RNA–Protein interactions for RNA: ENSMUST00000021956.8

Ddx41-201, Transcript of Probable ATP-dependent RNA helicase DDX41, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx41, Length 2,205 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41-201ENSMUST00000021956 PscaP57096 123 aa11.63□□□□□ -0.55
Ddx41-201ENSMUST00000021956 Defb40Q70KL2 73 aa11.62□□□□□ -0.55
Ddx41-201ENSMUST00000021956 Coa5Q99M07 74 aa11.62□□□□□ -0.55
Ddx41-201ENSMUST00000021956 Gm17521F6QAC8 156 aa11.62□□□□□ -0.55
Ddx41-201ENSMUST00000021956 Defb10Q8R2I8 73 aa11.62□□□□□ -0.55
Ddx41-201ENSMUST00000021956 Wfdc6bF6ULY1 148 aa11.6□□□□□ -0.55
Ddx41-201ENSMUST00000021956 Igkv3-10A0A0G2JGN0 119 aa11.59□□□□□ -0.55
Ddx41-201ENSMUST00000021956 Prol1E9PYQ4 312 aa11.59□□□□□ -0.55
Ddx41-201ENSMUST00000021956 Sox16Q62247 57 aa11.59□□□□□ -0.55
Ddx41-201ENSMUST00000021956 Defb12Q8K4N3 78 aa11.58□□□□□ -0.56
Ddx41-201ENSMUST00000021956 Obox2E9PXV9 151 aa11.57□□□□□ -0.56
Ddx41-201ENSMUST00000021956 Sprr1aQ62266 144 aa11.57□□□□□ -0.56
Ddx41-201ENSMUST00000021956 AplnQ9R0R4 77 aa11.57□□□□□ -0.56
Ddx41-201ENSMUST00000021956 Srrm2Q8BTI8 2703 aaKnown RBP11.56□□□□□ -0.56
Ddx41-201ENSMUST00000021956 Wfdc17Q5SSJ1 76 aa11.55□□□□□ -0.56
Ddx41-201ENSMUST00000021956 Fam168bQ80XQ8 194 aa11.54□□□□□ -0.56
Ddx41-201ENSMUST00000021956 Gm21886J3QJU9 214 aa11.52□□□□□ -0.57
Ddx41-201ENSMUST00000021956 Igkv3-12A0A140T8P0 119 aa11.51□□□□□ -0.57
Ddx41-201ENSMUST00000021956 Ube2bP63147 152 aa11.51□□□□□ -0.57
Ddx41-201ENSMUST00000021956 1700018G05RikA0A1B0GSI2 66 aa11.5□□□□□ -0.57
Ddx41-201ENSMUST00000021956 A0A286YE49 62 aa11.5□□□□□ -0.57
Ddx41-201ENSMUST00000021956 Gm16485Q8C4B7 115 aa11.5□□□□□ -0.57
Ddx41-201ENSMUST00000021956 ApcQ61315 2845 aa11.49□□□□□ -0.57
Ddx41-201ENSMUST00000021956 U90926O08546 118 aa11.48□□□□□ -0.57
Ddx41-201ENSMUST00000021956 4933415A04RikQ9D443 101 aa11.48□□□□□ -0.57
Ddx41-201ENSMUST00000021956 Gm36176A0A1W2P8D5 158 aa11.47□□□□□ -0.57
Ddx41-201ENSMUST00000021956 Fam104aA2A6P4 185 aa11.45□□□□□ -0.58
Ddx41-201ENSMUST00000021956 Phxr4P15974 95 aa11.43□□□□□ -0.58
Ddx41-201ENSMUST00000021956 Spata3Q9D9T6 193 aa11.43□□□□□ -0.58
Ddx41-201ENSMUST00000021956 Gm28374F6SG70 93 aa11.42□□□□□ -0.58
Ddx41-201ENSMUST00000021956 Reg3aO09037 175 aa11.42□□□□□ -0.58
