RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 A330070K13RikQ8CA53 115 aa5.44□□□□□ -1.54
Cdc40-201ENSMUST00000044166 Ighv8-13A0A075B5Y0 101 aa5.44□□□□□ -1.54
Cdc40-201ENSMUST00000044166 A730009L09RikA0A1B0GS82 72 aa5.43□□□□□ -1.54
Cdc40-201ENSMUST00000044166 Col7a1Q63870 2944 aa5.43□□□□□ -1.54
Cdc40-201ENSMUST00000044166 Defb2P82020 71 aa5.43□□□□□ -1.54
Cdc40-201ENSMUST00000044166 Gm7276Q3TYW4 209 aa5.43□□□□□ -1.54
Cdc40-201ENSMUST00000044166 Gm20538F6Z9R1 75 aa5.43□□□□□ -1.54
Cdc40-201ENSMUST00000044166 Krtap24-1G3X9A2 248 aa5.43□□□□□ -1.54
Cdc40-201ENSMUST00000044166 Camk2n2Q78WH7 79 aa5.43□□□□□ -1.54
Cdc40-201ENSMUST00000044166 B9d2Q3UK10 175 aa5.42□□□□□ -1.54
Cdc40-201ENSMUST00000044166 PolqQ8CGS6 2544 aa5.42□□□□□ -1.54
Cdc40-201ENSMUST00000044166 Igkv3-2A0A075B5P0 119 aa5.41□□□□□ -1.54
Cdc40-201ENSMUST00000044166 Defb40Q70KL2 73 aa5.4□□□□□ -1.54
Cdc40-201ENSMUST00000044166 Cox6a2P43023 97 aa5.39□□□□□ -1.55
Cdc40-201ENSMUST00000044166 Chchd10Q7TNL9 138 aa5.39□□□□□ -1.55
Cdc40-201ENSMUST00000044166 A0A286YE49 62 aa5.39□□□□□ -1.55
Cdc40-201ENSMUST00000044166 Snhg11Q4G0K9 87 aa5.39□□□□□ -1.55
Cdc40-201ENSMUST00000044166 Sprr4Q8CGN8 76 aa5.39□□□□□ -1.55
Cdc40-201ENSMUST00000044166 C130032M10RikQ8C888 123 aa5.38□□□□□ -1.55
Cdc40-201ENSMUST00000044166 Smim29Q8R043 75 aa5.38□□□□□ -1.55
Cdc40-201ENSMUST00000044166 Cypt14J3QPF7 87 aa5.37□□□□□ -1.55
Cdc40-201ENSMUST00000044166 Tex15F8VPN2 2785 aa5.37□□□□□ -1.55
Cdc40-201ENSMUST00000044166 Gm16485Q8C4B7 115 aa5.37□□□□□ -1.55
Cdc40-201ENSMUST00000044166 Igkv8-19A0A0G2JFN8 121 aa5.36□□□□□ -1.55
Cdc40-201ENSMUST00000044166 Gm3250E9Q1M3 230 aa5.36□□□□□ -1.55
Cdc40-201ENSMUST00000044166 Mrpl34Q99N91 92 aa5.36□□□□□ -1.55
Cdc40-201ENSMUST00000044166 9530053A07RikE9PVG8 2581 aa5.34□□□□□ -1.55
Cdc40-201ENSMUST00000044166 Krtap10-10A0A1W2P7T6 217 aa5.34□□□□□ -1.56
Cdc40-201ENSMUST00000044166 Gm44790A0A0N4SV91 103 aa5.33□□□□□ -1.56
Cdc40-201ENSMUST00000044166 Dmac1Q9CQ00 111 aa5.33□□□□□ -1.56
Cdc40-201ENSMUST00000044166 Tenm4Q3UHK6 2771 aa5.32□□□□□ -1.56
Cdc40-201ENSMUST00000044166 Gm12353A2AGJ4 60 aa5.32□□□□□ -1.56
Cdc40-201ENSMUST00000044166 Gm20661K7N787 53 aa5.32□□□□□ -1.56
