RNA–Protein interactions for RNA: ENSMUST00000171158.7

Sdc1-205, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 2,311 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-205ENSMUST00000171158 Mrpl34Q99N91 92 aa9.94□□□□□ -0.82
Sdc1-205ENSMUST00000171158 Igsf10Q3V1M1 2594 aa9.93□□□□□ -0.82
Sdc1-205ENSMUST00000171158 Igkv3-4A0A140T8Q4 119 aa9.92□□□□□ -0.82
Sdc1-205ENSMUST00000171158 Prr15lQ8JZM2 100 aa9.91□□□□□ -0.82
Sdc1-205ENSMUST00000171158 Gm37013Q8K491 104 aa9.91□□□□□ -0.82
Sdc1-205ENSMUST00000171158 Gm44790A0A0N4SV91 103 aa9.9□□□□□ -0.82
Sdc1-205ENSMUST00000171158 Gm17521F6QAC8 156 aa9.9□□□□□ -0.82
Sdc1-205ENSMUST00000171158 Defb40Q70KL2 73 aa9.9□□□□□ -0.82
Sdc1-205ENSMUST00000171158 Gm12353A2AGJ4 60 aa9.89□□□□□ -0.83
Sdc1-205ENSMUST00000171158 Samd13D3YUG0 102 aa9.88□□□□□ -0.83
Sdc1-205ENSMUST00000171158 Gm9508A0A1W2P7W0 230 aa9.88□□□□□ -0.83
Sdc1-205ENSMUST00000171158 B9d2Q3UK10 175 aa9.88□□□□□ -0.83
Sdc1-205ENSMUST00000171158 SycnQ8VCK7 134 aa9.88□□□□□ -0.83
Sdc1-205ENSMUST00000171158 Zcchc13Q9D548 170 aa9.88□□□□□ -0.83
Sdc1-205ENSMUST00000171158 1700018G05RikA0A1B0GSI2 66 aa9.87□□□□□ -0.83
Sdc1-205ENSMUST00000171158 TgO08710 2766 aa9.86□□□□□ -0.83
Sdc1-205ENSMUST00000171158 Q8BT88 171 aa9.86□□□□□ -0.83
Sdc1-205ENSMUST00000171158 Defa28D3Z1V9 94 aa9.85□□□□□ -0.83
Sdc1-205ENSMUST00000171158 Csmd3Q80T79 3707 aa9.85□□□□□ -0.83
Sdc1-205ENSMUST00000171158 Igkv8-19A0A0G2JFN8 121 aa9.84□□□□□ -0.83
Sdc1-205ENSMUST00000171158 SnurfQ9WU12 71 aa9.84□□□□□ -0.83
Sdc1-205ENSMUST00000171158 Gm10837Q3UTT8 145 aa9.84□□□□□ -0.83
Sdc1-205ENSMUST00000171158 Dync2h1Q45VK7 4306 aa9.84□□□□□ -0.83
Sdc1-205ENSMUST00000171158 Defa27F2Z403 93 aa9.83□□□□□ -0.84
Sdc1-205ENSMUST00000171158 Gm10139O88245 57 aa9.83□□□□□ -0.84
Sdc1-205ENSMUST00000171158 UqcrqQ9CQ69 82 aa9.82□□□□□ -0.84
Sdc1-205ENSMUST00000171158 Odf3bQ5M8M2 238 aa9.81□□□□□ -0.84
Sdc1-205ENSMUST00000171158 Brk1Q91VR8 75 aa9.8□□□□□ -0.84
Sdc1-205ENSMUST00000171158 Spink8Q09TK9 105 aa9.79□□□□□ -0.84
Sdc1-205ENSMUST00000171158 Wfdc13Q5DQQ6 81 aa9.79□□□□□ -0.84
Sdc1-205ENSMUST00000171158 Gm21886J3QJU9 214 aa9.78□□□□□ -0.84
Sdc1-205ENSMUST00000171158 Huwe1Q7TMY8 4377 aaKnown RBP9.78□□□□□ -0.84
