RNA–Protein interactions for RNA: ENSMUST00000049074.12

Ptprf-201, Transcript of Receptor-type tyrosine-protein phosphatase F, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ptprf, Length 7,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptprf-201ENSMUST00000049074 Romo1P60603 79 aa9.95□□□□□ -0.82
Ptprf-201ENSMUST00000049074 ApcQ61315 2845 aa9.95□□□□□ -0.82
Ptprf-201ENSMUST00000049074 SpegQ62407 3262 aa9.94□□□□□ -0.82
Ptprf-201ENSMUST00000049074 Gm5965D3Z724 196 aa9.93□□□□□ -0.82
Ptprf-201ENSMUST00000049074 Gm10382Q3V0T5 144 aa9.93□□□□□ -0.82
Ptprf-201ENSMUST00000049074 Srrm2Q8BTI8 2703 aaKnown RBP9.91□□□□□ -0.82
Ptprf-201ENSMUST00000049074 VcanQ62059 3357 aa9.89□□□□□ -0.83
Ptprf-201ENSMUST00000049074 Zzef1Q5SSH7 2924 aa9.88□□□□□ -0.83
Ptprf-201ENSMUST00000049074 Gm2310J3QNJ2 377 aa9.86□□□□□ -0.83
Ptprf-201ENSMUST00000049074 DspE9Q557 2883 aaKnown RBP9.84□□□□□ -0.83
Ptprf-201ENSMUST00000049074 Trank1Q8BV79 2999 aa9.81□□□□□ -0.84
Ptprf-201ENSMUST00000049074 Chd9Q8BYH8 2885 aa9.8□□□□□ -0.84
Ptprf-201ENSMUST00000049074 Celsr2Q9R0M0 2920 aa9.75□□□□□ -0.85
Ptprf-201ENSMUST00000049074 Nf1Q04690 2841 aa9.74□□□□□ -0.85
Ptprf-201ENSMUST00000049074 Rps29P62274 56 aa9.71□□□□□ -0.85
Ptprf-201ENSMUST00000049074 Gm3646F6S692 53 aa9.69□□□□□ -0.86
Ptprf-201ENSMUST00000049074 A930033H14RikG5E8X6 103 aa9.66□□□□□ -0.86
Ptprf-201ENSMUST00000049074 Gm21887J3QQ04 176 aa9.66□□□□□ -0.86
Ptprf-201ENSMUST00000049074 Tenm1Q9WTS4 2731 aa9.63□□□□□ -0.87
Ptprf-201ENSMUST00000049074 Pdzd2E9Q1M1 2796 aa9.63□□□□□ -0.87
Ptprf-201ENSMUST00000049074 LrbaQ9ESE1 2856 aa9.61□□□□□ -0.87
Ptprf-201ENSMUST00000049074 Akap9Q70FJ1 3797 aa9.59□□□□□ -0.87
Ptprf-201ENSMUST00000049074 TgO08710 2766 aa9.58□□□□□ -0.88
Ptprf-201ENSMUST00000049074 D6Ertd527eA0A0N4SWI3 464 aa9.57□□□□□ -0.88
Ptprf-201ENSMUST00000049074 Cox6b2Q80ZN9 88 aa9.56□□□□□ -0.88
Ptprf-201ENSMUST00000049074 Wdfy3Q6VNB8 3508 aa9.51□□□□□ -0.89
Ptprf-201ENSMUST00000049074 Muc5acE9QAQ8 3455 aa9.46□□□□□ -0.9
Ptprf-201ENSMUST00000049074 RelnQ60841 3461 aa9.44□□□□□ -0.9
Ptprf-201ENSMUST00000049074 Gm9918Q8BUR5 174 aa9.43□□□□□ -0.9
Ptprf-201ENSMUST00000049074 DmdP11531 3678 aa9.42□□□□□ -0.9
Ptprf-201ENSMUST00000049074 Vps13cQ8BX70 3748 aa9.42□□□□□ -0.9
