□□□□□ -1.71
Spen-201ENSMUST00000078886 Cmya5Q70KF4 3739 aa4.35□□□□□ -1.71
Spen-201ENSMUST00000078886 Myo15aQ9QZZ4 3511 aa4.32□□□□□ -1.72
Spen-201ENSMUST00000078886 BsnO88737 3942 aa4.28□□□□□ -1.72
Spen-201ENSMUST00000078886 Cdh23Q99PF4 3354 aa4.27□□□□□ -1.73
Spen-201ENSMUST00000078886 Muc6Q80T03 2850 aa4.27□□□□□ -1.73
Spen-201ENSMUST00000078886 SpegQ62407 3262 aa4.26□□□□□ -1.73
Spen-201ENSMUST00000078886 Col6a3E9PWQ3 3284 aa4.25□□□□□ -1.73
Spen-201ENSMUST00000078886 4933428G20RikQ9D3X4 101 aa4.23□□□□□ -1.73
Spen-201ENSMUST00000078886 Gm2696A0A1W2P709 240 aa4.22□□□□□ -1.73
Spen-201ENSMUST00000078886 VcanQ62059 3357 aa4.22□□□□□ -1.73
Spen-201ENSMUST00000078886 A930033H14RikG5E8X6 103 aa4.21□□□□□ -1.74
Spen-201ENSMUST00000078886 2310079G19RikQ9D6L6 185 aa4.18□□□□□ -1.74
Spen-201ENSMUST00000078886 Szt2A2A9C3 3431 aa4.16□□□□□ -1.74
Spen-201ENSMUST00000078886 Dnah3Q8BW94 4083 aa4.16□□□□□ -1.74
Spen-201ENSMUST00000078886 Gm9918Q8BUR5 174 aa4.13□□□□□ -1.75
Spen-201ENSMUST00000078886 Lama5Q61001 3718 aa4.12□□□□□ -1.75
Spen-201ENSMUST00000078886 Dchs1E9PVD3 3291 aa4.09□□□□□ -1.76
Spen-201ENSMUST00000078886 Dnah7bL7N1Y0 4068 aa4.08□□□□□ -1.76
Spen-201ENSMUST00000078886 Gm17416Q30KP4 66 aa4.08□□□□□ -1.76
Spen-201ENSMUST00000078886 Gm17402F6Z0L5 76 aa4.08□□□□□ -1.76
Spen-201ENSMUST00000078886 SpenQ62504 3644 aaKnown RBP4.02□□□□□ -1.77
Spen-201ENSMUST00000078886 2210017I01RikA0A0A6YVV1 95 aa4.02□□□□□ -1.77
Spen-201ENSMUST00000078886 Smg1Q8BKX6 3658 aaKnown RBP4.02□□□□□ -1.77
Spen-201ENSMUST00000078886 Xirp2Q4U4S6 3784 aa4.01□□□□□ -1.77
Spen-201ENSMUST00000078886 Dnah7cA0A087WR13 4024 aa4□□□□□ -1.77
Spen-201ENSMUST00000078886 Dnah7aE9Q0T8 4024 aa3.97□□□□□ -1.77
Spen-201ENSMUST00000078886 LystP97412 3788 aa3.96□□□□□ -1.78
Spen-201ENSMUST00000078886 Wdfy3Q6VNB8 3508 aa3.95□□□□□ -1.78
Spen-201ENSMUST00000078886 Csmd1Q923L3 3564 aa3.93□□□□□ -1.78
Spen-201ENSMUST00000078886 Gm19668J3QMD1 248 aa3.92□□□□□ -1.78
Spen-201ENSMUST00000078886 RelnQ60841 3461 aa3.92□□□□□ -1.78
Spen-201ENSMUST00000078886 Muc5acE9QAQ8 3455 aa3.91□□□□□ -1.78
Spen-201ENSMUST00000078886 Gm884A2A9H6 3643 aa3.9□□□□□ -1.79
Spen-201ENSMUST00000078886 Gm9736A0A1W2P7N1 277 aa3.89□□□□□ -1.79
Spen-201ENSMUST00000078886 Dnah6E9Q0B6 4144 aa3.88□□□□□ -1.79
Spen-201ENSMUST00000078886 Muc4Q8JZM8 3443 aa3.87□□□□□ -1.79
Spen-201ENSMUST00000078886 Zfhx4Q9JJN2 3550 aa3.86□□□□□ -1.79
Spen-201ENSMUST00000078886 Dnah10D3YYQ8 4591 aa3.83□□□□□ -1.8
Spen-201ENSMUST00000078886 Gm11939A2A592 99 aa3.81□□□□□ -1.8
Spen-201ENSMUST00000078886 Krtap13-1Q8K198 168 aa3.8□□□□□ -1.8
Spen-201ENSMUST00000078886 Huwe1Q7TMY8 4377 aaKnown RBP3.76□□□□□ -1.81
Spen-201ENSMUST00000078886 Kmt2aP55200 3966 aa3.75□□□□□ -1.81
Spen-201ENSMUST00000078886 Gm10318A0A1W2P728 225 aa3.75□□□□□ -1.81
Spen-201ENSMUST00000078886 Vps13bQ80TY5 3993 aa3.74□□□□□ -1.81
Spen-201ENSMUST00000078886 Vps13dB1ART2 4390 aa3.74□□□□□ -1.81
Spen-201ENSMUST00000078886 Csmd2V9GX34 3611 aa3.74□□□□□ -1.81
Spen-201ENSMUST00000078886 Hspg2Q05793 3707 aaKnown RBP3.73□□□□□ -1.81
Spen-201ENSMUST00000078886 Krtap3-1A2A591 98 aa3.72□□□□□ -1.81
Spen-201ENSMUST00000078886 Gm6358A0A087WPH4 74 aa3.71□□□□□ -1.82
Spen-201ENSMUST00000078886 Krtap3-2Q9D638 99 aa3.7□□□□□ -1.82
Spen-201ENSMUST00000078886 Krtap3-3Q9D7P0 99 aa3.7□□□□□ -1.82
Spen-201ENSMUST00000078886 Dnah14A0A140LIJ4 4489 aa3.68□□□□□ -1.82
Spen-201ENSMUST00000078886 Fras1Q80T14 4010 aa3.66□□□□□ -1.82
Spen-201ENSMUST00000078886 TnxbO35452 4006 aa3.65□□□□□ -1.82
Spen-201ENSMUST00000078886 Csmd3Q80T79 3707 aa3.64□□□□□ -1.83
Spen-201ENSMUST00000078886 PrkdcP97313 4128 aa3.62□□□□□ -1.83
Spen-201ENSMUST00000078886 Dnah17Q69Z23 4481 aa3.62□□□□□ -1.83
Spen-201ENSMUST00000078886 Krtap19-5O08632 62 aa3.6□□□□□ -1.83
Spen-201ENSMUST00000078886 Crct1Q6PAI5 102 aa3.6□□□□□ -1.83
Spen-201ENSMUST00000078886 Gm18596A0A1W2P860 280 aa3.59□□□□□ -1.83
Spen-201ENSMUST00000078886 PlecQ9QXS1 4691 aaKnown RBP3.58□□□□□ -1.84
Spen-201ENSMUST00000078886 Dnah1E9Q8T7 4250 aa3.57□□□□□ -1.84
Spen-201ENSMUST00000078886 Krtap7-1Q9D3I6 87 aa3.55□□□□□ -1.84
Retrieved 100 of 22,080 RNA–protein pairs in 47.2 ms