RNA–Protein interactions for RNA: ENSMUST00000033761.12

Hcfc1-201, Transcript of Host cell factor 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Hcfc1, Length 8,138 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1-201ENSMUST00000033761 Myo15aQ9QZZ4 3511 aa5.29□□□□□ -1.56
Hcfc1-201ENSMUST00000033761 Zzef1Q5SSH7 2924 aa5.29□□□□□ -1.56
Hcfc1-201ENSMUST00000033761 Igfn1Q3KNY0 2849 aa5.29□□□□□ -1.56
Hcfc1-201ENSMUST00000033761 SpegQ62407 3262 aa5.27□□□□□ -1.57
Hcfc1-201ENSMUST00000033761 Krtap13O88375 197 aa5.27□□□□□ -1.57
Hcfc1-201ENSMUST00000033761 Trank1Q8BV79 2999 aa5.26□□□□□ -1.57
Hcfc1-201ENSMUST00000033761 Rps29P62274 56 aa5.25□□□□□ -1.57
Hcfc1-201ENSMUST00000033761 VcanQ62059 3357 aa5.25□□□□□ -1.57
Hcfc1-201ENSMUST00000033761 Gm9507D3Z5T3 223 aa5.24□□□□□ -1.57
Hcfc1-201ENSMUST00000033761 SpenQ62504 3644 aaKnown RBP5.24□□□□□ -1.57
Hcfc1-201ENSMUST00000033761 Krtap14O08640 167 aa5.23□□□□□ -1.57
Hcfc1-201ENSMUST00000033761 Srrm2Q8BTI8 2703 aaKnown RBP5.22□□□□□ -1.57
Hcfc1-201ENSMUST00000033761 Chd9Q8BYH8 2885 aa5.21□□□□□ -1.57
Hcfc1-201ENSMUST00000033761 Gm2310J3QNJ2 377 aa5.19□□□□□ -1.58
Hcfc1-201ENSMUST00000033761 DmdP11531 3678 aa5.19□□□□□ -1.58
Hcfc1-201ENSMUST00000033761 Krtap10-4Q08EG8 221 aa5.16□□□□□ -1.58
Hcfc1-201ENSMUST00000033761 Wdfy3Q6VNB8 3508 aa5.15□□□□□ -1.59
Hcfc1-201ENSMUST00000033761 Nf1Q04690 2841 aa5.12□□□□□ -1.59
Hcfc1-201ENSMUST00000033761 Cmya5Q70KF4 3739 aa5.11□□□□□ -1.59
Hcfc1-201ENSMUST00000033761 Celsr2Q9R0M0 2920 aa5.1□□□□□ -1.59
Hcfc1-201ENSMUST00000033761 Tnp2P11378 117 aa5.09□□□□□ -1.6
Hcfc1-201ENSMUST00000033761 SmcpP15265 143 aa5.09□□□□□ -1.6
Hcfc1-201ENSMUST00000033761 FlncQ8VHX6 2726 aaKnown RBP5.08□□□□□ -1.6
Hcfc1-201ENSMUST00000033761 Krtap10-10A0A1W2P7T6 217 aa5.08□□□□□ -1.6
Hcfc1-201ENSMUST00000033761 LrbaQ9ESE1 2856 aa5.07□□□□□ -1.6
Hcfc1-201ENSMUST00000033761 Csmd1Q923L3 3564 aa5.07□□□□□ -1.6
Hcfc1-201ENSMUST00000033761 D6Ertd527eA0A0N4SWI3 464 aa5.07□□□□□ -1.6
Hcfc1-201ENSMUST00000033761 Hivep1Q03172 2688 aa5.06□□□□□ -1.6
Hcfc1-201ENSMUST00000033761 2310061N02RikQ9D6S9 174 aa5.04□□□□□ -1.6
Hcfc1-201ENSMUST00000033761 FcgbpE9Q0B5 2583 aa5.04□□□□□ -1.6
Hcfc1-201ENSMUST00000033761 Pdzd2E9Q1M1 2796 aa5.04□□□□□ -1.6
