RNA–Protein interactions for RNA: ENSMUST00000130871.1

Gm28043-201, Transcript of E3 ubiquitin-protein ligase RNF8, mousemouse

APPRIS P1 TSL 2 BASIC

Gene Gm28043, Length 6,521 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043-201ENSMUST00000130871 Gm9955Q8CEJ8 102 aa7.99□□□□□ -1.13
Gm28043-201ENSMUST00000130871 Ubr5Q80TP3 2792 aa7.99□□□□□ -1.13
Gm28043-201ENSMUST00000130871 Gm3880A0A1B0GSB3 72 aa7.99□□□□□ -1.13
Gm28043-201ENSMUST00000130871 Gm11565A2A4M7 156 aa7.98□□□□□ -1.13
Gm28043-201ENSMUST00000130871 Tep1P97499 2629 aa7.97□□□□□ -1.13
Gm28043-201ENSMUST00000130871 Gm7137J3QMW1 236 aa7.96□□□□□ -1.13
Gm28043-201ENSMUST00000130871 9530053A07RikE9PVG8 2581 aa7.96□□□□□ -1.14
Gm28043-201ENSMUST00000130871 Jbts17Q8CE72 3214 aa7.95□□□□□ -1.14
Gm28043-201ENSMUST00000130871 Igsf10Q3V1M1 2594 aa7.95□□□□□ -1.14
Gm28043-201ENSMUST00000130871 Cep350E9Q309 3095 aa7.95□□□□□ -1.14
Gm28043-201ENSMUST00000130871 UtrnE9Q6R7 3430 aa7.94□□□□□ -1.14
Gm28043-201ENSMUST00000130871 Gm4491E0CX42 125 aa7.93□□□□□ -1.14
Gm28043-201ENSMUST00000130871 Map1aQ9QYR6 2776 aa7.92□□□□□ -1.14
Gm28043-201ENSMUST00000130871 Spink7Q6IE32 76 aa7.92□□□□□ -1.14
Gm28043-201ENSMUST00000130871 Gm10139O88245 57 aa7.89□□□□□ -1.15
Gm28043-201ENSMUST00000130871 Itpr3P70227 2670 aa7.89□□□□□ -1.15
Gm28043-201ENSMUST00000130871 Odf3bQ5M8M2 238 aa7.89□□□□□ -1.15
Gm28043-201ENSMUST00000130871 Cystm1Q8K353 104 aa7.89□□□□□ -1.15
Gm28043-201ENSMUST00000130871 Stab2Q8R4U0 2559 aa7.87□□□□□ -1.15
Gm28043-201ENSMUST00000130871 Pkd1l1Q8R526 2615 aa7.85□□□□□ -1.15
Gm28043-201ENSMUST00000130871 Sprr1aQ62266 144 aa7.85□□□□□ -1.15
Gm28043-201ENSMUST00000130871 Lama2Q60675 3118 aaKnown RBP7.83□□□□□ -1.16
Gm28043-201ENSMUST00000130871 A730071L15RikQ8C4X0 137 aa7.8□□□□□ -1.16
Gm28043-201ENSMUST00000130871 Lama3Q61789 3330 aa7.8□□□□□ -1.16
Gm28043-201ENSMUST00000130871 Gm16253D3Z167 63 aa7.79□□□□□ -1.16
Gm28043-201ENSMUST00000130871 Ash1lQ99MY8 2958 aa7.79□□□□□ -1.16
Gm28043-201ENSMUST00000130871 Gm9508A0A1W2P7W0 230 aa7.78□□□□□ -1.16
Gm28043-201ENSMUST00000130871 Krtap15-1Q9QZU5 150 aa7.78□□□□□ -1.16
Gm28043-201ENSMUST00000130871 Gm37013Q8K491 104 aa7.77□□□□□ -1.17
Gm28043-201ENSMUST00000130871 Nbeal2Q6ZQA0 2742 aa7.77□□□□□ -1.17
Gm28043-201ENSMUST00000130871 Col6a5A6H584 2640 aa7.76□□□□□ -1.17
Gm28043-201ENSMUST00000130871 Gm17349F7BGH6 99 aa7.73□□□□□ -1.17