Ptprf-201ENSMUST00000049074 Tenm2Q9WTS5 2764 aa9.38□□□□□ -0.91
Ptprf-201ENSMUST00000049074 Gm9736A0A1W2P7N1 277 aa9.37□□□□□ -0.91
Ptprf-201ENSMUST00000049074 Tnp1P10856 55 aa9.3□□□□□ -0.92
Ptprf-201ENSMUST00000049074 OtogO55225 2910 aa9.25□□□□□ -0.93
Ptprf-201ENSMUST00000049074 Gm10318A0A1W2P728 225 aa9.21□□□□□ -0.93
Ptprf-201ENSMUST00000049074 Tenm3Q9WTS6 2715 aa9.21□□□□□ -0.94
Ptprf-201ENSMUST00000049074 Smg1Q8BKX6 3658 aaKnown RBP9.19□□□□□ -0.94
Ptprf-201ENSMUST00000049074 4933415A04RikQ9D443 101 aa9.14□□□□□ -0.95
Ptprf-201ENSMUST00000049074 VwfQ8CIZ8 2813 aa9.11□□□□□ -0.95
Ptprf-201ENSMUST00000049074 Csmd1Q923L3 3564 aa9.06□□□□□ -0.96
Ptprf-201ENSMUST00000049074 1700042G07RikB1AUF7 90 aa9.01□□□□□ -0.97
Ptprf-201ENSMUST00000049074 Megf8P60882 2789 aa9□□□□□ -0.97
Ptprf-201ENSMUST00000049074 Helz2E9QAM5 2947 aaKnown RBP9□□□□□ -0.97
Ptprf-201ENSMUST00000049074 Ndufaf8A2AMZ4 74 aa9□□□□□ -0.97
Ptprf-201ENSMUST00000049074 Crct1Q6PAI5 102 aa8.98□□□□□ -0.97
Ptprf-201ENSMUST00000049074 Prm2P07978 107 aa8.98□□□□□ -0.97
Ptprf-201ENSMUST00000049074 Col7a1Q63870 2944 aa8.97□□□□□ -0.97
Ptprf-201ENSMUST00000049074 Lama5Q61001 3718 aa8.97□□□□□ -0.97
Ptprf-201ENSMUST00000049074 Zfhx4Q9JJN2 3550 aa8.94□□□□□ -0.98
Ptprf-201ENSMUST00000049074 B930094E09RikQ8C4T2 136 aa8.85□□□□□ -0.99
Ptprf-201ENSMUST00000049074 Gm20537G3UYK7 97 aa8.77□□□□□ -1.01
Ptprf-201ENSMUST00000049074 SpenQ62504 3644 aaKnown RBP8.76□□□□□ -1.01
Ptprf-201ENSMUST00000049074 Csmd2V9GX34 3611 aa8.71□□□□□ -1.01
Ptprf-201ENSMUST00000049074 Cmya5Q70KF4 3739 aa8.69□□□□□ -1.02
Ptprf-201ENSMUST00000049074 Gm40193A0A1B0GT39 78 aa8.69□□□□□ -1.02
Ptprf-201ENSMUST00000049074 4933428G20RikQ9D3X4 101 aa8.63□□□□□ -1.03
Ptprf-201ENSMUST00000049074 Gm9112A2AI92 75 aa8.62□□□□□ -1.03
Ptprf-201ENSMUST00000049074 Krtap19-5O08632 62 aa8.56□□□□□ -1.04
Ptprf-201ENSMUST00000049074 Gm17416Q30KP4 66 aa8.56□□□□□ -1.04
Ptprf-201ENSMUST00000049074 2310079G19RikQ9D6L6 185 aa8.52□□□□□ -1.05
Ptprf-201ENSMUST00000049074 2210017I01RikA0A0A6YVV1 95 aa8.48□□□□□ -1.05
Ptprf-201ENSMUST00000049074 Gm884A2A9H6 3643 aa8.47□□□□□ -1.05
Ptprf-201ENSMUST00000049074 Svep1A2AVA0 3567 aa8.45□□□□□ -1.06
Ptprf-201ENSMUST00000049074 Fbn1Q61554 2873 aaKnown RBP8.39□□□□□ -1.07
Ptprf-201ENSMUST00000049074 Gm19668J3QMD1 248 aa8.38□□□□□ -1.07
