RNA–Protein interactions for RNA: ENSMUST00000000109.10

Cntn1-201, Transcript of Contactin-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cntn1, Length 5,646 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1-201ENSMUST00000000109 Pdzd2E9Q1M1 2796 aa3.68□□□□□ -1.82
Cntn1-201ENSMUST00000000109 Krtap24-1G3X9A2 248 aa3.68□□□□□ -1.82
Cntn1-201ENSMUST00000000109 Xirp2Q4U4S6 3784 aa3.68□□□□□ -1.82
Cntn1-201ENSMUST00000000109 Gm9112A2AI92 75 aa3.68□□□□□ -1.82
Cntn1-201ENSMUST00000000109 Gm37013Q8K491 104 aa3.68□□□□□ -1.82
Cntn1-201ENSMUST00000000109 Tenm3Q9WTS6 2715 aa3.67□□□□□ -1.82
Cntn1-201ENSMUST00000000109 Col6a5A6H584 2640 aa3.67□□□□□ -1.82
Cntn1-201ENSMUST00000000109 Gm9955Q8CEJ8 102 aa3.67□□□□□ -1.82
Cntn1-201ENSMUST00000000109 Ndufaf8A2AMZ4 74 aa3.65□□□□□ -1.82
Cntn1-201ENSMUST00000000109 Hspg2Q05793 3707 aaKnown RBP3.65□□□□□ -1.83
Cntn1-201ENSMUST00000000109 Fn1P11276 2477 aaKnown RBP3.65□□□□□ -1.83
Cntn1-201ENSMUST00000000109 Gm7137J3QMW1 236 aa3.64□□□□□ -1.83
Cntn1-201ENSMUST00000000109 A030014E15RikA0A1Y7VJV2 120 aa3.62□□□□□ -1.83
Cntn1-201ENSMUST00000000109 6030445D17RikE9Q8F9 148 aa3.62□□□□□ -1.83
Cntn1-201ENSMUST00000000109 BsnO88737 3942 aa3.61□□□□□ -1.83
Cntn1-201ENSMUST00000000109 Ank2Q8C8R3 3898 aa3.6□□□□□ -1.83
Cntn1-201ENSMUST00000000109 9530053A07RikE9PVG8 2581 aa3.6□□□□□ -1.83
Cntn1-201ENSMUST00000000109 FasnP19096 2504 aaKnown RBP3.6□□□□□ -1.83
Cntn1-201ENSMUST00000000109 Gm7138L7N2C3 230 aa3.59□□□□□ -1.83
Cntn1-201ENSMUST00000000109 Gm3238W4VSP7 230 aa3.59□□□□□ -1.83
Cntn1-201ENSMUST00000000109 Anapc11Q9CPX9 84 aa3.59□□□□□ -1.83
Cntn1-201ENSMUST00000000109 Odf3bQ5M8M2 238 aa3.59□□□□□ -1.84
Cntn1-201ENSMUST00000000109 Igsf10Q3V1M1 2594 aa3.59□□□□□ -1.84
Cntn1-201ENSMUST00000000109 Itpr2Q9Z329 2701 aa3.58□□□□□ -1.84
Cntn1-201ENSMUST00000000109 Defb9Q8R2I6 67 aa3.58□□□□□ -1.84
Cntn1-201ENSMUST00000000109 Gm11565A2A4M7 156 aa3.58□□□□□ -1.84
Cntn1-201ENSMUST00000000109 Pkd1l1Q8R526 2615 aa3.57□□□□□ -1.84
Cntn1-201ENSMUST00000000109 Gm10139O88245 57 aa3.57□□□□□ -1.84
Cntn1-201ENSMUST00000000109 Tenm4Q3UHK6 2771 aa3.56□□□□□ -1.84
Cntn1-201ENSMUST00000000109 Fbn1Q61554 2873 aaKnown RBP3.56□□□□□ -1.84
Cntn1-201ENSMUST00000000109 Sprr1aQ62266 144 aa3.55□□□□□ -1.84
