RNA–Protein interactions for RNA: ENSMUST00000070797.6

Pcdha1-201, Transcript of Protocadherin alpha 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Pcdha1, Length 5,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-201ENSMUST00000070797 Brca2P97929 3329 aa7.88□□□□□ -1.15
Pcdha1-201ENSMUST00000070797 Krtap10-4Q08EG8 221 aa7.87□□□□□ -1.15
Pcdha1-201ENSMUST00000070797 Prm2P07978 107 aa7.86□□□□□ -1.15
Pcdha1-201ENSMUST00000070797 Adgrg4B7ZCC9 3073 aa7.85□□□□□ -1.15
Pcdha1-201ENSMUST00000070797 Tex15F8VPN2 2785 aa7.85□□□□□ -1.15
Pcdha1-201ENSMUST00000070797 Utp20Q5XG71 2788 aaKnown RBP7.82□□□□□ -1.16
Pcdha1-201ENSMUST00000070797 Gm5965D3Z724 196 aa7.81□□□□□ -1.16
Pcdha1-201ENSMUST00000070797 Dmxl2Q8BPN8 3032 aa7.81□□□□□ -1.16
Pcdha1-201ENSMUST00000070797 Itpr2Q9Z329 2701 aa7.78□□□□□ -1.16
Pcdha1-201ENSMUST00000070797 Tnp1P10856 55 aa7.77□□□□□ -1.16
Pcdha1-201ENSMUST00000070797 Krtap10-10A0A1W2P7T6 217 aa7.77□□□□□ -1.17
Pcdha1-201ENSMUST00000070797 TgO08710 2766 aa7.76□□□□□ -1.17
Pcdha1-201ENSMUST00000070797 Vps13cQ8BX70 3748 aa7.76□□□□□ -1.17
Pcdha1-201ENSMUST00000070797 NbeaQ9EPN1 2936 aa7.75□□□□□ -1.17
Pcdha1-201ENSMUST00000070797 B930094E09RikQ8C4T2 136 aa7.73□□□□□ -1.17
Pcdha1-201ENSMUST00000070797 Trank1Q8BV79 2999 aa7.73□□□□□ -1.17
Pcdha1-201ENSMUST00000070797 DmdP11531 3678 aa7.72□□□□□ -1.17
Pcdha1-201ENSMUST00000070797 FcgbpE9Q0B5 2583 aa7.7□□□□□ -1.18
Pcdha1-201ENSMUST00000070797 Zfhx3Q61329 3726 aa7.68□□□□□ -1.18
Pcdha1-201ENSMUST00000070797 Col6a3E9PWQ3 3284 aa7.67□□□□□ -1.18
Pcdha1-201ENSMUST00000070797 Igfn1Q3KNY0 2849 aa7.67□□□□□ -1.18
Pcdha1-201ENSMUST00000070797 Dchs2A0A0A6YW72 3346 aa7.64□□□□□ -1.19
Pcdha1-201ENSMUST00000070797 Tenm4Q3UHK6 2771 aa7.64□□□□□ -1.19
Pcdha1-201ENSMUST00000070797 2310057N15RikQ9D6T8 200 aa7.62□□□□□ -1.19
Pcdha1-201ENSMUST00000070797 FlncQ8VHX6 2726 aaKnown RBP7.61□□□□□ -1.19
Pcdha1-201ENSMUST00000070797 Gm2696A0A1W2P709 240 aa7.61□□□□□ -1.19
Pcdha1-201ENSMUST00000070797 VcanQ62059 3357 aa7.6□□□□□ -1.19
Pcdha1-201ENSMUST00000070797 RelnQ60841 3461 aa7.6□□□□□ -1.19
Pcdha1-201ENSMUST00000070797 Myo15aQ9QZZ4 3511 aa7.56□□□□□ -1.2
Pcdha1-201ENSMUST00000070797 ApcQ61315 2845 aa7.56□□□□□ -1.2
Pcdha1-201ENSMUST00000070797 Dchs1E9PVD3 3291 aa7.54□□□□□ -1.2
Pcdha1-201ENSMUST00000070797 Tenm3Q9WTS6 2715 aa7.5□□□□□ -1.21
