RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Prune2Q52KR3 3084 aa8.69□□□□□ -1.02
Col5a1-201ENSMUST00000028280 Gm10065F6TJM2 114 aa8.68□□□□□ -1.02
Col5a1-201ENSMUST00000028280 Rpl37Q9D823 97 aa8.68□□□□□ -1.02
Col5a1-201ENSMUST00000028280 NbdyA0A0N4SUI7 68 aa8.67□□□□□ -1.02
Col5a1-201ENSMUST00000028280 1700042G07RikB1AUF7 90 aa8.65□□□□□ -1.03
Col5a1-201ENSMUST00000028280 Fam229aB2KGE5 128 aa8.63□□□□□ -1.03
Col5a1-201ENSMUST00000028280 Gm10382Q3V0T5 144 aa8.63□□□□□ -1.03
Col5a1-201ENSMUST00000028280 Gm37013Q8K491 104 aa8.63□□□□□ -1.03
Col5a1-201ENSMUST00000028280 Cystm1Q8K353 104 aa8.6□□□□□ -1.03
Col5a1-201ENSMUST00000028280 Krtap15-1Q9QZU5 150 aa8.6□□□□□ -1.03
Col5a1-201ENSMUST00000028280 NipblQ6KCD5 2798 aaKnown RBP8.6□□□□□ -1.03
Col5a1-201ENSMUST00000028280 Mast4Q811L6 2618 aa8.57□□□□□ -1.04
Col5a1-201ENSMUST00000028280 Bod1lE9Q6J5 3032 aa8.55□□□□□ -1.04
Col5a1-201ENSMUST00000028280 Gm10320E9PW43 113 aa8.53□□□□□ -1.04
Col5a1-201ENSMUST00000028280 Gm10139O88245 57 aa8.51□□□□□ -1.05
Col5a1-201ENSMUST00000028280 Tep1P97499 2629 aa8.5□□□□□ -1.05
Col5a1-201ENSMUST00000028280 Ranbp2Q9ERU9 3053 aaKnown RBP8.49□□□□□ -1.05
Col5a1-201ENSMUST00000028280 Chd6A3KFM7 2711 aa8.49□□□□□ -1.05
Col5a1-201ENSMUST00000028280 4933415A04RikQ9D443 101 aa8.47□□□□□ -1.05
Col5a1-201ENSMUST00000028280 Lama2Q60675 3118 aaKnown RBP8.47□□□□□ -1.05
Col5a1-201ENSMUST00000028280 Sec61bQ9CQS8 96 aaKnown RBP8.46□□□□□ -1.06
Col5a1-201ENSMUST00000028280 Gm19426M0QWC7 77 aa8.45□□□□□ -1.06
Col5a1-201ENSMUST00000028280 Igsf10Q3V1M1 2594 aa8.44□□□□□ -1.06
Col5a1-201ENSMUST00000028280 Stab2Q8R4U0 2559 aa8.44□□□□□ -1.06
Col5a1-201ENSMUST00000028280 BC029722A0A0N4SW31 51 aa8.43□□□□□ -1.06
Col5a1-201ENSMUST00000028280 Gm11565A2A4M7 156 aa8.43□□□□□ -1.06
Col5a1-201ENSMUST00000028280 Tnrc18Q80WC3 2878 aa8.43□□□□□ -1.06
Col5a1-201ENSMUST00000028280 Gm16253D3Z167 63 aa8.4□□□□□ -1.06
Col5a1-201ENSMUST00000028280 Lama3Q61789 3330 aa8.39□□□□□ -1.07
Col5a1-201ENSMUST00000028280 Sprr1aQ62266 144 aa8.39□□□□□ -1.07
Col5a1-201ENSMUST00000028280 A730071L15RikQ8C4X0 137 aa8.36□□□□□ -1.07
Col5a1-201ENSMUST00000028280 Ndufaf8A2AMZ4 74 aa8.34□□□□□ -1.07
Col5a1-201ENSMUST00000028280 Gm3233E9Q2H5 230 aa8.32□□□□□ -1.08