Cntn1-201ENSMUST00000000109 2310057N15RikQ9D6T8 200 aa3.54□□□□□ -1.84
Cntn1-201ENSMUST00000000109 Plac8Q9JI48 112 aa3.54□□□□□ -1.84
Cntn1-201ENSMUST00000000109 Gm4491E0CX42 125 aa3.53□□□□□ -1.84
Cntn1-201ENSMUST00000000109 Gm2310J3QNJ2 377 aa3.53□□□□□ -1.84
Cntn1-201ENSMUST00000000109 VwfQ8CIZ8 2813 aa3.51□□□□□ -1.85
Cntn1-201ENSMUST00000000109 Gm36176A0A1W2P8D5 158 aa3.51□□□□□ -1.85
Cntn1-201ENSMUST00000000109 Tenm1Q9WTS4 2731 aa3.5□□□□□ -1.85
Cntn1-201ENSMUST00000000109 Srrm2Q8BTI8 2703 aaKnown RBP3.49□□□□□ -1.85
Cntn1-201ENSMUST00000000109 Rpl37Q9D823 97 aa3.49□□□□□ -1.85
Cntn1-201ENSMUST00000000109 ApcQ61315 2845 aa3.48□□□□□ -1.85
Cntn1-201ENSMUST00000000109 Tnp2P11378 117 aa3.48□□□□□ -1.85
Cntn1-201ENSMUST00000000109 Gm16253D3Z167 63 aa3.47□□□□□ -1.85
Cntn1-201ENSMUST00000000109 Gm10382Q3V0T5 144 aa3.45□□□□□ -1.86
Cntn1-201ENSMUST00000000109 Gm9508A0A1W2P7W0 230 aa3.44□□□□□ -1.86
Cntn1-201ENSMUST00000000109 TgO08710 2766 aa3.44□□□□□ -1.86
Cntn1-201ENSMUST00000000109 NbdyA0A0N4SUI7 68 aa3.42□□□□□ -1.86
Cntn1-201ENSMUST00000000109 AW011738F6S7Q2 159 aa3.42□□□□□ -1.86
Cntn1-201ENSMUST00000000109 Gm10065F6TJM2 114 aa3.41□□□□□ -1.86
Cntn1-201ENSMUST00000000109 Gm11939A2A592 99 aa3.41□□□□□ -1.86
Cntn1-201ENSMUST00000000109 Stab2Q8R4U0 2559 aa3.41□□□□□ -1.86
Cntn1-201ENSMUST00000000109 Csmd3Q80T79 3707 aa3.39□□□□□ -1.87
Cntn1-201ENSMUST00000000109 Krtap13O88375 197 aa3.39□□□□□ -1.87
Cntn1-201ENSMUST00000000109 Gm5965D3Z724 196 aa3.39□□□□□ -1.87
Cntn1-201ENSMUST00000000109 FcgbpE9Q0B5 2583 aa3.38□□□□□ -1.87
Cntn1-201ENSMUST00000000109 Krtap14O08640 167 aa3.37□□□□□ -1.87
Cntn1-201ENSMUST00000000109 Cox6b2Q80ZN9 88 aa3.37□□□□□ -1.87
Cntn1-201ENSMUST00000000109 Gm19426M0QWC7 77 aa3.34□□□□□ -1.88
Cntn1-201ENSMUST00000000109 BC029722A0A0N4SW31 51 aa3.33□□□□□ -1.88
Cntn1-201ENSMUST00000000109 Muc6Q80T03 2850 aa3.33□□□□□ -1.88
Cntn1-201ENSMUST00000000109 2310050C09RikG5E8Z3 280 aa3.3□□□□□ -1.88
Cntn1-201ENSMUST00000000109 2210017I01RikA0A0A6YVV1 95 aa3.29□□□□□ -1.88
Cntn1-201ENSMUST00000000109 Gm9507D3Z5T3 223 aa3.29□□□□□ -1.88
Cntn1-201ENSMUST00000000109 D6Ertd527eA0A0N4SWI3 464 aa3.29□□□□□ -1.88
Cntn1-201ENSMUST00000000109 Krtap29-1A2A5X4 342 aa3.29□□□□□ -1.88
Cntn1-201ENSMUST00000000109 Tenm2Q9WTS5 2764 aa3.27□□□□□ -1.89