Ddx41-201ENSMUST00000021956 Chchd10Q7TNL9 138 aa11.41□□□□□ -0.58
Ddx41-201ENSMUST00000021956 1700074P13RikQ9D9G7 251 aa11.41□□□□□ -0.58
Ddx41-201ENSMUST00000021956 Zcchc13Q9D548 170 aa11.4□□□□□ -0.58
Ddx41-201ENSMUST00000021956 PtprqP0C5E4 2300 aa11.38□□□□□ -0.59
Ddx41-201ENSMUST00000021956 Gm28230A0A0A0MQ91 144 aa11.37□□□□□ -0.59
Ddx41-201ENSMUST00000021956 Gm20604F8WIA3 75 aa11.37□□□□□ -0.59
Ddx41-201ENSMUST00000021956 B9d2Q3UK10 175 aa11.37□□□□□ -0.59
Ddx41-201ENSMUST00000021956 VwfQ8CIZ8 2813 aa11.36□□□□□ -0.59
Ddx41-201ENSMUST00000021956 Odf3bQ5M8M2 238 aa11.36□□□□□ -0.59
Ddx41-201ENSMUST00000021956 FcgbpE9Q0B5 2583 aa11.35□□□□□ -0.59
Ddx41-201ENSMUST00000021956 Gm7138L7N2C3 230 aa11.34□□□□□ -0.59
Ddx41-201ENSMUST00000021956 Gm3238W4VSP7 230 aa11.34□□□□□ -0.59
Ddx41-201ENSMUST00000021956 Kmt2aP55200 3966 aa11.33□□□□□ -0.6
Ddx41-201ENSMUST00000021956 Gm10139O88245 57 aa11.32□□□□□ -0.6
Ddx41-201ENSMUST00000021956 Sec61gP60060 68 aa11.32□□□□□ -0.6
Ddx41-201ENSMUST00000021956 Gm7137J3QMW1 236 aa11.32□□□□□ -0.6
Ddx41-201ENSMUST00000021956 Rpl37aP61514 92 aa11.3□□□□□ -0.6
Ddx41-201ENSMUST00000021956 Chtf8P0CG14 533 aa11.28□□□□□ -0.6
Ddx41-201ENSMUST00000021956 Wfdc13Q5DQQ6 81 aa11.28□□□□□ -0.6
Ddx41-201ENSMUST00000021956 Gm2310J3QNJ2 377 aa11.28□□□□□ -0.6
Ddx41-201ENSMUST00000021956 Ube2aQ9Z255 152 aa11.27□□□□□ -0.61
Ddx41-201ENSMUST00000021956 Dnah3Q8BW94 4083 aa11.26□□□□□ -0.61
Ddx41-201ENSMUST00000021956 TnxbO35452 4006 aa11.25□□□□□ -0.61
Ddx41-201ENSMUST00000021956 Dnah10D3YYQ8 4591 aa11.22□□□□□ -0.61
Ddx41-201ENSMUST00000021956 Dnah6E9Q0B6 4144 aa11.22□□□□□ -0.61
Ddx41-201ENSMUST00000021956 SycnQ8VCK7 134 aa11.19□□□□□ -0.62
Ddx41-201ENSMUST00000021956 Wfdc10Q3V2J9 124 aa11.19□□□□□ -0.62
Ddx41-201ENSMUST00000021956 Igkv3-7A0A0G2JE31 119 aa11.18□□□□□ -0.62
Ddx41-201ENSMUST00000021956 Gm10643Q3URG9 111 aa11.17□□□□□ -0.62
Ddx41-201ENSMUST00000021956 Gm10160F6Y577 67 aa11.17□□□□□ -0.62
Ddx41-201ENSMUST00000021956 Notch1Q01705 2531 aa11.15□□□□□ -0.62
Ddx41-201ENSMUST00000021956 Gm10267M0QWD8 85 aa11.15□□□□□ -0.62
Ddx41-201ENSMUST00000021956 Megf8P60882 2789 aa11.15□□□□□ -0.62
Ddx41-201ENSMUST00000021956 Sslp1Q3UN54 99 aa11.13□□□□□ -0.63
Ddx41-201ENSMUST00000021956 Phf5aP83870 110 aaKnown RBP11.09□□□□□ -0.63
