RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Muc6Q80T03 2850 aa6.88□□□□□ -1.31
Topbp1-201ENSMUST00000035164 Defb10Q8R2I8 73 aa6.87□□□□□ -1.31
Topbp1-201ENSMUST00000035164 Gpr15lA0A0B4J1N3 78 aa6.86□□□□□ -1.31
Topbp1-201ENSMUST00000035164 Cypt15B1AXS0 87 aa6.86□□□□□ -1.31
Topbp1-201ENSMUST00000035164 Ly6g6cQ9Z1Q4 126 aa6.86□□□□□ -1.31
Topbp1-201ENSMUST00000035164 Gm2310J3QNJ2 377 aa6.85□□□□□ -1.31
Topbp1-201ENSMUST00000035164 Uqcr11Q9CPX8 56 aa6.85□□□□□ -1.31
Topbp1-201ENSMUST00000035164 2310034C09RikQ9D746 214 aa6.79□□□□□ -1.32
Topbp1-201ENSMUST00000035164 Csmd3Q80T79 3707 aa6.78□□□□□ -1.32
Topbp1-201ENSMUST00000035164 2310061N02RikQ9D6S9 174 aa6.78□□□□□ -1.32
Topbp1-201ENSMUST00000035164 Gm9821Q8K076 103 aa6.76□□□□□ -1.33
Topbp1-201ENSMUST00000035164 Cypt14J3QPF7 87 aa6.75□□□□□ -1.33
Topbp1-201ENSMUST00000035164 Krtap13O88375 197 aa6.75□□□□□ -1.33
Topbp1-201ENSMUST00000035164 Megf8P60882 2789 aa6.75□□□□□ -1.33
Topbp1-201ENSMUST00000035164 Gm9507D3Z5T3 223 aa6.74□□□□□ -1.33
Topbp1-201ENSMUST00000035164 Gm16253D3Z167 63 aa6.72□□□□□ -1.33
Topbp1-201ENSMUST00000035164 Gm10065F6TJM2 114 aa6.71□□□□□ -1.34
Topbp1-201ENSMUST00000035164 Gm17349F7BGH6 99 aa6.7□□□□□ -1.34
Topbp1-201ENSMUST00000035164 NbdyA0A0N4SUI7 68 aa6.69□□□□□ -1.34
Topbp1-201ENSMUST00000035164 OxtP35454 125 aa6.68□□□□□ -1.34
Topbp1-201ENSMUST00000035164 Krtap10-4Q08EG8 221 aa6.68□□□□□ -1.34
Topbp1-201ENSMUST00000035164 4930507D05RikQ8C9C9 103 aa6.66□□□□□ -1.34
Topbp1-201ENSMUST00000035164 Gm3880A0A1B0GSB3 72 aa6.61□□□□□ -1.35
Topbp1-201ENSMUST00000035164 CriptO70333 101 aa6.59□□□□□ -1.35
Topbp1-201ENSMUST00000035164 RetnlbQ99P86 105 aa6.59□□□□□ -1.36
Topbp1-201ENSMUST00000035164 2310050C09RikG5E8Z3 280 aa6.58□□□□□ -1.36
Topbp1-201ENSMUST00000035164 Krtap14O08640 167 aa6.58□□□□□ -1.36
Topbp1-201ENSMUST00000035164 AW011738F6S7Q2 159 aa6.57□□□□□ -1.36
Topbp1-201ENSMUST00000035164 Gm12216A0A1W2P827 62 aa6.57□□□□□ -1.36
Topbp1-201ENSMUST00000035164 Krtap29-1A2A5X4 342 aa6.56□□□□□ -1.36
Topbp1-201ENSMUST00000035164 Dnah10D3YYQ8 4591 aa6.53□□□□□ -1.36
Topbp1-201ENSMUST00000035164 Dnah7bL7N1Y0 4068 aa6.51□□□□□ -1.37
Topbp1-201ENSMUST00000035164 Krtap10-10A0A1W2P7T6 217 aa6.51□□□□□ -1.37
