RNA–Protein interactions for RNA: ENSMUST00000035237.11

Usp4-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Usp4, Length 3,662 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4-201ENSMUST00000035237 Q8BGJ3 129 aa9.1□□□□□ -0.95
Usp4-201ENSMUST00000035237 Defb10Q8R2I8 73 aa9.09□□□□□ -0.95
Usp4-201ENSMUST00000035237 Cypt15B1AXS0 87 aa9.08□□□□□ -0.96
Usp4-201ENSMUST00000035237 Cypt14J3QPF7 87 aa9.04□□□□□ -0.96
Usp4-201ENSMUST00000035237 Gpr15lA0A0B4J1N3 78 aa9.02□□□□□ -0.97
Usp4-201ENSMUST00000035237 Gm16253D3Z167 63 aa9□□□□□ -0.97
Usp4-201ENSMUST00000035237 Gm10065F6TJM2 114 aa8.99□□□□□ -0.97
Usp4-201ENSMUST00000035237 2310034C09RikQ9D746 214 aa8.98□□□□□ -0.97
Usp4-201ENSMUST00000035237 Gm9821Q8K076 103 aa8.97□□□□□ -0.97
Usp4-201ENSMUST00000035237 Ly6g6cQ9Z1Q4 126 aa8.96□□□□□ -0.97
Usp4-201ENSMUST00000035237 Csmd3Q80T79 3707 aa8.95□□□□□ -0.98
Usp4-201ENSMUST00000035237 NbdyA0A0N4SUI7 68 aa8.95□□□□□ -0.98
Usp4-201ENSMUST00000035237 AW011738F6S7Q2 159 aa8.93□□□□□ -0.98
Usp4-201ENSMUST00000035237 Muc6Q80T03 2850 aa8.93□□□□□ -0.98
Usp4-201ENSMUST00000035237 Megf8P60882 2789 aa8.91□□□□□ -0.98
Usp4-201ENSMUST00000035237 Gm9507D3Z5T3 223 aa8.91□□□□□ -0.98
Usp4-201ENSMUST00000035237 Gm17349F7BGH6 99 aa8.91□□□□□ -0.98
Usp4-201ENSMUST00000035237 Krtap13O88375 197 aa8.88□□□□□ -0.99
Usp4-201ENSMUST00000035237 Tenm2Q9WTS5 2764 aa8.87□□□□□ -0.99
Usp4-201ENSMUST00000035237 Krtap29-1A2A5X4 342 aa8.85□□□□□ -0.99
Usp4-201ENSMUST00000035237 OxtP35454 125 aa8.84□□□□□ -0.99
Usp4-201ENSMUST00000035237 4930507D05RikQ8C9C9 103 aa8.81□□□□□ -1
Usp4-201ENSMUST00000035237 Dnah7bL7N1Y0 4068 aa8.8□□□□□ -1
Usp4-201ENSMUST00000035237 Krtap14O08640 167 aa8.78□□□□□ -1
Usp4-201ENSMUST00000035237 2310050C09RikG5E8Z3 280 aa8.78□□□□□ -1
Usp4-201ENSMUST00000035237 Krtap10-4Q08EG8 221 aa8.77□□□□□ -1.01
Usp4-201ENSMUST00000035237 Dnah14A0A140LIJ4 4489 aa8.76□□□□□ -1.01
Usp4-201ENSMUST00000035237 Dnah10D3YYQ8 4591 aa8.75□□□□□ -1.01
Usp4-201ENSMUST00000035237 FcgbpE9Q0B5 2583 aa8.73□□□□□ -1.01
Usp4-201ENSMUST00000035237 Gm12216A0A1W2P827 62 aa8.68□□□□□ -1.02
Usp4-201ENSMUST00000035237 Gm3880A0A1B0GSB3 72 aa8.67□□□□□ -1.02
Usp4-201ENSMUST00000035237 Tnp2P11378 117 aa8.64□□□□□ -1.03