Col5a1-201ENSMUST00000028280 Pkd1l1Q8R526 2615 aa8.32□□□□□ -1.08
Col5a1-201ENSMUST00000028280 Dmxl1Q6PNC0 3013 aa8.32□□□□□ -1.08
Col5a1-201ENSMUST00000028280 Cox6b2Q80ZN9 88 aa8.31□□□□□ -1.08
Col5a1-201ENSMUST00000028280 Itpr3P70227 2670 aa8.3□□□□□ -1.08
Col5a1-201ENSMUST00000028280 2310050C09RikG5E8Z3 280 aa8.29□□□□□ -1.08
Col5a1-201ENSMUST00000028280 TrioQ0KL02 3102 aa8.29□□□□□ -1.08
Col5a1-201ENSMUST00000028280 Ash1lQ99MY8 2958 aa8.28□□□□□ -1.08
Col5a1-201ENSMUST00000028280 Gm9112A2AI92 75 aa8.26□□□□□ -1.09
Col5a1-201ENSMUST00000028280 Gm5767A0A0J9YTU8 78 aa8.25□□□□□ -1.09
Col5a1-201ENSMUST00000028280 Krtap29-1A2A5X4 342 aa8.24□□□□□ -1.09
Col5a1-201ENSMUST00000028280 ApcQ61315 2845 aa8.23□□□□□ -1.09
Col5a1-201ENSMUST00000028280 Mki67E9PVX6 3177 aaKnown RBP8.22□□□□□ -1.09
Col5a1-201ENSMUST00000028280 Usp34Q6ZQ93 3582 aa8.21□□□□□ -1.09
Col5a1-201ENSMUST00000028280 Col6a5A6H584 2640 aa8.21□□□□□ -1.1
Col5a1-201ENSMUST00000028280 Gm7138L7N2C3 230 aa8.2□□□□□ -1.1
Col5a1-201ENSMUST00000028280 Gm3238W4VSP7 230 aa8.2□□□□□ -1.1
Col5a1-201ENSMUST00000028280 Gm9508A0A1W2P7W0 230 aa8.19□□□□□ -1.1
Col5a1-201ENSMUST00000028280 MgaA2AWL7 3003 aaKnown RBP8.18□□□□□ -1.1
Col5a1-201ENSMUST00000028280 Itpr2Q9Z329 2701 aa8.18□□□□□ -1.1
Col5a1-201ENSMUST00000028280 Chd7A2AJK6 2986 aaKnown RBP8.17□□□□□ -1.1
Col5a1-201ENSMUST00000028280 BptfA2A654 3036 aaKnown RBP8.16□□□□□ -1.1
Col5a1-201ENSMUST00000028280 Rev3lQ61493 3122 aa8.15□□□□□ -1.1
Col5a1-201ENSMUST00000028280 Vps13aQ5H8C4 3166 aa8.15□□□□□ -1.1
Col5a1-201ENSMUST00000028280 Itpr1P11881 2749 aa8.13□□□□□ -1.11
Col5a1-201ENSMUST00000028280 Col12a1Q60847 3120 aa8.13□□□□□ -1.11
Col5a1-201ENSMUST00000028280 Lelp1Q9DAE3 120 aa8.13□□□□□ -1.11
Col5a1-201ENSMUST00000028280 Ubr5Q80TP3 2792 aa8.13□□□□□ -1.11
Col5a1-201ENSMUST00000028280 Utp20Q5XG71 2788 aaKnown RBP8.11□□□□□ -1.11
Col5a1-201ENSMUST00000028280 Cfap54Q8C6S9 3106 aa8.1□□□□□ -1.11
Col5a1-201ENSMUST00000028280 Gm7173A0A0G2JEB6 3132 aa8.1□□□□□ -1.11
Col5a1-201ENSMUST00000028280 Fbn2Q61555 2907 aa8.08□□□□□ -1.12
Col5a1-201ENSMUST00000028280 SmcpP15265 143 aa8.08□□□□□ -1.12
Col5a1-201ENSMUST00000028280 Gm17349F7BGH6 99 aa8.07□□□□□ -1.12
Col5a1-201ENSMUST00000028280 Gm7137J3QMW1 236 aa8.07□□□□□ -1.12
