RNA–Protein interactions for RNA: ENSMUST00000135636.5

Sort1-203, Transcript of Sortilin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Sort1, Length 6,836 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sort1-203ENSMUST00000135636 PolqQ8CGS6 2544 aa11.21□□□□□ -0.62
Sort1-203ENSMUST00000135636 Prr13Q9CQJ5 137 aa11.2□□□□□ -0.62
Sort1-203ENSMUST00000135636 AtrQ9JKK8 2635 aa11.2□□□□□ -0.62
Sort1-203ENSMUST00000135636 Cdh23Q99PF4 3354 aa11.18□□□□□ -0.62
Sort1-203ENSMUST00000135636 Rps28P62858 69 aaKnown RBP11.16□□□□□ -0.62
Sort1-203ENSMUST00000135636 Tnp2P11378 117 aa11.15□□□□□ -0.62
Sort1-203ENSMUST00000135636 2310050C09RikG5E8Z3 280 aa11.14□□□□□ -0.63
Sort1-203ENSMUST00000135636 Gm2696A0A1W2P709 240 aa11.14□□□□□ -0.63
Sort1-203ENSMUST00000135636 Rev3lQ61493 3122 aa11.13□□□□□ -0.63
Sort1-203ENSMUST00000135636 Gm9195A0A140LHT4 2805 aa11.12□□□□□ -0.63
Sort1-203ENSMUST00000135636 HttP42859 3119 aa11.11□□□□□ -0.63
Sort1-203ENSMUST00000135636 Zfhx3Q61329 3726 aa11.11□□□□□ -0.63
Sort1-203ENSMUST00000135636 Gm10139O88245 57 aa11.1□□□□□ -0.63
Sort1-203ENSMUST00000135636 Ankrd11E9Q4F7 2643 aa11.1□□□□□ -0.63
Sort1-203ENSMUST00000135636 PcntP48725 2898 aa11.08□□□□□ -0.64
Sort1-203ENSMUST00000135636 Nbeal1E9PYP2 2688 aa11.06□□□□□ -0.64
Sort1-203ENSMUST00000135636 Krtap29-1A2A5X4 342 aa11.06□□□□□ -0.64
Sort1-203ENSMUST00000135636 FlnaQ8BTM8 2647 aaKnown RBP11.01□□□□□ -0.65
Sort1-203ENSMUST00000135636 Sprr1aQ62266 144 aa11□□□□□ -0.65
Sort1-203ENSMUST00000135636 Gm11565A2A4M7 156 aa10.99□□□□□ -0.65
Sort1-203ENSMUST00000135636 FlnbQ80X90 2602 aaKnown RBP10.99□□□□□ -0.65
Sort1-203ENSMUST00000135636 Mki67E9PVX6 3177 aaKnown RBP10.98□□□□□ -0.65
Sort1-203ENSMUST00000135636 Ranbp2Q9ERU9 3053 aaKnown RBP10.96□□□□□ -0.66
Sort1-203ENSMUST00000135636 Gm7173A0A0G2JEB6 3132 aa10.94□□□□□ -0.66
Sort1-203ENSMUST00000135636 2310057N15RikQ9D6T8 200 aa10.92□□□□□ -0.66
Sort1-203ENSMUST00000135636 Gm37013Q8K491 104 aa10.91□□□□□ -0.66
Sort1-203ENSMUST00000135636 Lama2Q60675 3118 aaKnown RBP10.88□□□□□ -0.67
Sort1-203ENSMUST00000135636 HrnrQ8VHD8 2496 aa10.85□□□□□ -0.67
Sort1-203ENSMUST00000135636 Szt2A2A9C3 3431 aa10.84□□□□□ -0.67
Sort1-203ENSMUST00000135636 Akap13E9Q394 2776 aa10.83□□□□□ -0.68
Sort1-203ENSMUST00000135636 Unc80Q8BLN6 3261 aa10.83□□□□□ -0.68