Usp4-201ENSMUST00000035237 Gm4491E0CX42 125 aa8.6□□□□□ -1.03
Usp4-201ENSMUST00000035237 RetnlbQ99P86 105 aa8.59□□□□□ -1.03
Usp4-201ENSMUST00000035237 CriptO70333 101 aa8.55□□□□□ -1.04
Usp4-201ENSMUST00000035237 Dnah11E9Q7N9 4488 aa8.55□□□□□ -1.04
Usp4-201ENSMUST00000035237 Krtap10-10A0A1W2P7T6 217 aa8.53□□□□□ -1.04
Usp4-201ENSMUST00000035237 Kmt2aP55200 3966 aa8.48□□□□□ -1.05
Usp4-201ENSMUST00000035237 2310079G19RikQ9D6L6 185 aa8.47□□□□□ -1.05
Usp4-201ENSMUST00000035237 D6Ertd527eA0A0N4SWI3 464 aa8.47□□□□□ -1.05
Usp4-201ENSMUST00000035237 Dnah3Q8BW94 4083 aa8.46□□□□□ -1.06
Usp4-201ENSMUST00000035237 Dnah17Q69Z23 4481 aa8.45□□□□□ -1.06
Usp4-201ENSMUST00000035237 Defb11Q8R2I7 77 aa8.45□□□□□ -1.06
Usp4-201ENSMUST00000035237 Pla2g10Q9QXX3 151 aa8.41□□□□□ -1.06
Usp4-201ENSMUST00000035237 Gm17606F6ZL36 78 aa8.39□□□□□ -1.07
Usp4-201ENSMUST00000035237 Dnah9B1AR51 4484 aa8.38□□□□□ -1.07
Usp4-201ENSMUST00000035237 Gm2696A0A1W2P709 240 aa8.37□□□□□ -1.07
Usp4-201ENSMUST00000035237 Mp68P56379 58 aa8.34□□□□□ -1.07
Usp4-201ENSMUST00000035237 Gm20537G3UYK7 97 aa8.31□□□□□ -1.08
Usp4-201ENSMUST00000035237 Gm9918Q8BUR5 174 aa8.31□□□□□ -1.08
Usp4-201ENSMUST00000035237 Huwe1Q7TMY8 4377 aaKnown RBP8.31□□□□□ -1.08
Usp4-201ENSMUST00000035237 Dnah1E9Q8T7 4250 aa8.28□□□□□ -1.08
Usp4-201ENSMUST00000035237 Rnase13Q5GAM7 153 aa8.27□□□□□ -1.08
Usp4-201ENSMUST00000035237 Cox6b2Q80ZN9 88 aa8.26□□□□□ -1.09
Usp4-201ENSMUST00000035237 Dnah5Q8VHE6 4621 aa8.26□□□□□ -1.09
Usp4-201ENSMUST00000035237 A930033H14RikG5E8X6 103 aa8.25□□□□□ -1.09
Usp4-201ENSMUST00000035237 Gm9955Q8CEJ8 102 aa8.25□□□□□ -1.09
Usp4-201ENSMUST00000035237 Dnah6E9Q0B6 4144 aa8.23□□□□□ -1.09
Usp4-201ENSMUST00000035237 Krtap3-2Q9D638 99 aa8.19□□□□□ -1.1
Usp4-201ENSMUST00000035237 Krtap3-3Q9D7P0 99 aa8.19□□□□□ -1.1
Usp4-201ENSMUST00000035237 Romo1P60603 79 aa8.16□□□□□ -1.1
Usp4-201ENSMUST00000035237 Gm10382Q3V0T5 144 aa8.16□□□□□ -1.1
Usp4-201ENSMUST00000035237 Gm20538F6Z9R1 75 aa8.15□□□□□ -1.1
Usp4-201ENSMUST00000035237 PlecQ9QXS1 4691 aaKnown RBP8.15□□□□□ -1.1
Usp4-201ENSMUST00000035237 Rpl37Q9D823 97 aa8.09□□□□□ -1.11
Usp4-201ENSMUST00000035237 Krtap15-1Q9QZU5 150 aa8.07□□□□□ -1.12