Hcfc1-201ENSMUST00000033761 Tenm1Q9WTS4 2731 aa5.03□□□□□ -1.6
Hcfc1-201ENSMUST00000033761 TgO08710 2766 aa5.03□□□□□ -1.6
Hcfc1-201ENSMUST00000033761 Gm884A2A9H6 3643 aa5.03□□□□□ -1.6
Hcfc1-201ENSMUST00000033761 Smg1Q8BKX6 3658 aaKnown RBP5□□□□□ -1.61
Hcfc1-201ENSMUST00000033761 Gm2696A0A1W2P709 240 aa4.97□□□□□ -1.61
Hcfc1-201ENSMUST00000033761 Ank2Q8C8R3 3898 aa4.97□□□□□ -1.61
Hcfc1-201ENSMUST00000033761 Gm5965D3Z724 196 aa4.96□□□□□ -1.62
Hcfc1-201ENSMUST00000033761 RelnQ60841 3461 aa4.95□□□□□ -1.62
Hcfc1-201ENSMUST00000033761 2310057N15RikQ9D6T8 200 aa4.95□□□□□ -1.62
Hcfc1-201ENSMUST00000033761 Lama5Q61001 3718 aa4.94□□□□□ -1.62
Hcfc1-201ENSMUST00000033761 Tenm4Q3UHK6 2771 aa4.94□□□□□ -1.62
Hcfc1-201ENSMUST00000033761 Zfhx4Q9JJN2 3550 aa4.92□□□□□ -1.62
Hcfc1-201ENSMUST00000033761 B930094E09RikQ8C4T2 136 aa4.92□□□□□ -1.62
Hcfc1-201ENSMUST00000033761 OtogO55225 2910 aa4.9□□□□□ -1.62
Hcfc1-201ENSMUST00000033761 Gm20537G3UYK7 97 aa4.87□□□□□ -1.63
Hcfc1-201ENSMUST00000033761 Prm2P07978 107 aa4.87□□□□□ -1.63
Hcfc1-201ENSMUST00000033761 Muc5acE9QAQ8 3455 aa4.84□□□□□ -1.64
Hcfc1-201ENSMUST00000033761 4933428G20RikQ9D3X4 101 aa4.84□□□□□ -1.64
Hcfc1-201ENSMUST00000033761 Helz2E9QAM5 2947 aaKnown RBP4.83□□□□□ -1.64
Hcfc1-201ENSMUST00000033761 A930033H14RikG5E8X6 103 aa4.78□□□□□ -1.64
Hcfc1-201ENSMUST00000033761 Csmd2V9GX34 3611 aa4.76□□□□□ -1.65
Hcfc1-201ENSMUST00000033761 Tenm3Q9WTS6 2715 aa4.74□□□□□ -1.65
Hcfc1-201ENSMUST00000033761 VwfQ8CIZ8 2813 aa4.7□□□□□ -1.66
Hcfc1-201ENSMUST00000033761 Fbn1Q61554 2873 aaKnown RBP4.67□□□□□ -1.66
Hcfc1-201ENSMUST00000033761 Gm17402F6Z0L5 76 aa4.67□□□□□ -1.66
Hcfc1-201ENSMUST00000033761 Gm9918Q8BUR5 174 aa4.63□□□□□ -1.67
Hcfc1-201ENSMUST00000033761 Megf8P60882 2789 aa4.62□□□□□ -1.67
Hcfc1-201ENSMUST00000033761 Tenm2Q9WTS5 2764 aa4.61□□□□□ -1.67
Hcfc1-201ENSMUST00000033761 LystP97412 3788 aa4.6□□□□□ -1.67
Hcfc1-201ENSMUST00000033761 Xirp2Q4U4S6 3784 aa4.6□□□□□ -1.67
Hcfc1-201ENSMUST00000033761 BsnO88737 3942 aa4.59□□□□□ -1.68
Hcfc1-201ENSMUST00000033761 Col7a1Q63870 2944 aa4.56□□□□□ -1.68
Hcfc1-201ENSMUST00000033761 Gm19668J3QMD1 248 aa4.54□□□□□ -1.68
Hcfc1-201ENSMUST00000033761 Svep1A2AVA0 3567 aa4.54□□□□□ -1.68
Hcfc1-201ENSMUST00000033761 Gm17416Q30KP4 66 aa4.53□□□□□ -1.68
