RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Srrm2Q8BTI8 2703 aaKnown RBP8.24□□□□□ -1.09
Nup88-203ENSMUST00000108531 Gm10337F7DEP7 55 aa8.24□□□□□ -1.09
Nup88-203ENSMUST00000108531 Coa6Q8BGD8 79 aa8.23□□□□□ -1.09
Nup88-203ENSMUST00000108531 1700018G05RikA0A1B0GSI2 66 aa8.23□□□□□ -1.09
Nup88-203ENSMUST00000108531 Fam104aA2A6P4 185 aa8.22□□□□□ -1.09
Nup88-203ENSMUST00000108531 Gm36176A0A1W2P8D5 158 aa8.21□□□□□ -1.09
Nup88-203ENSMUST00000108531 Defa28D3Z1V9 94 aa8.21□□□□□ -1.09
Nup88-203ENSMUST00000108531 Col6a5A6H584 2640 aa8.21□□□□□ -1.1
Nup88-203ENSMUST00000108531 Mrpl55Q9CZ83 127 aa8.21□□□□□ -1.1
Nup88-203ENSMUST00000108531 Hivep1Q03172 2688 aa8.19□□□□□ -1.1
Nup88-203ENSMUST00000108531 FlnbQ80X90 2602 aaKnown RBP8.19□□□□□ -1.1
Nup88-203ENSMUST00000108531 B9d2Q3UK10 175 aa8.19□□□□□ -1.1
Nup88-203ENSMUST00000108531 Spint4Q9D263 159 aa8.19□□□□□ -1.1
Nup88-203ENSMUST00000108531 Gm21886J3QJU9 214 aa8.18□□□□□ -1.1
Nup88-203ENSMUST00000108531 Igkv3-10A0A0G2JGN0 119 aa8.17□□□□□ -1.1
Nup88-203ENSMUST00000108531 Dnah17Q69Z23 4481 aa8.17□□□□□ -1.1
Nup88-203ENSMUST00000108531 Gm7137J3QMW1 236 aa8.16□□□□□ -1.1
Nup88-203ENSMUST00000108531 Fn1P11276 2477 aaKnown RBP8.16□□□□□ -1.1
Nup88-203ENSMUST00000108531 Cdc42se1Q8BHL7 80 aa8.15□□□□□ -1.1
Nup88-203ENSMUST00000108531 Dnah1E9Q8T7 4250 aa8.15□□□□□ -1.11
Nup88-203ENSMUST00000108531 H2al1bA0A087WP11 105 aa8.14□□□□□ -1.11
Nup88-203ENSMUST00000108531 H2al1kJ3QP08 105 aa8.14□□□□□ -1.11
Nup88-203ENSMUST00000108531 H2al1eQ810S6 105 aa8.14□□□□□ -1.11
Nup88-203ENSMUST00000108531 H2al1mQ9DAD9 105 aa8.14□□□□□ -1.11
Nup88-203ENSMUST00000108531 Odf3bQ5M8M2 238 aa8.14□□□□□ -1.11
Nup88-203ENSMUST00000108531 Gm10139O88245 57 aa8.13□□□□□ -1.11
Nup88-203ENSMUST00000108531 SycnQ8VCK7 134 aa8.13□□□□□ -1.11
Nup88-203ENSMUST00000108531 Atox1O08997 68 aaKnown RBP8.13□□□□□ -1.11
Nup88-203ENSMUST00000108531 Wfdc13Q5DQQ6 81 aa8.13□□□□□ -1.11
Nup88-203ENSMUST00000108531 Wfdc17Q5SSJ1 76 aa8.13□□□□□ -1.11
Nup88-203ENSMUST00000108531 Chchd10Q7TNL9 138 aa8.13□□□□□ -1.11
Nup88-203ENSMUST00000108531 Nsd1O88491 2588 aaKnown RBP8.12□□□□□ -1.11
Nup88-203ENSMUST00000108531 Reg3aO09037 175 aa8.12□□□□□ -1.11