Col5a1-201ENSMUST00000028280 Nbeal2Q6ZQA0 2742 aa8.06□□□□□ -1.12
Col5a1-201ENSMUST00000028280 DspE9Q557 2883 aaKnown RBP8.04□□□□□ -1.12
Col5a1-201ENSMUST00000028280 AtmQ62388 3066 aa8.04□□□□□ -1.12
Col5a1-201ENSMUST00000028280 Krtap14O08640 167 aa8.03□□□□□ -1.12
Col5a1-201ENSMUST00000028280 Unc80Q8BLN6 3261 aa8.03□□□□□ -1.12
Col5a1-201ENSMUST00000028280 Gm2310J3QNJ2 377 aa8.02□□□□□ -1.13
Col5a1-201ENSMUST00000028280 Celsr3Q91ZI0 3301 aa8.01□□□□□ -1.13
Col5a1-201ENSMUST00000028280 KalrnA2CG49 2964 aa8.01□□□□□ -1.13
Col5a1-201ENSMUST00000028280 Cdh23Q99PF4 3354 aa8.01□□□□□ -1.13
Col5a1-201ENSMUST00000028280 Rps29P62274 56 aa8□□□□□ -1.13
Col5a1-201ENSMUST00000028280 Tex15F8VPN2 2785 aa8□□□□□ -1.13
Col5a1-201ENSMUST00000028280 FryE9Q8I9 3020 aa7.99□□□□□ -1.13
Col5a1-201ENSMUST00000028280 Gm21887J3QQ04 176 aa7.98□□□□□ -1.13
Col5a1-201ENSMUST00000028280 Tnp1P10856 55 aa7.98□□□□□ -1.13
Col5a1-201ENSMUST00000028280 FrylF8VQ05 3007 aa7.96□□□□□ -1.14
Col5a1-201ENSMUST00000028280 Gm40193A0A1B0GT39 78 aa7.96□□□□□ -1.14
Col5a1-201ENSMUST00000028280 Krtap13O88375 197 aa7.93□□□□□ -1.14
Col5a1-201ENSMUST00000028280 Zfhx3Q61329 3726 aa7.9□□□□□ -1.14
Col5a1-201ENSMUST00000028280 HttP42859 3119 aa7.9□□□□□ -1.15
Col5a1-201ENSMUST00000028280 Wdfy4E9Q2M9 3149 aa7.87□□□□□ -1.15
Col5a1-201ENSMUST00000028280 Srrm2Q8BTI8 2703 aaKnown RBP7.85□□□□□ -1.15
Col5a1-201ENSMUST00000028280 Muc2Q80Z19 2680 aa7.84□□□□□ -1.15
Col5a1-201ENSMUST00000028280 Frem2Q6NVD0 3160 aa7.83□□□□□ -1.16
Col5a1-201ENSMUST00000028280 Gm36176A0A1W2P8D5 158 aa7.83□□□□□ -1.16
Col5a1-201ENSMUST00000028280 D6Ertd527eA0A0N4SWI3 464 aa7.82□□□□□ -1.16
Col5a1-201ENSMUST00000028280 FcgbpE9Q0B5 2583 aa7.78□□□□□ -1.16
Col5a1-201ENSMUST00000028280 Celsr1O35161 3034 aa7.76□□□□□ -1.17
Col5a1-201ENSMUST00000028280 Zzef1Q5SSH7 2924 aa7.76□□□□□ -1.17
Col5a1-201ENSMUST00000028280 AspmQ8CJ27 3122 aa7.73□□□□□ -1.17
Col5a1-201ENSMUST00000028280 TgO08710 2766 aa7.71□□□□□ -1.17
Col5a1-201ENSMUST00000028280 Tnp2P11378 117 aa7.71□□□□□ -1.18
Col5a1-201ENSMUST00000028280 Lama1P19137 3084 aa7.7□□□□□ -1.18
Col5a1-201ENSMUST00000028280 Myo15bI7HPW8 3033 aa7.69□□□□□ -1.18
Retrieved 100 of 22,080 RNA–protein pairs in 44.1 ms