Sdc1-205ENSMUST00000171158 TnxbO35452 4006 aa9.78□□□□□ -0.84
Sdc1-205ENSMUST00000171158 FcgbpE9Q0B5 2583 aa9.78□□□□□ -0.84
Sdc1-205ENSMUST00000171158 Phf5aP83870 110 aaKnown RBP9.78□□□□□ -0.84
Sdc1-205ENSMUST00000171158 Serp1Q9Z1W5 66 aa9.77□□□□□ -0.85
Sdc1-205ENSMUST00000171158 Igkv3-10A0A0G2JGN0 119 aa9.77□□□□□ -0.85
Sdc1-205ENSMUST00000171158 Gm17349F7BGH6 99 aa9.77□□□□□ -0.85
Sdc1-205ENSMUST00000171158 Pet100P0DJE0 76 aa9.76□□□□□ -0.85
Sdc1-205ENSMUST00000171158 Wfdc10Q3V2J9 124 aa9.75□□□□□ -0.85
Sdc1-205ENSMUST00000171158 Gm10570F6VB42 170 aa9.74□□□□□ -0.85
Sdc1-205ENSMUST00000171158 Chchd10Q7TNL9 138 aa9.74□□□□□ -0.85
Sdc1-205ENSMUST00000171158 AI606181Q8C7B9 129 aa9.74□□□□□ -0.85
Sdc1-205ENSMUST00000171158 Gm28230A0A0A0MQ91 144 aa9.73□□□□□ -0.85
Sdc1-205ENSMUST00000171158 Dnah11E9Q7N9 4488 aa9.72□□□□□ -0.85
Sdc1-205ENSMUST00000171158 Megf8P60882 2789 aa9.72□□□□□ -0.85
Sdc1-205ENSMUST00000171158 Nupr2Q497P3 102 aa9.72□□□□□ -0.85
Sdc1-205ENSMUST00000171158 Ube2aQ9Z255 152 aa9.72□□□□□ -0.85
Sdc1-205ENSMUST00000171158 H2al1aQ5M8Q2 105 aa9.71□□□□□ -0.85
Sdc1-205ENSMUST00000171158 HrnrQ8VHD8 2496 aa9.7□□□□□ -0.86
Sdc1-205ENSMUST00000171158 Dnah9B1AR51 4484 aa9.7□□□□□ -0.86
Sdc1-205ENSMUST00000171158 Gm4707V9GXN5 68 aa9.7□□□□□ -0.86
Sdc1-205ENSMUST00000171158 Stab2Q8R4U0 2559 aa9.69□□□□□ -0.86
Sdc1-205ENSMUST00000171158 Reg3aO09037 175 aa9.69□□□□□ -0.86
Sdc1-205ENSMUST00000171158 Coa6Q8BGD8 79 aa9.69□□□□□ -0.86
Sdc1-205ENSMUST00000171158 Defb9Q8R2I6 67 aa9.68□□□□□ -0.86
Sdc1-205ENSMUST00000171158 1700012A03RikQ9DAF1 130 aa9.68□□□□□ -0.86
Sdc1-205ENSMUST00000171158 Tenm2Q9WTS5 2764 aa9.68□□□□□ -0.86
Sdc1-205ENSMUST00000171158 Igkv3-7A0A0G2JE31 119 aa9.68□□□□□ -0.86
Sdc1-205ENSMUST00000171158 6030445D17RikE9Q8F9 148 aa9.65□□□□□ -0.86
Sdc1-205ENSMUST00000171158 Spint4Q9D263 159 aa9.65□□□□□ -0.86
Sdc1-205ENSMUST00000171158 Muc6Q80T03 2850 aa9.65□□□□□ -0.87
Sdc1-205ENSMUST00000171158 Krtap10-10A0A1W2P7T6 217 aa9.64□□□□□ -0.87
Sdc1-205ENSMUST00000171158 Gm27235Q3UW50 83 aa9.62□□□□□ -0.87
Sdc1-205ENSMUST00000171158 A0A286YE49 62 aa9.62□□□□□ -0.87
Sdc1-205ENSMUST00000171158 Plac8Q9JI48 112 aa9.62□□□□□ -0.87