Ddx41-201ENSMUST00000021956 Dnah1E9Q8T7 4250 aa11.08□□□□□ -0.64
Ddx41-201ENSMUST00000021956 Gm20661K7N787 53 aa11.05□□□□□ -0.64
Ddx41-201ENSMUST00000021956 Ndufb1P0DN34 57 aa11.05□□□□□ -0.64
Ddx41-201ENSMUST00000021956 Igkv3-5A0A140T8M6 119 aa11.04□□□□□ -0.64
Ddx41-201ENSMUST00000021956 Gm10837Q3UTT8 145 aa11.04□□□□□ -0.64
Ddx41-201ENSMUST00000021956 Q8K1L6 76 aa11.04□□□□□ -0.64
Ddx41-201ENSMUST00000021956 SptssbQ925E8 76 aa11.04□□□□□ -0.64
Ddx41-201ENSMUST00000021956 Dnah14A0A140LIJ4 4489 aa11.04□□□□□ -0.64
Ddx41-201ENSMUST00000021956 TgO08710 2766 aa11.04□□□□□ -0.64
Ddx41-201ENSMUST00000021956 Gm26620Q9CY65 116 aa11.03□□□□□ -0.64
Ddx41-201ENSMUST00000021956 Igkv3-3A0A140T8Q0 119 aa11.02□□□□□ -0.65
Ddx41-201ENSMUST00000021956 1700042G07RikB1AUF7 90 aa11.02□□□□□ -0.65
Ddx41-201ENSMUST00000021956 AW011738F6S7Q2 159 aa11.01□□□□□ -0.65
Ddx41-201ENSMUST00000021956 Gm27235Q3UW50 83 aa10.99□□□□□ -0.65
Ddx41-201ENSMUST00000021956 9230102O04RikA2ASX7 82 aa10.99□□□□□ -0.65
Ddx41-201ENSMUST00000021956 Muc6Q80T03 2850 aa10.98□□□□□ -0.65
Ddx41-201ENSMUST00000021956 Pkd1l1Q8R526 2615 aa10.97□□□□□ -0.65
Ddx41-201ENSMUST00000021956 Gm3646F6S692 53 aa10.97□□□□□ -0.65
Ddx41-201ENSMUST00000021956 2310061N02RikQ9D6S9 174 aa10.97□□□□□ -0.65
Ddx41-201ENSMUST00000021956 Dnah7bL7N1Y0 4068 aa10.97□□□□□ -0.65
Ddx41-201ENSMUST00000021956 Tenm2Q9WTS5 2764 aa10.96□□□□□ -0.65
Ddx41-201ENSMUST00000021956 Dnah17Q69Z23 4481 aa10.95□□□□□ -0.66
Ddx41-201ENSMUST00000021956 Defb38Q7TNV7 63 aa10.93□□□□□ -0.66
Ddx41-201ENSMUST00000021956 Defb9Q8R2I6 67 aa10.93□□□□□ -0.66
Ddx41-201ENSMUST00000021956 6030445D17RikE9Q8F9 148 aa10.93□□□□□ -0.66
Ddx41-201ENSMUST00000021956 Limd2Q8BGB5 128 aa10.89□□□□□ -0.67
Ddx41-201ENSMUST00000021956 Ccdc179J3QM76 67 aa10.88□□□□□ -0.67
Ddx41-201ENSMUST00000021956 HrnrQ8VHD8 2496 aa10.88□□□□□ -0.67
Ddx41-201ENSMUST00000021956 Plac8Q9JI48 112 aa10.86□□□□□ -0.67
Ddx41-201ENSMUST00000021956 Defb11Q8R2I7 77 aa10.86□□□□□ -0.67
Ddx41-201ENSMUST00000021956 1700012A03RikQ9DAF1 130 aa10.85□□□□□ -0.67
Ddx41-201ENSMUST00000021956 Gm17349F7BGH6 99 aa10.85□□□□□ -0.67
Ddx41-201ENSMUST00000021956 FasnP19096 2504 aaKnown RBP10.85□□□□□ -0.67
Ddx41-201ENSMUST00000021956 Gm4707V9GXN5 68 aa10.84□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 81.2 ms