Hcfc1-201ENSMUST00000033761 Gm9736A0A1W2P7N1 277 aa4.52□□□□□ -1.69
Hcfc1-201ENSMUST00000033761 2310079G19RikQ9D6L6 185 aa4.5□□□□□ -1.69
Hcfc1-201ENSMUST00000033761 2210017I01RikA0A0A6YVV1 95 aa4.45□□□□□ -1.7
Hcfc1-201ENSMUST00000033761 Muc4Q8JZM8 3443 aa4.44□□□□□ -1.7
Hcfc1-201ENSMUST00000033761 CubnQ9JLB4 3623 aa4.4□□□□□ -1.7
Hcfc1-201ENSMUST00000033761 Gm10318A0A1W2P728 225 aa4.36□□□□□ -1.71
Hcfc1-201ENSMUST00000033761 Hspg2Q05793 3707 aaKnown RBP4.35□□□□□ -1.71
Hcfc1-201ENSMUST00000033761 Csmd3Q80T79 3707 aa4.3□□□□□ -1.72
Hcfc1-201ENSMUST00000033761 Muc6Q80T03 2850 aa4.3□□□□□ -1.72
Hcfc1-201ENSMUST00000033761 Crct1Q6PAI5 102 aa4.27□□□□□ -1.73
Hcfc1-201ENSMUST00000033761 Gm6358A0A087WPH4 74 aa4.25□□□□□ -1.73
Hcfc1-201ENSMUST00000033761 Dnah3Q8BW94 4083 aa4.23□□□□□ -1.73
Hcfc1-201ENSMUST00000033761 Krtap13-1Q8K198 168 aa4.22□□□□□ -1.73
Hcfc1-201ENSMUST00000033761 Gm18596A0A1W2P860 280 aa4.21□□□□□ -1.73
Hcfc1-201ENSMUST00000033761 Krtap19-5O08632 62 aa4.19□□□□□ -1.74
Hcfc1-201ENSMUST00000033761 Kmt2aP55200 3966 aa4.15□□□□□ -1.75
Hcfc1-201ENSMUST00000033761 Gm11939A2A592 99 aa4.15□□□□□ -1.75
Hcfc1-201ENSMUST00000033761 Dnah7bL7N1Y0 4068 aa4.13□□□□□ -1.75
Hcfc1-201ENSMUST00000033761 Gm19402J3QJV4 266 aa4.1□□□□□ -1.75
Hcfc1-201ENSMUST00000033761 PrkdcP97313 4128 aa4.08□□□□□ -1.76
Hcfc1-201ENSMUST00000033761 Huwe1Q7TMY8 4377 aaKnown RBP4.05□□□□□ -1.76
Hcfc1-201ENSMUST00000033761 Sprr2kO70562 68 aa4.04□□□□□ -1.76
Hcfc1-201ENSMUST00000033761 Krtap3-1A2A591 98 aa4.03□□□□□ -1.76
Hcfc1-201ENSMUST00000033761 Vps13bQ80TY5 3993 aa4.02□□□□□ -1.77
Hcfc1-201ENSMUST00000033761 Dnah6E9Q0B6 4144 aa4□□□□□ -1.77
Hcfc1-201ENSMUST00000033761 Krtap8-1O08633 61 aa4□□□□□ -1.77
Hcfc1-201ENSMUST00000033761 Krtap7-1Q9D3I6 87 aa3.99□□□□□ -1.77
Hcfc1-201ENSMUST00000033761 TnxbO35452 4006 aa3.99□□□□□ -1.77
Hcfc1-201ENSMUST00000033761 Dnah7cA0A087WR13 4024 aa3.98□□□□□ -1.77
Hcfc1-201ENSMUST00000033761 Dnah7aE9Q0T8 4024 aa3.95□□□□□ -1.78
Hcfc1-201ENSMUST00000033761 Krtap3-2Q9D638 99 aa3.94□□□□□ -1.78
Hcfc1-201ENSMUST00000033761 Krtap3-3Q9D7P0 99 aa3.94□□□□□ -1.78
Hcfc1-201ENSMUST00000033761 Sprr2gO70558 76 aa3.91□□□□□ -1.78
Hcfc1-201ENSMUST00000033761 Krtap19-9aF8WH65 55 aa3.89□□□□□ -1.79
Retrieved 100 of 22,080 RNA–protein pairs in 69.4 ms