RNA–Protein interactions for RNA: ENSMUST00000039280.7

Scaf4-201, Transcript of SR-related CTD-associated factor 4, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Scaf4, Length 4,165 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4-201ENSMUST00000039280 OxtP35454 125 aa9.21□□□□□ -0.94
Scaf4-201ENSMUST00000039280 Cypt15B1AXS0 87 aa9.2□□□□□ -0.94
Scaf4-201ENSMUST00000039280 Defb1P56386 69 aa9.19□□□□□ -0.94
Scaf4-201ENSMUST00000039280 Cypt14J3QPF7 87 aa9.19□□□□□ -0.94
Scaf4-201ENSMUST00000039280 Odf3bQ5M8M2 238 aa9.18□□□□□ -0.94
Scaf4-201ENSMUST00000039280 Ank2Q8C8R3 3898 aa9.16□□□□□ -0.94
Scaf4-201ENSMUST00000039280 VwfQ8CIZ8 2813 aa9.15□□□□□ -0.94
Scaf4-201ENSMUST00000039280 Krtap10-4Q08EG8 221 aa9.14□□□□□ -0.95
Scaf4-201ENSMUST00000039280 Q8BGJ3 129 aa9.14□□□□□ -0.95
Scaf4-201ENSMUST00000039280 2310050C09RikG5E8Z3 280 aa9.13□□□□□ -0.95
Scaf4-201ENSMUST00000039280 Gm21798J3QNU5 87 aa9.1□□□□□ -0.95
Scaf4-201ENSMUST00000039280 Krtap29-1A2A5X4 342 aa9.08□□□□□ -0.96
Scaf4-201ENSMUST00000039280 Krtap13O88375 197 aa9.05□□□□□ -0.96
Scaf4-201ENSMUST00000039280 Gm2310J3QNJ2 377 aa9.03□□□□□ -0.96
Scaf4-201ENSMUST00000039280 4930507D05RikQ8C9C9 103 aa9□□□□□ -0.97
Scaf4-201ENSMUST00000039280 Gm9821Q8K076 103 aa9□□□□□ -0.97
Scaf4-201ENSMUST00000039280 Gm16253D3Z167 63 aa8.98□□□□□ -0.97
Scaf4-201ENSMUST00000039280 2310034C09RikQ9D746 214 aa8.98□□□□□ -0.97
Scaf4-201ENSMUST00000039280 CubnQ9JLB4 3623 aa8.97□□□□□ -0.97
Scaf4-201ENSMUST00000039280 LystP97412 3788 aa8.96□□□□□ -0.97
Scaf4-201ENSMUST00000039280 Krtap14O08640 167 aa8.94□□□□□ -0.98
Scaf4-201ENSMUST00000039280 Krtap10-10A0A1W2P7T6 217 aa8.94□□□□□ -0.98
Scaf4-201ENSMUST00000039280 Tenm2Q9WTS5 2764 aa8.88□□□□□ -0.99
Scaf4-201ENSMUST00000039280 Gm12216A0A1W2P827 62 aa8.87□□□□□ -0.99
Scaf4-201ENSMUST00000039280 Muc6Q80T03 2850 aa8.84□□□□□ -0.99
Scaf4-201ENSMUST00000039280 Gm2696A0A1W2P709 240 aa8.8□□□□□ -1
Scaf4-201ENSMUST00000039280 Tnp2P11378 117 aa8.8□□□□□ -1
Scaf4-201ENSMUST00000039280 Xirp2Q4U4S6 3784 aa8.79□□□□□ -1
Scaf4-201ENSMUST00000039280 BsnO88737 3942 aa8.76□□□□□ -1.01
Scaf4-201ENSMUST00000039280 Gm17606F6ZL36 78 aa8.75□□□□□ -1.01
Scaf4-201ENSMUST00000039280 Gm3880A0A1B0GSB3 72 aa8.73□□□□□ -1.01
Scaf4-201ENSMUST00000039280 Gm4491E0CX42 125 aa8.66□□□□□ -1.02