Pcdha1-201ENSMUST00000070797 Gm17402F6Z0L5 76 aa7.49□□□□□ -1.21
Pcdha1-201ENSMUST00000070797 Gm17416Q30KP4 66 aa7.47□□□□□ -1.21
Pcdha1-201ENSMUST00000070797 Srrm2Q8BTI8 2703 aaKnown RBP7.47□□□□□ -1.21
Pcdha1-201ENSMUST00000070797 Celsr2Q9R0M0 2920 aa7.44□□□□□ -1.22
Pcdha1-201ENSMUST00000070797 SpegQ62407 3262 aa7.44□□□□□ -1.22
Pcdha1-201ENSMUST00000070797 Akap9Q70FJ1 3797 aa7.43□□□□□ -1.22
Pcdha1-201ENSMUST00000070797 Chd9Q8BYH8 2885 aa7.39□□□□□ -1.23
Pcdha1-201ENSMUST00000070797 Csmd1Q923L3 3564 aa7.38□□□□□ -1.23
Pcdha1-201ENSMUST00000070797 Gm884A2A9H6 3643 aa7.37□□□□□ -1.23
Pcdha1-201ENSMUST00000070797 Nf1Q04690 2841 aa7.35□□□□□ -1.23
Pcdha1-201ENSMUST00000070797 2210017I01RikA0A0A6YVV1 95 aa7.32□□□□□ -1.24
Pcdha1-201ENSMUST00000070797 Pdzd2E9Q1M1 2796 aa7.29□□□□□ -1.24
Pcdha1-201ENSMUST00000070797 Zfhx4Q9JJN2 3550 aa7.28□□□□□ -1.24
Pcdha1-201ENSMUST00000070797 SpenQ62504 3644 aaKnown RBP7.25□□□□□ -1.25
Pcdha1-201ENSMUST00000070797 OtogO55225 2910 aa7.24□□□□□ -1.25
Pcdha1-201ENSMUST00000070797 Smg1Q8BKX6 3658 aaKnown RBP7.23□□□□□ -1.25
Pcdha1-201ENSMUST00000070797 LrbaQ9ESE1 2856 aa7.21□□□□□ -1.26
Pcdha1-201ENSMUST00000070797 Lama5Q61001 3718 aa7.17□□□□□ -1.26
Pcdha1-201ENSMUST00000070797 Krtap3-2Q9D638 99 aa7.13□□□□□ -1.27
Pcdha1-201ENSMUST00000070797 Krtap3-3Q9D7P0 99 aa7.13□□□□□ -1.27
Pcdha1-201ENSMUST00000070797 Helz2E9QAM5 2947 aaKnown RBP7.1□□□□□ -1.27
Pcdha1-201ENSMUST00000070797 Gm11939A2A592 99 aa7.08□□□□□ -1.28
Pcdha1-201ENSMUST00000070797 Muc5acE9QAQ8 3455 aa7.04□□□□□ -1.28
Pcdha1-201ENSMUST00000070797 Tenm1Q9WTS4 2731 aa7.04□□□□□ -1.28
Pcdha1-201ENSMUST00000070797 Ank2Q8C8R3 3898 aa7.01□□□□□ -1.29
Pcdha1-201ENSMUST00000070797 Tenm2Q9WTS5 2764 aa6.97□□□□□ -1.29
Pcdha1-201ENSMUST00000070797 Krtap3-1A2A591 98 aa6.93□□□□□ -1.3
Pcdha1-201ENSMUST00000070797 4933428G20RikQ9D3X4 101 aa6.91□□□□□ -1.3
Pcdha1-201ENSMUST00000070797 Gm19668J3QMD1 248 aa6.9□□□□□ -1.31
Pcdha1-201ENSMUST00000070797 Cmya5Q70KF4 3739 aa6.88□□□□□ -1.31
Pcdha1-201ENSMUST00000070797 Gm9736A0A1W2P7N1 277 aa6.88□□□□□ -1.31
Pcdha1-201ENSMUST00000070797 Svep1A2AVA0 3567 aa6.84□□□□□ -1.32
Pcdha1-201ENSMUST00000070797 Fbn1Q61554 2873 aaKnown RBP6.83□□□□□ -1.32
Pcdha1-201ENSMUST00000070797 Krtap13-1Q8K198 168 aa6.79□□□□□ -1.32