Nup88-203ENSMUST00000108531 Zcchc13Q9D548 170 aa8.12□□□□□ -1.11
Nup88-203ENSMUST00000108531 Gm28230A0A0A0MQ91 144 aa8.12□□□□□ -1.11
Nup88-203ENSMUST00000108531 Dnah14A0A140LIJ4 4489 aa8.11□□□□□ -1.11
Nup88-203ENSMUST00000108531 A0A286YE49 62 aa8.11□□□□□ -1.11
Nup88-203ENSMUST00000108531 Defb12Q8K4N3 78 aa8.11□□□□□ -1.11
Nup88-203ENSMUST00000108531 Coa5Q99M07 74 aa8.1□□□□□ -1.11
Nup88-203ENSMUST00000108531 TgO08710 2766 aa8.09□□□□□ -1.11
Nup88-203ENSMUST00000108531 Dnah7bL7N1Y0 4068 aa8.09□□□□□ -1.11
Nup88-203ENSMUST00000108531 Dnah10D3YYQ8 4591 aa8.09□□□□□ -1.11
Nup88-203ENSMUST00000108531 AW011738F6S7Q2 159 aa8.09□□□□□ -1.11
Nup88-203ENSMUST00000108531 Ube2aQ9Z255 152 aa8.09□□□□□ -1.11
Nup88-203ENSMUST00000108531 2310061N02RikQ9D6S9 174 aa8.08□□□□□ -1.12
Nup88-203ENSMUST00000108531 Gm10197F6QEY5 67 aa8.08□□□□□ -1.12
Nup88-203ENSMUST00000108531 Wfdc10Q3V2J9 124 aa8.06□□□□□ -1.12
Nup88-203ENSMUST00000108531 AI606181Q8C7B9 129 aa8.06□□□□□ -1.12
Nup88-203ENSMUST00000108531 Phf5aP83870 110 aaKnown RBP8.05□□□□□ -1.12
Nup88-203ENSMUST00000108531 Gm10837Q3UTT8 145 aa8.05□□□□□ -1.12
Nup88-203ENSMUST00000108531 1700074P13RikQ9D9G7 251 aa8.05□□□□□ -1.12
Nup88-203ENSMUST00000108531 Gm20604F8WIA3 75 aa8.05□□□□□ -1.12
Nup88-203ENSMUST00000108531 VwfQ8CIZ8 2813 aa8.04□□□□□ -1.12
Nup88-203ENSMUST00000108531 Rpl37aP61514 92 aa8.04□□□□□ -1.12
Nup88-203ENSMUST00000108531 Igkv3-7A0A0G2JE31 119 aa8.03□□□□□ -1.12
Nup88-203ENSMUST00000108531 Dnah6E9Q0B6 4144 aa8.03□□□□□ -1.12
Nup88-203ENSMUST00000108531 9530053A07RikE9PVG8 2581 aa8.02□□□□□ -1.13
Nup88-203ENSMUST00000108531 Gm2310J3QNJ2 377 aa8□□□□□ -1.13
Nup88-203ENSMUST00000108531 Bean1Q9EQG5 255 aa7.98□□□□□ -1.13
Nup88-203ENSMUST00000108531 Igkv3-5A0A140T8M6 119 aa7.97□□□□□ -1.13
Nup88-203ENSMUST00000108531 Spata3Q9D9T6 193 aa7.96□□□□□ -1.13
Nup88-203ENSMUST00000108531 Defb9Q8R2I6 67 aa7.95□□□□□ -1.14
Nup88-203ENSMUST00000108531 Gm9508A0A1W2P7W0 230 aa7.95□□□□□ -1.14
Nup88-203ENSMUST00000108531 Gm27235Q3UW50 83 aa7.95□□□□□ -1.14
Nup88-203ENSMUST00000108531 1700012A03RikQ9DAF1 130 aa7.95□□□□□ -1.14
Nup88-203ENSMUST00000108531 HrnrQ8VHD8 2496 aa7.95□□□□□ -1.14
Nup88-203ENSMUST00000108531 Q8K1L6 76 aa7.94□□□□□ -1.14