Sdc1-205ENSMUST00000171158 Fras1Q80T14 4010 aa9.62□□□□□ -0.87
Sdc1-205ENSMUST00000171158 Gm10065F6TJM2 114 aa9.61□□□□□ -0.87
Sdc1-205ENSMUST00000171158 Rpl37aP61514 92 aa9.61□□□□□ -0.87
Sdc1-205ENSMUST00000171158 Igkv3-5A0A140T8M6 119 aa9.6□□□□□ -0.87
Sdc1-205ENSMUST00000171158 Gm20604F8WIA3 75 aa9.6□□□□□ -0.87
Sdc1-205ENSMUST00000171158 Q8K1L6 76 aa9.6□□□□□ -0.87
Sdc1-205ENSMUST00000171158 A530084C06RikQ3UTW2 186 aa9.6□□□□□ -0.87
Sdc1-205ENSMUST00000171158 Dph3Q8K0W9 82 aa9.59□□□□□ -0.87
Sdc1-205ENSMUST00000171158 FasnP19096 2504 aaKnown RBP9.58□□□□□ -0.88
Sdc1-205ENSMUST00000171158 Atox1O08997 68 aaKnown RBP9.57□□□□□ -0.88
Sdc1-205ENSMUST00000171158 Krtap29-1A2A5X4 342 aa9.57□□□□□ -0.88
Sdc1-205ENSMUST00000171158 Gm2310J3QNJ2 377 aa9.56□□□□□ -0.88
Sdc1-205ENSMUST00000171158 PrkdcP97313 4128 aa9.56□□□□□ -0.88
Sdc1-205ENSMUST00000171158 Gm10642Q3TWM1 71 aa9.56□□□□□ -0.88
Sdc1-205ENSMUST00000171158 Defb12Q8K4N3 78 aa9.55□□□□□ -0.88
Sdc1-205ENSMUST00000171158 PlecQ9QXS1 4691 aaKnown RBP9.54□□□□□ -0.88
Sdc1-205ENSMUST00000171158 Gm9507D3Z5T3 223 aa9.54□□□□□ -0.88
Sdc1-205ENSMUST00000171158 1700074P13RikQ9D9G7 251 aa9.54□□□□□ -0.88
Sdc1-205ENSMUST00000171158 Cdc42se1Q8BHL7 80 aa9.53□□□□□ -0.88
Sdc1-205ENSMUST00000171158 Coa5Q99M07 74 aa9.53□□□□□ -0.88
Sdc1-205ENSMUST00000171158 Gm9918Q8BUR5 174 aa9.5□□□□□ -0.89
Sdc1-205ENSMUST00000171158 Sec61gP60060 68 aa9.49□□□□□ -0.89
Sdc1-205ENSMUST00000171158 Gm10337F7DEP7 55 aa9.47□□□□□ -0.89
Sdc1-205ENSMUST00000171158 Pkd1l1Q8R526 2615 aa9.46□□□□□ -0.9
Sdc1-205ENSMUST00000171158 NbdyA0A0N4SUI7 68 aa9.44□□□□□ -0.9
Sdc1-205ENSMUST00000171158 Gm10197F6QEY5 67 aa9.44□□□□□ -0.9
Sdc1-205ENSMUST00000171158 Adm2Q7TNK8 150 aa9.43□□□□□ -0.9
Sdc1-205ENSMUST00000171158 Ccdc179J3QM76 67 aa9.42□□□□□ -0.9
Sdc1-205ENSMUST00000171158 Cypt14J3QPF7 87 aa9.41□□□□□ -0.9
Sdc1-205ENSMUST00000171158 Mrpl55Q9CZ83 127 aa9.4□□□□□ -0.9
Sdc1-205ENSMUST00000171158 Znf706Q9D115 76 aaKnown RBP9.4□□□□□ -0.9
Sdc1-205ENSMUST00000171158 Gm28374F6SG70 93 aa9.38□□□□□ -0.91
Sdc1-205ENSMUST00000171158 Gm10267M0QWD8 85 aa9.38□□□□□ -0.91
Sdc1-205ENSMUST00000171158 Chtf8P0CG14 533 aa9.38□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 40.7 ms