Pcdha1-201ENSMUST00000070797 Megf8P60882 2789 aa6.74□□□□□ -1.33
Pcdha1-201ENSMUST00000070797 Krtap7-1Q9D3I6 87 aa6.72□□□□□ -1.33
Pcdha1-201ENSMUST00000070797 Gm9918Q8BUR5 174 aa6.71□□□□□ -1.34
Pcdha1-201ENSMUST00000070797 Krtap19-5O08632 62 aa6.63□□□□□ -1.35
Pcdha1-201ENSMUST00000070797 VwfQ8CIZ8 2813 aa6.61□□□□□ -1.35
Pcdha1-201ENSMUST00000070797 LystP97412 3788 aa6.56□□□□□ -1.36
Pcdha1-201ENSMUST00000070797 Muc4Q8JZM8 3443 aa6.56□□□□□ -1.36
Pcdha1-201ENSMUST00000070797 Dnah14A0A140LIJ4 4489 aa6.51□□□□□ -1.37
Pcdha1-201ENSMUST00000070797 Sprr2a3Q4KL71 83 aa6.49□□□□□ -1.37
Pcdha1-201ENSMUST00000070797 Sprr2a1Q9CQK8 83 aa6.49□□□□□ -1.37
Pcdha1-201ENSMUST00000070797 Gm10318A0A1W2P728 225 aa6.46□□□□□ -1.38
Pcdha1-201ENSMUST00000070797 Dnah17Q69Z23 4481 aa6.44□□□□□ -1.38
Pcdha1-201ENSMUST00000070797 Csmd2V9GX34 3611 aa6.41□□□□□ -1.38
Pcdha1-201ENSMUST00000070797 Crct1Q6PAI5 102 aa6.41□□□□□ -1.38
Pcdha1-201ENSMUST00000070797 Col7a1Q63870 2944 aa6.4□□□□□ -1.38
Pcdha1-201ENSMUST00000070797 Huwe1Q7TMY8 4377 aaKnown RBP6.4□□□□□ -1.38
Pcdha1-201ENSMUST00000070797 Krtap1-5A2A590 122 aa6.35□□□□□ -1.39
Pcdha1-201ENSMUST00000070797 BsnO88737 3942 aa6.32□□□□□ -1.4
Pcdha1-201ENSMUST00000070797 Xirp2Q4U4S6 3784 aa6.28□□□□□ -1.4
Pcdha1-201ENSMUST00000070797 Muc6Q80T03 2850 aa6.23□□□□□ -1.41
Pcdha1-201ENSMUST00000070797 Dnah10D3YYQ8 4591 aa6.23□□□□□ -1.41
Pcdha1-201ENSMUST00000070797 Vps13dB1ART2 4390 aa6.15□□□□□ -1.42
Pcdha1-201ENSMUST00000070797 Dnah5Q8VHE6 4621 aa6.15□□□□□ -1.42
Pcdha1-201ENSMUST00000070797 Dnah3Q8BW94 4083 aa6.13□□□□□ -1.43
Pcdha1-201ENSMUST00000070797 Dnah11E9Q7N9 4488 aa6.13□□□□□ -1.43
Pcdha1-201ENSMUST00000070797 PlecQ9QXS1 4691 aaKnown RBP6.11□□□□□ -1.43
Pcdha1-201ENSMUST00000070797 Gm19402J3QJV4 266 aa6.11□□□□□ -1.43
Pcdha1-201ENSMUST00000070797 Gm18596A0A1W2P860 280 aa6.08□□□□□ -1.44
Pcdha1-201ENSMUST00000070797 CubnQ9JLB4 3623 aa6.08□□□□□ -1.44
Pcdha1-201ENSMUST00000070797 Krtap19-9aF8WH65 55 aa6.05□□□□□ -1.44
Pcdha1-201ENSMUST00000070797 Dync2h1Q45VK7 4306 aa6.04□□□□□ -1.44
Pcdha1-201ENSMUST00000070797 Hspg2Q05793 3707 aaKnown RBP6.04□□□□□ -1.44
Pcdha1-201ENSMUST00000070797 Krtap1-4Q3V2D6 188 aa6.04□□□□□ -1.44
Pcdha1-201ENSMUST00000070797 Stard9Q80TF6 4561 aa6.03□□□□□ -1.44
Retrieved 100 of 22,080 RNA–protein pairs in 58.2 ms