Sort1-203ENSMUST00000135636 BC029722A0A0N4SW31 51 aa10.83□□□□□ -0.68
Sort1-203ENSMUST00000135636 Hectd1Q69ZR2 2618 aaKnown RBP10.82□□□□□ -0.68
Sort1-203ENSMUST00000135636 Gm10643Q3URG9 111 aa10.81□□□□□ -0.68
Sort1-203ENSMUST00000135636 Gm16253D3Z167 63 aa10.81□□□□□ -0.68
Sort1-203ENSMUST00000135636 FasnP19096 2504 aaKnown RBP10.8□□□□□ -0.68
Sort1-203ENSMUST00000135636 Fn1P11276 2477 aaKnown RBP10.79□□□□□ -0.68
Sort1-203ENSMUST00000135636 BptfA2A654 3036 aaKnown RBP10.79□□□□□ -0.68
Sort1-203ENSMUST00000135636 MgaA2AWL7 3003 aaKnown RBP10.79□□□□□ -0.68
Sort1-203ENSMUST00000135636 Myo18bE9PV66 2605 aa10.77□□□□□ -0.69
Sort1-203ENSMUST00000135636 Celsr3Q91ZI0 3301 aa10.77□□□□□ -0.69
Sort1-203ENSMUST00000135636 Krtap14O08640 167 aa10.76□□□□□ -0.69
Sort1-203ENSMUST00000135636 Ash1lQ99MY8 2958 aa10.69□□□□□ -0.7
Sort1-203ENSMUST00000135636 AtmQ62388 3066 aa10.64□□□□□ -0.71
Sort1-203ENSMUST00000135636 Gcn1E9PVA8 2671 aaKnown RBP10.63□□□□□ -0.71
Sort1-203ENSMUST00000135636 Rpl37Q9D823 97 aa10.59□□□□□ -0.71
Sort1-203ENSMUST00000135636 Dmxl1Q6PNC0 3013 aa10.59□□□□□ -0.71
Sort1-203ENSMUST00000135636 Gm5965D3Z724 196 aa10.57□□□□□ -0.72
Sort1-203ENSMUST00000135636 Cystm1Q8K353 104 aa10.56□□□□□ -0.72
Sort1-203ENSMUST00000135636 Stab1Q8R4Y4 2571 aa10.56□□□□□ -0.72
Sort1-203ENSMUST00000135636 Cfap54Q8C6S9 3106 aa10.55□□□□□ -0.72
Sort1-203ENSMUST00000135636 Romo1P60603 79 aa10.55□□□□□ -0.72
Sort1-203ENSMUST00000135636 Vps13aQ5H8C4 3166 aa10.55□□□□□ -0.72
Sort1-203ENSMUST00000135636 2310061N02RikQ9D6S9 174 aa10.55□□□□□ -0.72
Sort1-203ENSMUST00000135636 Igsf10Q3V1M1 2594 aa10.53□□□□□ -0.72
Sort1-203ENSMUST00000135636 Prrc2cQ3TLH4 2846 aaKnown RBP10.52□□□□□ -0.73
Sort1-203ENSMUST00000135636 Itpr3P70227 2670 aa10.49□□□□□ -0.73
Sort1-203ENSMUST00000135636 Gm10382Q3V0T5 144 aa10.49□□□□□ -0.73
Sort1-203ENSMUST00000135636 Notch1Q01705 2531 aa10.48□□□□□ -0.73
Sort1-203ENSMUST00000135636 Col6a3E9PWQ3 3284 aa10.48□□□□□ -0.73
Sort1-203ENSMUST00000135636 Chd7A2AJK6 2986 aaKnown RBP10.47□□□□□ -0.73
Sort1-203ENSMUST00000135636 A730071L15RikQ8C4X0 137 aa10.47□□□□□ -0.73
Sort1-203ENSMUST00000135636 NipblQ6KCD5 2798 aaKnown RBP10.47□□□□□ -0.73
Sort1-203ENSMUST00000135636 Brca2P97929 3329 aa10.45□□□□□ -0.74
Sort1-203ENSMUST00000135636 Frem2Q6NVD0 3160 aa10.43□□□□□ -0.74
