RNA–Protein interactions for RNA: ENSMUST00000023352.8

Prkdc-201, Transcript of DNA-dependent protein kinase catalytic subunit, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prkdc, Length 12,647 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prkdc-201ENSMUST00000023352 Lelp1Q9DAE3 120 aa2.73□□□□□ -1.97
Prkdc-201ENSMUST00000023352 Tenm1Q9WTS4 2731 aa2.73□□□□□ -1.97
Prkdc-201ENSMUST00000023352 Gm10382Q3V0T5 144 aa2.71□□□□□ -1.98
Prkdc-201ENSMUST00000023352 RelnQ60841 3461 aa2.71□□□□□ -1.98
Prkdc-201ENSMUST00000023352 DmdP11531 3678 aa2.7□□□□□ -1.98
Prkdc-201ENSMUST00000023352 Dmxl2Q8BPN8 3032 aa2.69□□□□□ -1.98
Prkdc-201ENSMUST00000023352 Muc5acE9QAQ8 3455 aa2.68□□□□□ -1.98
Prkdc-201ENSMUST00000023352 Chd9Q8BYH8 2885 aa2.68□□□□□ -1.98
Prkdc-201ENSMUST00000023352 Krtap14O08640 167 aa2.67□□□□□ -1.98
Prkdc-201ENSMUST00000023352 2310061N02RikQ9D6S9 174 aa2.67□□□□□ -1.98
Prkdc-201ENSMUST00000023352 Tnp2P11378 117 aa2.67□□□□□ -1.98
Prkdc-201ENSMUST00000023352 Tnp1P10856 55 aa2.66□□□□□ -1.98
Prkdc-201ENSMUST00000023352 SpenQ62504 3644 aaKnown RBP2.66□□□□□ -1.98
Prkdc-201ENSMUST00000023352 Krtap15-1Q9QZU5 150 aa2.66□□□□□ -1.98
Prkdc-201ENSMUST00000023352 Csmd1Q923L3 3564 aa2.65□□□□□ -1.98
Prkdc-201ENSMUST00000023352 Adgrg4B7ZCC9 3073 aa2.65□□□□□ -1.98
Prkdc-201ENSMUST00000023352 Celsr2Q9R0M0 2920 aa2.65□□□□□ -1.99
Prkdc-201ENSMUST00000023352 2310050C09RikG5E8Z3 280 aa2.64□□□□□ -1.99
Prkdc-201ENSMUST00000023352 Gm9112A2AI92 75 aa2.64□□□□□ -1.99
Prkdc-201ENSMUST00000023352 Vps13cQ8BX70 3748 aa2.64□□□□□ -1.99
Prkdc-201ENSMUST00000023352 Gm7137J3QMW1 236 aa2.64□□□□□ -1.99
Prkdc-201ENSMUST00000023352 LrbaQ9ESE1 2856 aa2.64□□□□□ -1.99
Prkdc-201ENSMUST00000023352 Gm21887J3QQ04 176 aa2.63□□□□□ -1.99
Prkdc-201ENSMUST00000023352 Celsr1O35161 3034 aa2.63□□□□□ -1.99
Prkdc-201ENSMUST00000023352 Krtap13O88375 197 aa2.63□□□□□ -1.99
Prkdc-201ENSMUST00000023352 Gm7138L7N2C3 230 aa2.62□□□□□ -1.99
Prkdc-201ENSMUST00000023352 Gm3238W4VSP7 230 aa2.62□□□□□ -1.99
Prkdc-201ENSMUST00000023352 Gm884A2A9H6 3643 aa2.62□□□□□ -1.99
Prkdc-201ENSMUST00000023352 Zfhx3Q61329 3726 aa2.62□□□□□ -1.99
Prkdc-201ENSMUST00000023352 Muc4Q8JZM8 3443 aa2.61□□□□□ -1.99
Prkdc-201ENSMUST00000023352 D6Ertd527eA0A0N4SWI3 464 aa2.59□□□□□ -1.99