Gm28043-201ENSMUST00000130871 Gm3646F6S692 53 aa7.71□□□□□ -1.17
Gm28043-201ENSMUST00000130871 Gm7173A0A0G2JEB6 3132 aa7.71□□□□□ -1.17
Gm28043-201ENSMUST00000130871 Myo15bI7HPW8 3033 aa7.7□□□□□ -1.18
Gm28043-201ENSMUST00000130871 Tnrc18Q80WC3 2878 aa7.7□□□□□ -1.18
Gm28043-201ENSMUST00000130871 Fbn2Q61555 2907 aa7.69□□□□□ -1.18
Gm28043-201ENSMUST00000130871 Fam229aB2KGE5 128 aa7.68□□□□□ -1.18
Gm28043-201ENSMUST00000130871 MgaA2AWL7 3003 aaKnown RBP7.67□□□□□ -1.18
Gm28043-201ENSMUST00000130871 Camk2n1Q6QWF9 78 aa7.67□□□□□ -1.18
Gm28043-201ENSMUST00000130871 Dmxl1Q6PNC0 3013 aa7.66□□□□□ -1.18
Gm28043-201ENSMUST00000130871 Bod1lE9Q6J5 3032 aa7.65□□□□□ -1.18
Gm28043-201ENSMUST00000130871 Gm36176A0A1W2P8D5 158 aa7.65□□□□□ -1.19
Gm28043-201ENSMUST00000130871 Mki67E9PVX6 3177 aaKnown RBP7.64□□□□□ -1.19
Gm28043-201ENSMUST00000130871 Tex15F8VPN2 2785 aa7.64□□□□□ -1.19
Gm28043-201ENSMUST00000130871 Rpl37Q9D823 97 aa7.62□□□□□ -1.19
Gm28043-201ENSMUST00000130871 Sec61bQ9CQS8 96 aaKnown RBP7.59□□□□□ -1.19
Gm28043-201ENSMUST00000130871 Chd7A2AJK6 2986 aaKnown RBP7.59□□□□□ -1.19
Gm28043-201ENSMUST00000130871 Krtap29-1A2A5X4 342 aa7.59□□□□□ -1.2
Gm28043-201ENSMUST00000130871 Muc2Q80Z19 2680 aa7.58□□□□□ -1.2
Gm28043-201ENSMUST00000130871 Hivep1Q03172 2688 aa7.57□□□□□ -1.2
Gm28043-201ENSMUST00000130871 Gm5767A0A0J9YTU8 78 aa7.56□□□□□ -1.2
Gm28043-201ENSMUST00000130871 Romo1P60603 79 aa7.55□□□□□ -1.2
Gm28043-201ENSMUST00000130871 Col12a1Q60847 3120 aa7.53□□□□□ -1.2
Gm28043-201ENSMUST00000130871 KalrnA2CG49 2964 aa7.53□□□□□ -1.2
Gm28043-201ENSMUST00000130871 BC029722A0A0N4SW31 51 aa7.52□□□□□ -1.21
Gm28043-201ENSMUST00000130871 HttP42859 3119 aa7.51□□□□□ -1.21
Gm28043-201ENSMUST00000130871 2310050C09RikG5E8Z3 280 aa7.51□□□□□ -1.21
Gm28043-201ENSMUST00000130871 FcgbpE9Q0B5 2583 aa7.51□□□□□ -1.21
Gm28043-201ENSMUST00000130871 Krtap13O88375 197 aa7.5□□□□□ -1.21
Gm28043-201ENSMUST00000130871 4933415A04RikQ9D443 101 aa7.49□□□□□ -1.21
Gm28043-201ENSMUST00000130871 1700042G07RikB1AUF7 90 aa7.48□□□□□ -1.21
Gm28043-201ENSMUST00000130871 Gm10382Q3V0T5 144 aa7.47□□□□□ -1.21
Gm28043-201ENSMUST00000130871 Rev3lQ61493 3122 aa7.47□□□□□ -1.21
Gm28043-201ENSMUST00000130871 Gm19426M0QWC7 77 aa7.45□□□□□ -1.22
Gm28043-201ENSMUST00000130871 Ranbp2Q9ERU9 3053 aaKnown RBP7.43□□□□□ -1.22