Cdc40-201ENSMUST00000044166 ApcQ61315 2845 aa5.32□□□□□ -1.56
Cdc40-201ENSMUST00000044166 Nbeal2Q6ZQA0 2742 aa5.32□□□□□ -1.56
Cdc40-201ENSMUST00000044166 PtprqP0C5E4 2300 aa5.32□□□□□ -1.56
Cdc40-201ENSMUST00000044166 PscaP57096 123 aa5.31□□□□□ -1.56
Cdc40-201ENSMUST00000044166 1700012A03RikQ9DAF1 130 aa5.31□□□□□ -1.56
Cdc40-201ENSMUST00000044166 Gm10267M0QWD8 85 aa5.31□□□□□ -1.56
Cdc40-201ENSMUST00000044166 Cypt15B1AXS0 87 aa5.3□□□□□ -1.56
Cdc40-201ENSMUST00000044166 Vpreb3D3Z6J4 130 aa5.3□□□□□ -1.56
Cdc40-201ENSMUST00000044166 Gm37013Q8K491 104 aa5.3□□□□□ -1.56
Cdc40-201ENSMUST00000044166 CicQ924A2 2510 aa5.3□□□□□ -1.56
Cdc40-201ENSMUST00000044166 P84750 121 aa5.3□□□□□ -1.56
Cdc40-201ENSMUST00000044166 AtrQ9JKK8 2635 aa5.29□□□□□ -1.56
Cdc40-201ENSMUST00000044166 Gm3233E9Q2H5 230 aa5.29□□□□□ -1.56
Cdc40-201ENSMUST00000044166 Gm11627A6PWP4 55 aa5.28□□□□□ -1.56
Cdc40-201ENSMUST00000044166 Ndufb1P0DN34 57 aa5.28□□□□□ -1.56
Cdc40-201ENSMUST00000044166 HrnrQ8VHD8 2496 aa5.28□□□□□ -1.56
Cdc40-201ENSMUST00000044166 Chtf8P0CG14 533 aa5.27□□□□□ -1.57
Cdc40-201ENSMUST00000044166 6030445D17RikE9Q8F9 148 aa5.27□□□□□ -1.57
Cdc40-201ENSMUST00000044166 Phxr5P08399 672 aa5.27□□□□□ -1.57
Cdc40-201ENSMUST00000044166 Gm21886J3QJU9 214 aa5.26□□□□□ -1.57
Cdc40-201ENSMUST00000044166 Fam168bQ80XQ8 194 aa5.26□□□□□ -1.57
Cdc40-201ENSMUST00000044166 Prol1E9PYQ4 312 aa5.26□□□□□ -1.57
Cdc40-201ENSMUST00000044166 1700018G05RikA0A1B0GSI2 66 aa5.26□□□□□ -1.57
Cdc40-201ENSMUST00000044166 AplnQ9R0R4 77 aa5.25□□□□□ -1.57
Cdc40-201ENSMUST00000044166 Sprr1aQ62266 144 aa5.24□□□□□ -1.57
Cdc40-201ENSMUST00000044166 Igkv3-5A0A140T8M6 119 aa5.23□□□□□ -1.57
Cdc40-201ENSMUST00000044166 Q8BGJ3 129 aa5.23□□□□□ -1.57
Cdc40-201ENSMUST00000044166 Gm4707V9GXN5 68 aa5.23□□□□□ -1.57
Cdc40-201ENSMUST00000044166 Hivep1Q03172 2688 aa5.23□□□□□ -1.57
Cdc40-201ENSMUST00000044166 Notch1Q01705 2531 aa5.22□□□□□ -1.57
Cdc40-201ENSMUST00000044166 Fbn1Q61554 2873 aaKnown RBP5.2□□□□□ -1.58
Cdc40-201ENSMUST00000044166 Tenm1Q9WTS4 2731 aa5.2□□□□□ -1.58
Cdc40-201ENSMUST00000044166 Zcchc13Q9D548 170 aa5.19□□□□□ -1.58
Cdc40-201ENSMUST00000044166 Gm28230A0A0A0MQ91 144 aa5.19□□□□□ -1.58