Scaf4-201ENSMUST00000039280 Mp68P56379 58 aa8.64□□□□□ -1.03
Scaf4-201ENSMUST00000039280 Rnase13Q5GAM7 153 aa8.6□□□□□ -1.03
Scaf4-201ENSMUST00000039280 Megf8P60882 2789 aa8.57□□□□□ -1.04
Scaf4-201ENSMUST00000039280 CriptO70333 101 aa8.52□□□□□ -1.04
Scaf4-201ENSMUST00000039280 Dnah14A0A140LIJ4 4489 aa8.52□□□□□ -1.05
Scaf4-201ENSMUST00000039280 Krtap15-1Q9QZU5 150 aa8.52□□□□□ -1.05
Scaf4-201ENSMUST00000039280 Gm9918Q8BUR5 174 aa8.47□□□□□ -1.05
Scaf4-201ENSMUST00000039280 Pla2g10Q9QXX3 151 aa8.46□□□□□ -1.05
Scaf4-201ENSMUST00000039280 Gm9955Q8CEJ8 102 aa8.43□□□□□ -1.06
Scaf4-201ENSMUST00000039280 Hspg2Q05793 3707 aaKnown RBP8.42□□□□□ -1.06
Scaf4-201ENSMUST00000039280 Gm5767A0A0J9YTU8 78 aa8.42□□□□□ -1.06
Scaf4-201ENSMUST00000039280 Gm20538F6Z9R1 75 aa8.4□□□□□ -1.06
Scaf4-201ENSMUST00000039280 D6Ertd527eA0A0N4SWI3 464 aa8.34□□□□□ -1.07
Scaf4-201ENSMUST00000039280 Rps29P62274 56 aa8.32□□□□□ -1.08
Scaf4-201ENSMUST00000039280 Dnah10D3YYQ8 4591 aa8.32□□□□□ -1.08
Scaf4-201ENSMUST00000039280 Romo1P60603 79 aa8.24□□□□□ -1.09
Scaf4-201ENSMUST00000039280 Cox6b2Q80ZN9 88 aa8.23□□□□□ -1.09
Scaf4-201ENSMUST00000039280 2310079G19RikQ9D6L6 185 aa8.22□□□□□ -1.09
Scaf4-201ENSMUST00000039280 Rpl37Q9D823 97 aa8.22□□□□□ -1.09
Scaf4-201ENSMUST00000039280 Huwe1Q7TMY8 4377 aaKnown RBP8.18□□□□□ -1.1
Scaf4-201ENSMUST00000039280 Gm20537G3UYK7 97 aa8.17□□□□□ -1.1
Scaf4-201ENSMUST00000039280 Gm10382Q3V0T5 144 aa8.17□□□□□ -1.1
Scaf4-201ENSMUST00000039280 Gm5965D3Z724 196 aa8.16□□□□□ -1.1
Scaf4-201ENSMUST00000039280 Dnah17Q69Z23 4481 aa8.1□□□□□ -1.11
Scaf4-201ENSMUST00000039280 Csmd3Q80T79 3707 aa8.09□□□□□ -1.11
Scaf4-201ENSMUST00000039280 A930033H14RikG5E8X6 103 aa8.07□□□□□ -1.12
Scaf4-201ENSMUST00000039280 Dnah7bL7N1Y0 4068 aa8.07□□□□□ -1.12
Scaf4-201ENSMUST00000039280 Gm9736A0A1W2P7N1 277 aa8.02□□□□□ -1.13
Scaf4-201ENSMUST00000039280 Sec61bQ9CQS8 96 aaKnown RBP8.01□□□□□ -1.13
Scaf4-201ENSMUST00000039280 PlecQ9QXS1 4691 aaKnown RBP7.98□□□□□ -1.13
Scaf4-201ENSMUST00000039280 Spink7Q6IE32 76 aa7.96□□□□□ -1.14
Scaf4-201ENSMUST00000039280 Fam229aB2KGE5 128 aa7.92□□□□□ -1.14
Scaf4-201ENSMUST00000039280 Dnah11E9Q7N9 4488 aa7.9□□□□□ -1.14
Scaf4-201ENSMUST00000039280 Ndufaf8A2AMZ4 74 aa7.89□□□□□ -1.15