Nup88-203ENSMUST00000108531 6030445D17RikE9Q8F9 148 aa7.93□□□□□ -1.14
Nup88-203ENSMUST00000108531 Nupr2Q497P3 102 aa7.93□□□□□ -1.14
Nup88-203ENSMUST00000108531 Defb10Q8R2I8 73 aa7.93□□□□□ -1.14
Nup88-203ENSMUST00000108531 Chtf8P0CG14 533 aa7.92□□□□□ -1.14
Nup88-203ENSMUST00000108531 Gm28374F6SG70 93 aa7.91□□□□□ -1.14
Nup88-203ENSMUST00000108531 Phxr4P15974 95 aa7.91□□□□□ -1.14
Nup88-203ENSMUST00000108531 Gm10267M0QWD8 85 aa7.9□□□□□ -1.15
Nup88-203ENSMUST00000108531 Dync2h1Q45VK7 4306 aa7.89□□□□□ -1.15
Nup88-203ENSMUST00000108531 Gm10642Q3TWM1 71 aa7.88□□□□□ -1.15
Nup88-203ENSMUST00000108531 Sox16Q62247 57 aa7.87□□□□□ -1.15
Nup88-203ENSMUST00000108531 Gm10065F6TJM2 114 aa7.87□□□□□ -1.15
Nup88-203ENSMUST00000108531 Dnah11E9Q7N9 4488 aa7.86□□□□□ -1.15
Nup88-203ENSMUST00000108531 Csmd3Q80T79 3707 aa7.86□□□□□ -1.15
Nup88-203ENSMUST00000108531 Megf8P60882 2789 aa7.85□□□□□ -1.15
Nup88-203ENSMUST00000108531 Tenm2Q9WTS5 2764 aa7.85□□□□□ -1.15
Nup88-203ENSMUST00000108531 Stab2Q8R4U0 2559 aa7.84□□□□□ -1.15
Nup88-203ENSMUST00000108531 4933415A04RikQ9D443 101 aa7.84□□□□□ -1.16
Nup88-203ENSMUST00000108531 Dnah9B1AR51 4484 aa7.83□□□□□ -1.16
Nup88-203ENSMUST00000108531 Gm10160F6Y577 67 aa7.83□□□□□ -1.16
Nup88-203ENSMUST00000108531 Plac8Q9JI48 112 aa7.83□□□□□ -1.16
Nup88-203ENSMUST00000108531 FasnP19096 2504 aaKnown RBP7.82□□□□□ -1.16
Nup88-203ENSMUST00000108531 Gm17349F7BGH6 99 aa7.82□□□□□ -1.16
Nup88-203ENSMUST00000108531 Krtap29-1A2A5X4 342 aa7.81□□□□□ -1.16
Nup88-203ENSMUST00000108531 Igsf10Q3V1M1 2594 aa7.81□□□□□ -1.16
Nup88-203ENSMUST00000108531 Muc6Q80T03 2850 aa7.8□□□□□ -1.16
Nup88-203ENSMUST00000108531 Huwe1Q7TMY8 4377 aaKnown RBP7.8□□□□□ -1.16
Nup88-203ENSMUST00000108531 Igkv3-3A0A140T8Q0 119 aa7.8□□□□□ -1.16
Nup88-203ENSMUST00000108531 Gm4707V9GXN5 68 aa7.79□□□□□ -1.16
Nup88-203ENSMUST00000108531 Znf706Q9D115 76 aaKnown RBP7.78□□□□□ -1.16
Nup88-203ENSMUST00000108531 Cypt14J3QPF7 87 aa7.78□□□□□ -1.16
Nup88-203ENSMUST00000108531 NbdyA0A0N4SUI7 68 aa7.74□□□□□ -1.17
Nup88-203ENSMUST00000108531 Sec61gP60060 68 aa7.74□□□□□ -1.17
Nup88-203ENSMUST00000108531 Gm16253D3Z167 63 aa7.74□□□□□ -1.17
Retrieved 100 of 22,080 RNA–protein pairs in 68.9 ms