Topbp1-201ENSMUST00000035164 Gm4491E0CX42 125 aa6.48□□□□□ -1.37
Topbp1-201ENSMUST00000035164 Dnah14A0A140LIJ4 4489 aa6.42□□□□□ -1.38
Topbp1-201ENSMUST00000035164 Tnp2P11378 117 aa6.41□□□□□ -1.38
Topbp1-201ENSMUST00000035164 Kmt2aP55200 3966 aa6.41□□□□□ -1.38
Topbp1-201ENSMUST00000035164 Gm17606F6ZL36 78 aa6.41□□□□□ -1.38
Topbp1-201ENSMUST00000035164 Defb11Q8R2I7 77 aa6.38□□□□□ -1.39
Topbp1-201ENSMUST00000035164 Gm2696A0A1W2P709 240 aa6.35□□□□□ -1.39
Topbp1-201ENSMUST00000035164 Mp68P56379 58 aa6.34□□□□□ -1.39
Topbp1-201ENSMUST00000035164 Rnase13Q5GAM7 153 aa6.34□□□□□ -1.39
Topbp1-201ENSMUST00000035164 D6Ertd527eA0A0N4SWI3 464 aa6.33□□□□□ -1.4
Topbp1-201ENSMUST00000035164 Dnah3Q8BW94 4083 aa6.32□□□□□ -1.4
Topbp1-201ENSMUST00000035164 2310079G19RikQ9D6L6 185 aa6.28□□□□□ -1.4
Topbp1-201ENSMUST00000035164 Dnah6E9Q0B6 4144 aa6.27□□□□□ -1.41
Topbp1-201ENSMUST00000035164 Pla2g10Q9QXX3 151 aa6.25□□□□□ -1.41
Topbp1-201ENSMUST00000035164 Dnah11E9Q7N9 4488 aa6.25□□□□□ -1.41
Topbp1-201ENSMUST00000035164 Gm20537G3UYK7 97 aa6.23□□□□□ -1.41
Topbp1-201ENSMUST00000035164 Dnah1E9Q8T7 4250 aa6.21□□□□□ -1.41
Topbp1-201ENSMUST00000035164 Dnah17Q69Z23 4481 aa6.21□□□□□ -1.42
Topbp1-201ENSMUST00000035164 Gm9955Q8CEJ8 102 aa6.2□□□□□ -1.42
Topbp1-201ENSMUST00000035164 Dnah9B1AR51 4484 aa6.2□□□□□ -1.42
Topbp1-201ENSMUST00000035164 Cox6b2Q80ZN9 88 aa6.2□□□□□ -1.42
Topbp1-201ENSMUST00000035164 Gm10382Q3V0T5 144 aa6.17□□□□□ -1.42
Topbp1-201ENSMUST00000035164 Romo1P60603 79 aa6.16□□□□□ -1.42
Topbp1-201ENSMUST00000035164 Gm9918Q8BUR5 174 aa6.15□□□□□ -1.43
Topbp1-201ENSMUST00000035164 Krtap15-1Q9QZU5 150 aa6.15□□□□□ -1.43
Topbp1-201ENSMUST00000035164 Gm20538F6Z9R1 75 aa6.14□□□□□ -1.43
Topbp1-201ENSMUST00000035164 Rpl37Q9D823 97 aa6.12□□□□□ -1.43
Topbp1-201ENSMUST00000035164 Dnah5Q8VHE6 4621 aa6.09□□□□□ -1.43
Topbp1-201ENSMUST00000035164 A930033H14RikG5E8X6 103 aa6.09□□□□□ -1.43
Topbp1-201ENSMUST00000035164 Huwe1Q7TMY8 4377 aaKnown RBP6.09□□□□□ -1.44
Topbp1-201ENSMUST00000035164 Krtap3-2Q9D638 99 aa6.05□□□□□ -1.44
Topbp1-201ENSMUST00000035164 Krtap3-3Q9D7P0 99 aa6.05□□□□□ -1.44
Topbp1-201ENSMUST00000035164 Gm5767A0A0J9YTU8 78 aa6.04□□□□□ -1.44
Topbp1-201ENSMUST00000035164 PrkdcP97313 4128 aa6.03□□□□□ -1.44