Usp4-201ENSMUST00000035237 PrkdcP97313 4128 aa8.07□□□□□ -1.12
Usp4-201ENSMUST00000035237 Gm5767A0A0J9YTU8 78 aa8.04□□□□□ -1.12
Usp4-201ENSMUST00000035237 Dnah7cA0A087WR13 4024 aa8.02□□□□□ -1.13
Usp4-201ENSMUST00000035237 Gm11939A2A592 99 aa7.99□□□□□ -1.13
Usp4-201ENSMUST00000035237 Rps29P62274 56 aa7.99□□□□□ -1.13
Usp4-201ENSMUST00000035237 Lrp1bQ9JI18 4599 aa7.98□□□□□ -1.13
Usp4-201ENSMUST00000035237 Hectd4E9Q2E4 4418 aa7.98□□□□□ -1.13
Usp4-201ENSMUST00000035237 Stard9Q80TF6 4561 aa7.97□□□□□ -1.13
Usp4-201ENSMUST00000035237 Fras1Q80T14 4010 aa7.85□□□□□ -1.15
Usp4-201ENSMUST00000035237 Dnah7aE9Q0T8 4024 aa7.82□□□□□ -1.16
Usp4-201ENSMUST00000035237 Gm5965D3Z724 196 aa7.81□□□□□ -1.16
Usp4-201ENSMUST00000035237 TnxbO35452 4006 aa7.81□□□□□ -1.16
Usp4-201ENSMUST00000035237 Dync2h1Q45VK7 4306 aa7.8□□□□□ -1.16
Usp4-201ENSMUST00000035237 Vps13dB1ART2 4390 aa7.77□□□□□ -1.16
Usp4-201ENSMUST00000035237 Gm9736A0A1W2P7N1 277 aa7.77□□□□□ -1.17
Usp4-201ENSMUST00000035237 Dnah2P0C6F1 4456 aa7.76□□□□□ -1.17
Usp4-201ENSMUST00000035237 Gm21887J3QQ04 176 aa7.76□□□□□ -1.17
Usp4-201ENSMUST00000035237 ApobE9Q414 4505 aa7.75□□□□□ -1.17
Usp4-201ENSMUST00000035237 Gm19426M0QWC7 77 aa7.75□□□□□ -1.17
Usp4-201ENSMUST00000035237 Ndufaf8A2AMZ4 74 aa7.73□□□□□ -1.17
Usp4-201ENSMUST00000035237 Vps13bQ80TY5 3993 aa7.67□□□□□ -1.18
Usp4-201ENSMUST00000035237 Pkd1O08852 4293 aa7.64□□□□□ -1.19
Usp4-201ENSMUST00000035237 BC029722A0A0N4SW31 51 aa7.58□□□□□ -1.2
Usp4-201ENSMUST00000035237 Lrp1Q91ZX7 4545 aaKnown RBP7.58□□□□□ -1.2
Usp4-201ENSMUST00000035237 SacsQ9JLC8 4582 aa7.56□□□□□ -1.2
Usp4-201ENSMUST00000035237 B930094E09RikQ8C4T2 136 aa7.52□□□□□ -1.21
Usp4-201ENSMUST00000035237 Prm2P07978 107 aa7.51□□□□□ -1.21
Usp4-201ENSMUST00000035237 Dync1h1Q9JHU4 4644 aaKnown RBP7.5□□□□□ -1.21
Usp4-201ENSMUST00000035237 Spink7Q6IE32 76 aa7.49□□□□□ -1.21
Usp4-201ENSMUST00000035237 Krtap3-1A2A591 98 aa7.49□□□□□ -1.21
Usp4-201ENSMUST00000035237 2310057N15RikQ9D6T8 200 aa7.47□□□□□ -1.21
Usp4-201ENSMUST00000035237 Gm17416Q30KP4 66 aa7.45□□□□□ -1.22
Usp4-201ENSMUST00000035237 Fam229aB2KGE5 128 aa7.44□□□□□ -1.22
Usp4-201ENSMUST00000035237 Krtap19-5O08632 62 aa7.42□□□□□ -1.22
Retrieved 100 of 22,080 RNA–protein pairs in 90.2 ms