Gm28043-201ENSMUST00000130871 Cfap54Q8C6S9 3106 aa7.42□□□□□ -1.22
Gm28043-201ENSMUST00000130871 AtmQ62388 3066 aa7.39□□□□□ -1.23
Gm28043-201ENSMUST00000130871 Gm2310J3QNJ2 377 aa7.39□□□□□ -1.23
Gm28043-201ENSMUST00000130871 Frem2Q6NVD0 3160 aa7.38□□□□□ -1.23
Gm28043-201ENSMUST00000130871 Krtap14O08640 167 aa7.38□□□□□ -1.23
Gm28043-201ENSMUST00000130871 Gm9507D3Z5T3 223 aa7.36□□□□□ -1.23
Gm28043-201ENSMUST00000130871 Vps13aQ5H8C4 3166 aa7.36□□□□□ -1.23
Gm28043-201ENSMUST00000130871 Itpr2Q9Z329 2701 aa7.35□□□□□ -1.23
Gm28043-201ENSMUST00000130871 Celsr1O35161 3034 aa7.35□□□□□ -1.23
Gm28043-201ENSMUST00000130871 SmcpP15265 143 aa7.34□□□□□ -1.23
Gm28043-201ENSMUST00000130871 2310061N02RikQ9D6S9 174 aa7.34□□□□□ -1.23
Gm28043-201ENSMUST00000130871 Usp34Q6ZQ93 3582 aa7.34□□□□□ -1.23
Gm28043-201ENSMUST00000130871 AspmQ8CJ27 3122 aa7.34□□□□□ -1.23
Gm28043-201ENSMUST00000130871 Utp20Q5XG71 2788 aaKnown RBP7.31□□□□□ -1.24
Gm28043-201ENSMUST00000130871 Cox6b2Q80ZN9 88 aa7.3□□□□□ -1.24
Gm28043-201ENSMUST00000130871 TgO08710 2766 aa7.3□□□□□ -1.24
Gm28043-201ENSMUST00000130871 Rps29P62274 56 aa7.29□□□□□ -1.24
Gm28043-201ENSMUST00000130871 Srrm2Q8BTI8 2703 aaKnown RBP7.28□□□□□ -1.24
Gm28043-201ENSMUST00000130871 Krtap10-4Q08EG8 221 aa7.28□□□□□ -1.24
Gm28043-201ENSMUST00000130871 Tnp2P11378 117 aa7.24□□□□□ -1.25
Gm28043-201ENSMUST00000130871 Unc80Q8BLN6 3261 aa7.23□□□□□ -1.25
Gm28043-201ENSMUST00000130871 Igfn1Q3KNY0 2849 aa7.21□□□□□ -1.25
Gm28043-201ENSMUST00000130871 ApcQ61315 2845 aa7.21□□□□□ -1.26
Gm28043-201ENSMUST00000130871 FlncQ8VHX6 2726 aaKnown RBP7.19□□□□□ -1.26
Gm28043-201ENSMUST00000130871 Krtap10-10A0A1W2P7T6 217 aa7.18□□□□□ -1.26
Gm28043-201ENSMUST00000130871 Cdh23Q99PF4 3354 aa7.17□□□□□ -1.26
Gm28043-201ENSMUST00000130871 BptfA2A654 3036 aaKnown RBP7.17□□□□□ -1.26
Gm28043-201ENSMUST00000130871 FryE9Q8I9 3020 aa7.15□□□□□ -1.26
Gm28043-201ENSMUST00000130871 D6Ertd527eA0A0N4SWI3 464 aa7.15□□□□□ -1.26
Gm28043-201ENSMUST00000130871 FrylF8VQ05 3007 aa7.14□□□□□ -1.27
Gm28043-201ENSMUST00000130871 Zzef1Q5SSH7 2924 aa7.11□□□□□ -1.27
Gm28043-201ENSMUST00000130871 Celsr2Q9R0M0 2920 aa7.09□□□□□ -1.27
Gm28043-201ENSMUST00000130871 Wdfy4E9Q2M9 3149 aa7.07□□□□□ -1.28
Gm28043-201ENSMUST00000130871 DspE9Q557 2883 aaKnown RBP7.07□□□□□ -1.28
Retrieved 100 of 22,080 RNA–protein pairs in 153.7 ms