Cdc40-201ENSMUST00000044166 Pla2g10Q9QXX3 151 aa5.19□□□□□ -1.58
Cdc40-201ENSMUST00000044166 Stab1Q8R4Y4 2571 aa5.18□□□□□ -1.58
Cdc40-201ENSMUST00000044166 Rpl37aP61514 92 aa5.18□□□□□ -1.58
Cdc40-201ENSMUST00000044166 Wfdc10Q3V2J9 124 aa5.18□□□□□ -1.58
Cdc40-201ENSMUST00000044166 Gm21887J3QQ04 176 aa5.17□□□□□ -1.58
Cdc40-201ENSMUST00000044166 Odf3bQ5M8M2 238 aa5.16□□□□□ -1.58
Cdc40-201ENSMUST00000044166 FasnP19096 2504 aaKnown RBP5.16□□□□□ -1.58
Cdc40-201ENSMUST00000044166 Romo1P60603 79 aa5.16□□□□□ -1.58
Cdc40-201ENSMUST00000044166 CriptO70333 101 aa5.14□□□□□ -1.59
Cdc40-201ENSMUST00000044166 Col6a5A6H584 2640 aa5.14□□□□□ -1.59
Cdc40-201ENSMUST00000044166 Gm10139O88245 57 aa5.13□□□□□ -1.59
Cdc40-201ENSMUST00000044166 Itpr2Q9Z329 2701 aa5.13□□□□□ -1.59
Cdc40-201ENSMUST00000044166 Limd2Q8BGB5 128 aa5.12□□□□□ -1.59
Cdc40-201ENSMUST00000044166 Nsd1O88491 2588 aaKnown RBP5.12□□□□□ -1.59
Cdc40-201ENSMUST00000044166 TgO08710 2766 aa5.12□□□□□ -1.59
Cdc40-201ENSMUST00000044166 Gm2310J3QNJ2 377 aa5.11□□□□□ -1.59
Cdc40-201ENSMUST00000044166 Sslp1Q3UN54 99 aa5.11□□□□□ -1.59
Cdc40-201ENSMUST00000044166 SycnQ8VCK7 134 aa5.11□□□□□ -1.59
Cdc40-201ENSMUST00000044166 Kmt2aP55200 3966 aa5.11□□□□□ -1.59
Cdc40-201ENSMUST00000044166 Igsf10Q3V1M1 2594 aa5.1□□□□□ -1.59
Cdc40-201ENSMUST00000044166 Dnah3Q8BW94 4083 aa5.09□□□□□ -1.59
Cdc40-201ENSMUST00000044166 Gm7138L7N2C3 230 aa5.09□□□□□ -1.59
Cdc40-201ENSMUST00000044166 Defb9Q8R2I6 67 aa5.09□□□□□ -1.59
Cdc40-201ENSMUST00000044166 Gm3238W4VSP7 230 aa5.09□□□□□ -1.59
Cdc40-201ENSMUST00000044166 VwfQ8CIZ8 2813 aa5.08□□□□□ -1.6
Cdc40-201ENSMUST00000044166 FcgbpE9Q0B5 2583 aa5.07□□□□□ -1.6
Cdc40-201ENSMUST00000044166 Plac8Q9JI48 112 aa5.07□□□□□ -1.6
Cdc40-201ENSMUST00000044166 Srrm2Q8BTI8 2703 aaKnown RBP5.06□□□□□ -1.6
Cdc40-201ENSMUST00000044166 Gm7137J3QMW1 236 aa5.04□□□□□ -1.6
Cdc40-201ENSMUST00000044166 Q8K1L6 76 aa5.02□□□□□ -1.61
Cdc40-201ENSMUST00000044166 Dnah7bL7N1Y0 4068 aa5.02□□□□□ -1.61
Cdc40-201ENSMUST00000044166 Ndufaf8A2AMZ4 74 aa5.01□□□□□ -1.61
Cdc40-201ENSMUST00000044166 Megf8P60882 2789 aa5.01□□□□□ -1.61
Retrieved 100 of 22,080 RNA–protein pairs in 50 ms