Sort1-203ENSMUST00000135636 Mast4Q811L6 2618 aa10.4□□□□□ -0.74
Sort1-203ENSMUST00000135636 Celsr1O35161 3034 aa10.36□□□□□ -0.75
Sort1-203ENSMUST00000135636 Gm2310J3QNJ2 377 aa10.35□□□□□ -0.75
Sort1-203ENSMUST00000135636 Nbeal2Q6ZQA0 2742 aa10.34□□□□□ -0.75
Sort1-203ENSMUST00000135636 Myo15aQ9QZZ4 3511 aa10.32□□□□□ -0.76
Sort1-203ENSMUST00000135636 Fbn2Q61555 2907 aa10.29□□□□□ -0.76
Sort1-203ENSMUST00000135636 Gm21887J3QQ04 176 aa10.29□□□□□ -0.76
Sort1-203ENSMUST00000135636 KalrnA2CG49 2964 aa10.28□□□□□ -0.76
Sort1-203ENSMUST00000135636 Gm3646F6S692 53 aa10.25□□□□□ -0.77
Sort1-203ENSMUST00000135636 A930033H14RikG5E8X6 103 aa10.25□□□□□ -0.77
Sort1-203ENSMUST00000135636 Map1aQ9QYR6 2776 aa10.24□□□□□ -0.77
Sort1-203ENSMUST00000135636 AspmQ8CJ27 3122 aa10.21□□□□□ -0.78
Sort1-203ENSMUST00000135636 9530053A07RikE9PVG8 2581 aa10.21□□□□□ -0.78
Sort1-203ENSMUST00000135636 Lrrc37aB1AWG4 3215 aa10.2□□□□□ -0.78
Sort1-203ENSMUST00000135636 Lama1P19137 3084 aa10.19□□□□□ -0.78
Sort1-203ENSMUST00000135636 Myo15bI7HPW8 3033 aa10.18□□□□□ -0.78
Sort1-203ENSMUST00000135636 FryE9Q8I9 3020 aa10.17□□□□□ -0.78
Sort1-203ENSMUST00000135636 Ubr5Q80TP3 2792 aa10.17□□□□□ -0.78
Sort1-203ENSMUST00000135636 Gm9918Q8BUR5 174 aa10.16□□□□□ -0.78
Sort1-203ENSMUST00000135636 Dchs1E9PVD3 3291 aa10.15□□□□□ -0.78
Sort1-203ENSMUST00000135636 VcanQ62059 3357 aa10.15□□□□□ -0.78
Sort1-203ENSMUST00000135636 Rps29P62274 56 aa10.14□□□□□ -0.79
Sort1-203ENSMUST00000135636 Chd6A3KFM7 2711 aa10.14□□□□□ -0.79
Sort1-203ENSMUST00000135636 D6Ertd527eA0A0N4SWI3 464 aa10.14□□□□□ -0.79
Sort1-203ENSMUST00000135636 Wdfy4E9Q2M9 3149 aa10.12□□□□□ -0.79
Sort1-203ENSMUST00000135636 Tep1P97499 2629 aa10.11□□□□□ -0.79
Sort1-203ENSMUST00000135636 Gm9736A0A1W2P7N1 277 aa10.1□□□□□ -0.79
Sort1-203ENSMUST00000135636 Itpr1P11881 2749 aa10.09□□□□□ -0.79
Sort1-203ENSMUST00000135636 Dchs2A0A0A6YW72 3346 aa10.09□□□□□ -0.79
Sort1-203ENSMUST00000135636 Vps13cQ8BX70 3748 aa10.07□□□□□ -0.8
Sort1-203ENSMUST00000135636 FrylF8VQ05 3007 aa10.04□□□□□ -0.8
Sort1-203ENSMUST00000135636 Gm10318A0A1W2P728 225 aa10.04□□□□□ -0.8
Sort1-203ENSMUST00000135636 SpegQ62407 3262 aa10.03□□□□□ -0.8
Sort1-203ENSMUST00000135636 Cox6b2Q80ZN9 88 aa10.02□□□□□ -0.81
Sort1-203ENSMUST00000135636 Adgrg4B7ZCC9 3073 aa10.01□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 49 ms