Topbp1-201ENSMUST00000035164 Fras1Q80T14 4010 aa6.01□□□□□ -1.45
Topbp1-201ENSMUST00000035164 Dnah7cA0A087WR13 4024 aa6□□□□□ -1.45
Topbp1-201ENSMUST00000035164 PlecQ9QXS1 4691 aaKnown RBP5.98□□□□□ -1.45
Topbp1-201ENSMUST00000035164 Gm11939A2A592 99 aa5.94□□□□□ -1.46
Topbp1-201ENSMUST00000035164 Gm5965D3Z724 196 aa5.93□□□□□ -1.46
Topbp1-201ENSMUST00000035164 Dync2h1Q45VK7 4306 aa5.92□□□□□ -1.46
Topbp1-201ENSMUST00000035164 Lrp1bQ9JI18 4599 aa5.9□□□□□ -1.46
Topbp1-201ENSMUST00000035164 Stard9Q80TF6 4561 aa5.89□□□□□ -1.47
Topbp1-201ENSMUST00000035164 Ndufaf8A2AMZ4 74 aa5.89□□□□□ -1.47
Topbp1-201ENSMUST00000035164 Dnah7aE9Q0T8 4024 aa5.89□□□□□ -1.47
Topbp1-201ENSMUST00000035164 Rps29P62274 56 aa5.89□□□□□ -1.47
Topbp1-201ENSMUST00000035164 Gm9736A0A1W2P7N1 277 aa5.88□□□□□ -1.47
Topbp1-201ENSMUST00000035164 Hectd4E9Q2E4 4418 aa5.87□□□□□ -1.47
Topbp1-201ENSMUST00000035164 Gm21887J3QQ04 176 aa5.86□□□□□ -1.47
Topbp1-201ENSMUST00000035164 TnxbO35452 4006 aa5.85□□□□□ -1.47
Topbp1-201ENSMUST00000035164 Gm19426M0QWC7 77 aa5.85□□□□□ -1.47
Topbp1-201ENSMUST00000035164 Spink7Q6IE32 76 aa5.78□□□□□ -1.48
Topbp1-201ENSMUST00000035164 Vps13dB1ART2 4390 aa5.76□□□□□ -1.49
Topbp1-201ENSMUST00000035164 BC029722A0A0N4SW31 51 aa5.75□□□□□ -1.49
Topbp1-201ENSMUST00000035164 Vps13bQ80TY5 3993 aa5.75□□□□□ -1.49
Topbp1-201ENSMUST00000035164 ApobE9Q414 4505 aa5.72□□□□□ -1.49
Topbp1-201ENSMUST00000035164 Prm2P07978 107 aa5.72□□□□□ -1.49
Topbp1-201ENSMUST00000035164 Pkd1O08852 4293 aa5.72□□□□□ -1.49
Topbp1-201ENSMUST00000035164 Lrp1Q91ZX7 4545 aaKnown RBP5.7□□□□□ -1.5
Topbp1-201ENSMUST00000035164 Dnah2P0C6F1 4456 aa5.7□□□□□ -1.5
Topbp1-201ENSMUST00000035164 2310057N15RikQ9D6T8 200 aa5.7□□□□□ -1.5
Topbp1-201ENSMUST00000035164 Fam229aB2KGE5 128 aa5.65□□□□□ -1.51
Topbp1-201ENSMUST00000035164 B930094E09RikQ8C4T2 136 aa5.64□□□□□ -1.51
Topbp1-201ENSMUST00000035164 Pkhd1E9PZ36 4059 aa5.59□□□□□ -1.51
Topbp1-201ENSMUST00000035164 Fat3Q8BNA6 4555 aa5.58□□□□□ -1.52
Topbp1-201ENSMUST00000035164 Dync1h1Q9JHU4 4644 aaKnown RBP5.57□□□□□ -1.52
Topbp1-201ENSMUST00000035164 Krtap3-1A2A591 98 aa5.56□□□□□ -1.52
Topbp1-201ENSMUST00000035164 Krtap19-5O08632 62 aa5.53□□□□□ -1.52
Retrieved 100 of 22,080 RNA–protein pairs in 210.9 ms