Cntn1-201ENSMUST00000000109 Gm20537G3UYK7 97 aa3.26□□□□□ -1.89
Cntn1-201ENSMUST00000000109 Krtap10-4Q08EG8 221 aa3.25□□□□□ -1.89
Cntn1-201ENSMUST00000000109 2310061N02RikQ9D6S9 174 aa3.25□□□□□ -1.89
Cntn1-201ENSMUST00000000109 Dnah10D3YYQ8 4591 aa3.25□□□□□ -1.89
Cntn1-201ENSMUST00000000109 Megf8P60882 2789 aa3.25□□□□□ -1.89
Cntn1-201ENSMUST00000000109 Gm17349F7BGH6 99 aa3.24□□□□□ -1.89
Cntn1-201ENSMUST00000000109 4933428G20RikQ9D3X4 101 aa3.24□□□□□ -1.89
Cntn1-201ENSMUST00000000109 Gm40193A0A1B0GT39 78 aa3.23□□□□□ -1.89
Cntn1-201ENSMUST00000000109 Fras1Q80T14 4010 aa3.21□□□□□ -1.9
Cntn1-201ENSMUST00000000109 2310079G19RikQ9D6L6 185 aa3.2□□□□□ -1.9
Cntn1-201ENSMUST00000000109 Gm5767A0A0J9YTU8 78 aa3.2□□□□□ -1.9
Cntn1-201ENSMUST00000000109 Tnp1P10856 55 aa3.19□□□□□ -1.9
Cntn1-201ENSMUST00000000109 Dnah7bL7N1Y0 4068 aa3.18□□□□□ -1.9
Cntn1-201ENSMUST00000000109 Krtap10-10A0A1W2P7T6 217 aa3.18□□□□□ -1.9
Cntn1-201ENSMUST00000000109 Dnah14A0A140LIJ4 4489 aa3.17□□□□□ -1.9
Cntn1-201ENSMUST00000000109 A930033H14RikG5E8X6 103 aa3.16□□□□□ -1.9
Cntn1-201ENSMUST00000000109 Gm2696A0A1W2P709 240 aa3.11□□□□□ -1.91
Cntn1-201ENSMUST00000000109 B930094E09RikQ8C4T2 136 aa3.1□□□□□ -1.91
Cntn1-201ENSMUST00000000109 Dnah6E9Q0B6 4144 aa3.1□□□□□ -1.91
Cntn1-201ENSMUST00000000109 Dnah3Q8BW94 4083 aa3.09□□□□□ -1.91
Cntn1-201ENSMUST00000000109 Gm17416Q30KP4 66 aa3.09□□□□□ -1.91
Cntn1-201ENSMUST00000000109 Rps29P62274 56 aa3.07□□□□□ -1.92
Cntn1-201ENSMUST00000000109 Kmt2aP55200 3966 aa3.06□□□□□ -1.92
Cntn1-201ENSMUST00000000109 A0A286YCP9 139 aa3.06□□□□□ -1.92
Cntn1-201ENSMUST00000000109 PrkdcP97313 4128 aa3.04□□□□□ -1.92
Cntn1-201ENSMUST00000000109 Dnah5Q8VHE6 4621 aa3.02□□□□□ -1.93
Cntn1-201ENSMUST00000000109 Huwe1Q7TMY8 4377 aaKnown RBP3.02□□□□□ -1.93
Cntn1-201ENSMUST00000000109 Stard9Q80TF6 4561 aa3.01□□□□□ -1.93
Cntn1-201ENSMUST00000000109 Gm9918Q8BUR5 174 aa2.98□□□□□ -1.93
Cntn1-201ENSMUST00000000109 Krtap3-2Q9D638 99 aa2.96□□□□□ -1.94
Cntn1-201ENSMUST00000000109 Krtap3-3Q9D7P0 99 aa2.96□□□□□ -1.94
Cntn1-201ENSMUST00000000109 Dnah11E9Q7N9 4488 aa2.95□□□□□ -1.94
Cntn1-201ENSMUST00000000109 Dnah7cA0A087WR13 4024 aa2.95□□□□□ -1.94
Cntn1-201ENSMUST00000000109 Dnah7aE9Q0T8 4024 aa2.95□□□□□ -1.94
Retrieved 100 of 22,080 RNA–protein pairs in 82.4 ms