Prkdc-201ENSMUST00000023352 Megf8P60882 2789 aa2.58□□□□□ -2
Prkdc-201ENSMUST00000023352 Tenm4Q3UHK6 2771 aa2.56□□□□□ -2
Prkdc-201ENSMUST00000023352 Akap9Q70FJ1 3797 aa2.56□□□□□ -2
Prkdc-201ENSMUST00000023352 Smg1Q8BKX6 3658 aaKnown RBP2.55□□□□□ -2
Prkdc-201ENSMUST00000023352 A930033H14RikG5E8X6 103 aa2.55□□□□□ -2
Prkdc-201ENSMUST00000023352 Gm17349F7BGH6 99 aa2.54□□□□□ -2
Prkdc-201ENSMUST00000023352 VwfQ8CIZ8 2813 aa2.53□□□□□ -2
Prkdc-201ENSMUST00000023352 Gm20537G3UYK7 97 aa2.52□□□□□ -2.01
Prkdc-201ENSMUST00000023352 Svep1A2AVA0 3567 aa2.52□□□□□ -2.01
Prkdc-201ENSMUST00000023352 Lama5Q61001 3718 aa2.52□□□□□ -2.01
Prkdc-201ENSMUST00000023352 OtogO55225 2910 aa2.52□□□□□ -2.01
Prkdc-201ENSMUST00000023352 Gm36176A0A1W2P8D5 158 aa2.52□□□□□ -2.01
Prkdc-201ENSMUST00000023352 2310079G19RikQ9D6L6 185 aa2.51□□□□□ -2.01
Prkdc-201ENSMUST00000023352 Gm17402F6Z0L5 76 aa2.51□□□□□ -2.01
Prkdc-201ENSMUST00000023352 Prm2P07978 107 aa2.51□□□□□ -2.01
Prkdc-201ENSMUST00000023352 Helz2E9QAM5 2947 aaKnown RBP2.5□□□□□ -2.01
Prkdc-201ENSMUST00000023352 Gm9508A0A1W2P7W0 230 aa2.5□□□□□ -2.01
Prkdc-201ENSMUST00000023352 Gm17416Q30KP4 66 aa2.5□□□□□ -2.01
Prkdc-201ENSMUST00000023352 Tenm2Q9WTS5 2764 aa2.48□□□□□ -2.01
Prkdc-201ENSMUST00000023352 Gm5965D3Z724 196 aa2.45□□□□□ -2.02
Prkdc-201ENSMUST00000023352 2310057N15RikQ9D6T8 200 aa2.45□□□□□ -2.02
Prkdc-201ENSMUST00000023352 4933428G20RikQ9D3X4 101 aa2.45□□□□□ -2.02
Prkdc-201ENSMUST00000023352 Csmd2V9GX34 3611 aa2.44□□□□□ -2.02
Prkdc-201ENSMUST00000023352 Gm9507D3Z5T3 223 aa2.42□□□□□ -2.02
Prkdc-201ENSMUST00000023352 B930094E09RikQ8C4T2 136 aa2.41□□□□□ -2.02
Prkdc-201ENSMUST00000023352 Muc6Q80T03 2850 aa2.4□□□□□ -2.02
Prkdc-201ENSMUST00000023352 Krtap10-4Q08EG8 221 aa2.39□□□□□ -2.03
Prkdc-201ENSMUST00000023352 Cmya5Q70KF4 3739 aa2.39□□□□□ -2.03
Prkdc-201ENSMUST00000023352 2210017I01RikA0A0A6YVV1 95 aa2.36□□□□□ -2.03
Prkdc-201ENSMUST00000023352 Ank2Q8C8R3 3898 aa2.35□□□□□ -2.03
Prkdc-201ENSMUST00000023352 Fbn1Q61554 2873 aaKnown RBP2.34□□□□□ -2.03
Prkdc-201ENSMUST00000023352 Col7a1Q63870 2944 aa2.33□□□□□ -2.04
Prkdc-201ENSMUST00000023352 Krtap10-10A0A1W2P7T6 217 aa2.33□□□□□ -2.04
Prkdc-201ENSMUST00000023352 CubnQ9JLB4 3623 aa2.3□□□□□ -2.04
Prkdc-201ENSMUST00000023352 Krtap3-2Q9D638 99 aa2.3□□□□□ -2.04