Scaf4-201ENSMUST00000039280 Gm11939A2A592 99 aa7.88□□□□□ -1.15
Scaf4-201ENSMUST00000039280 BC029722A0A0N4SW31 51 aa7.87□□□□□ -1.15
Scaf4-201ENSMUST00000039280 Dnah9B1AR51 4484 aa7.86□□□□□ -1.15
Scaf4-201ENSMUST00000039280 TnxbO35452 4006 aa7.86□□□□□ -1.15
Scaf4-201ENSMUST00000039280 Gm19426M0QWC7 77 aa7.85□□□□□ -1.15
Scaf4-201ENSMUST00000039280 Krtap19-5O08632 62 aa7.82□□□□□ -1.16
Scaf4-201ENSMUST00000039280 Dnah5Q8VHE6 4621 aa7.82□□□□□ -1.16
Scaf4-201ENSMUST00000039280 2310057N15RikQ9D6T8 200 aa7.82□□□□□ -1.16
Scaf4-201ENSMUST00000039280 Krtap3-2Q9D638 99 aa7.8□□□□□ -1.16
Scaf4-201ENSMUST00000039280 Krtap3-3Q9D7P0 99 aa7.8□□□□□ -1.16
Scaf4-201ENSMUST00000039280 Vps13dB1ART2 4390 aa7.79□□□□□ -1.16
Scaf4-201ENSMUST00000039280 Dnah6E9Q0B6 4144 aa7.79□□□□□ -1.16
Scaf4-201ENSMUST00000039280 Dnah3Q8BW94 4083 aa7.77□□□□□ -1.16
Scaf4-201ENSMUST00000039280 Kmt2aP55200 3966 aa7.77□□□□□ -1.17
Scaf4-201ENSMUST00000039280 PrkdcP97313 4128 aa7.73□□□□□ -1.17
Scaf4-201ENSMUST00000039280 Dync2h1Q45VK7 4306 aa7.65□□□□□ -1.18
Scaf4-201ENSMUST00000039280 Stard9Q80TF6 4561 aa7.65□□□□□ -1.19
Scaf4-201ENSMUST00000039280 Gm21887J3QQ04 176 aa7.61□□□□□ -1.19
Scaf4-201ENSMUST00000039280 Gm17416Q30KP4 66 aa7.6□□□□□ -1.19
Scaf4-201ENSMUST00000039280 Prm2P07978 107 aa7.58□□□□□ -1.2
Scaf4-201ENSMUST00000039280 Lrp1bQ9JI18 4599 aa7.56□□□□□ -1.2
Scaf4-201ENSMUST00000039280 Dnah1E9Q8T7 4250 aa7.54□□□□□ -1.2
Scaf4-201ENSMUST00000039280 Camk2n1Q6QWF9 78 aa7.53□□□□□ -1.2
Scaf4-201ENSMUST00000039280 ApobE9Q414 4505 aa7.52□□□□□ -1.21
Scaf4-201ENSMUST00000039280 B930094E09RikQ8C4T2 136 aa7.5□□□□□ -1.21
Scaf4-201ENSMUST00000039280 2210017I01RikA0A0A6YVV1 95 aa7.48□□□□□ -1.21
Scaf4-201ENSMUST00000039280 Dnah2P0C6F1 4456 aa7.44□□□□□ -1.22
Scaf4-201ENSMUST00000039280 Ryr3A2AGL3 4863 aa7.43□□□□□ -1.22
Scaf4-201ENSMUST00000039280 Gm9112A2AI92 75 aa7.43□□□□□ -1.22
Scaf4-201ENSMUST00000039280 Dync1h1Q9JHU4 4644 aaKnown RBP7.43□□□□□ -1.22
Scaf4-201ENSMUST00000039280 Ryr1E9PZQ0 5035 aa7.42□□□□□ -1.22
Scaf4-201ENSMUST00000039280 Gm40193A0A1B0GT39 78 aa7.4□□□□□ -1.22
Scaf4-201ENSMUST00000039280 Gm10318A0A1W2P728 225 aa7.36□□□□□ -1.23
Scaf4-201ENSMUST00000039280 Dnah7cA0A087WR13 4024 aa7.33□□□□□ -1.24
Retrieved 100 of 22,080 RNA–protein pairs in 56.4 ms