Ptprf-201ENSMUST00000049074 Muc4Q8JZM8 3443 aa8.37□□□□□ -1.07
Ptprf-201ENSMUST00000049074 SmcpP15265 143 aa8.36□□□□□ -1.07
Ptprf-201ENSMUST00000049074 Ank2Q8C8R3 3898 aa8.36□□□□□ -1.07
Ptprf-201ENSMUST00000049074 Muc6Q80T03 2850 aa8.31□□□□□ -1.08
Ptprf-201ENSMUST00000049074 Krtap13-1Q8K198 168 aa8.3□□□□□ -1.08
Ptprf-201ENSMUST00000049074 Gm18596A0A1W2P860 280 aa8.3□□□□□ -1.08
Ptprf-201ENSMUST00000049074 Gm6358A0A087WPH4 74 aa8.3□□□□□ -1.08
Ptprf-201ENSMUST00000049074 Sprr2kO70562 68 aa8.24□□□□□ -1.09
Ptprf-201ENSMUST00000049074 LystP97412 3788 aa8.16□□□□□ -1.1
Ptprf-201ENSMUST00000049074 Gm17402F6Z0L5 76 aa8.14□□□□□ -1.11
Ptprf-201ENSMUST00000049074 Gm11939A2A592 99 aa8.11□□□□□ -1.11
Ptprf-201ENSMUST00000049074 CubnQ9JLB4 3623 aa7.97□□□□□ -1.13
Ptprf-201ENSMUST00000049074 Krtap8-1O08633 61 aa7.92□□□□□ -1.14
Ptprf-201ENSMUST00000049074 LorP18165 486 aa7.92□□□□□ -1.14
Ptprf-201ENSMUST00000049074 Gm19402J3QJV4 266 aa7.91□□□□□ -1.14
Ptprf-201ENSMUST00000049074 Huwe1Q7TMY8 4377 aaKnown RBP7.88□□□□□ -1.15
Ptprf-201ENSMUST00000049074 Csmd3Q80T79 3707 aa7.86□□□□□ -1.15
Ptprf-201ENSMUST00000049074 Sprr2gO70558 76 aa7.75□□□□□ -1.17
Ptprf-201ENSMUST00000049074 Krtap3-1A2A591 98 aa7.75□□□□□ -1.17
Ptprf-201ENSMUST00000049074 Hspg2Q05793 3707 aaKnown RBP7.71□□□□□ -1.18
Ptprf-201ENSMUST00000049074 Dnah14A0A140LIJ4 4489 aa7.67□□□□□ -1.18
Ptprf-201ENSMUST00000049074 Krtap19-9aF8WH65 55 aa7.59□□□□□ -1.19
Ptprf-201ENSMUST00000049074 Krtap7-1Q9D3I6 87 aa7.59□□□□□ -1.2
Ptprf-201ENSMUST00000049074 BsnO88737 3942 aa7.55□□□□□ -1.2
Ptprf-201ENSMUST00000049074 Krtap3-2Q9D638 99 aa7.48□□□□□ -1.21
Ptprf-201ENSMUST00000049074 Krtap3-3Q9D7P0 99 aa7.48□□□□□ -1.21
Ptprf-201ENSMUST00000049074 Dnah10D3YYQ8 4591 aa7.43□□□□□ -1.22
Ptprf-201ENSMUST00000049074 Lce1mQ9CR91 182 aa7.37□□□□□ -1.23
Ptprf-201ENSMUST00000049074 Xirp2Q4U4S6 3784 aa7.37□□□□□ -1.23
Ptprf-201ENSMUST00000049074 Krtap1-5A2A590 122 aa7.35□□□□□ -1.23
Ptprf-201ENSMUST00000049074 Krtap1-4Q3V2D6 188 aa7.33□□□□□ -1.24
Ptprf-201ENSMUST00000049074 2310046K23RikA0A0A6YVW6 87 aa7.2□□□□□ -1.26
Ptprf-201ENSMUST00000049074 Krtap12-1Q9Z287 130 aa7.19□□□□□ -1.26
Ptprf-201ENSMUST00000049074 Dnah5Q8VHE6 4621 aa7.19□□□□□ -1.26
Retrieved 100 of 22,080 RNA–protein pairs in 96 ms