Prkdc-201ENSMUST00000023352 Krtap3-3Q9D7P0 99 aa2.3□□□□□ -2.04
Prkdc-201ENSMUST00000023352 LystP97412 3788 aa2.29□□□□□ -2.04
Prkdc-201ENSMUST00000023352 Gm2696A0A1W2P709 240 aa2.28□□□□□ -2.04
Prkdc-201ENSMUST00000023352 Gm11939A2A592 99 aa2.27□□□□□ -2.05
Prkdc-201ENSMUST00000023352 Gm19668J3QMD1 248 aa2.19□□□□□ -2.06
Prkdc-201ENSMUST00000023352 Krtap7-1Q9D3I6 87 aa2.18□□□□□ -2.06
Prkdc-201ENSMUST00000023352 Hspg2Q05793 3707 aaKnown RBP2.15□□□□□ -2.06
Prkdc-201ENSMUST00000023352 Gm9918Q8BUR5 174 aa2.15□□□□□ -2.07
Prkdc-201ENSMUST00000023352 Xirp2Q4U4S6 3784 aa2.15□□□□□ -2.07
Prkdc-201ENSMUST00000023352 Krtap13-1Q8K198 168 aa2.14□□□□□ -2.07
Prkdc-201ENSMUST00000023352 Krtap3-1A2A591 98 aa2.13□□□□□ -2.07
Prkdc-201ENSMUST00000023352 Krtap19-5O08632 62 aa2.11□□□□□ -2.07
Prkdc-201ENSMUST00000023352 BsnO88737 3942 aa2.1□□□□□ -2.07
Prkdc-201ENSMUST00000023352 Dnah3Q8BW94 4083 aa2.07□□□□□ -2.08
Prkdc-201ENSMUST00000023352 Gm9736A0A1W2P7N1 277 aa2.07□□□□□ -2.08
Prkdc-201ENSMUST00000023352 Krtap1-5A2A590 122 aa2.07□□□□□ -2.08
Prkdc-201ENSMUST00000023352 Sprr2a3Q4KL71 83 aa2.05□□□□□ -2.08
Prkdc-201ENSMUST00000023352 Sprr2a1Q9CQK8 83 aa2.05□□□□□ -2.08
Prkdc-201ENSMUST00000023352 Csmd3Q80T79 3707 aa2.05□□□□□ -2.08
Prkdc-201ENSMUST00000023352 Huwe1Q7TMY8 4377 aaKnown RBP2.04□□□□□ -2.08
Prkdc-201ENSMUST00000023352 TnxbO35452 4006 aa2.03□□□□□ -2.08
Prkdc-201ENSMUST00000023352 Gm10318A0A1W2P728 225 aa2.03□□□□□ -2.09
Prkdc-201ENSMUST00000023352 Dnah14A0A140LIJ4 4489 aa2□□□□□ -2.09
Prkdc-201ENSMUST00000023352 Kmt2aP55200 3966 aa1.97□□□□□ -2.09
Prkdc-201ENSMUST00000023352 Dnah10D3YYQ8 4591 aa1.97□□□□□ -2.09
Prkdc-201ENSMUST00000023352 Dnah7bL7N1Y0 4068 aa1.96□□□□□ -2.1
Prkdc-201ENSMUST00000023352 Crct1Q6PAI5 102 aa1.95□□□□□ -2.1
Prkdc-201ENSMUST00000023352 2310046K23RikA0A0A6YVW6 87 aa1.93□□□□□ -2.1
Prkdc-201ENSMUST00000023352 Ryr1E9PZQ0 5035 aa1.93□□□□□ -2.1
Prkdc-201ENSMUST00000023352 Dnah7cA0A087WR13 4024 aa1.93□□□□□ -2.1
Prkdc-201ENSMUST00000023352 Krtap8-1O08633 61 aa1.92□□□□□ -2.1
Prkdc-201ENSMUST00000023352 Krtap19-9bQ99NG9 58 aa1.92□□□□□ -2.1
Prkdc-201ENSMUST00000023352 Krtap19-9aF8WH65 55 aa1.92□□□□□ -2.1
Prkdc-201ENSMUST00000023352 Dnah5Q8VHE6 4621 aa1.92□□□□□ -2.1
Retrieved 100 of 22,080 RNA–protein pairs in 80.2 ms