RNA–Protein interactions for RNA: ENSMUST00000021921.10

Ptch1-201, Transcript of Protein patched homolog 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ptch1, Length 7,725 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1-201ENSMUST00000021921 Odf3bQ5M8M2 238 aa9.17□□□□□ -0.94
Ptch1-201ENSMUST00000021921 TrioQ0KL02 3102 aa9.12□□□□□ -0.95
Ptch1-201ENSMUST00000021921 Dnah12Q3V0Q1 3086 aa9.09□□□□□ -0.95
Ptch1-201ENSMUST00000021921 AtrQ9JKK8 2635 aa9.08□□□□□ -0.96
Ptch1-201ENSMUST00000021921 Gm5767A0A0J9YTU8 78 aa9.06□□□□□ -0.96
Ptch1-201ENSMUST00000021921 Gm10065F6TJM2 114 aa9.05□□□□□ -0.96
Ptch1-201ENSMUST00000021921 Prune2Q52KR3 3084 aa9.01□□□□□ -0.97
Ptch1-201ENSMUST00000021921 2310050C09RikG5E8Z3 280 aa9.01□□□□□ -0.97
Ptch1-201ENSMUST00000021921 Bod1lE9Q6J5 3032 aa9.01□□□□□ -0.97
Ptch1-201ENSMUST00000021921 Cep350E9Q309 3095 aa9.01□□□□□ -0.97
Ptch1-201ENSMUST00000021921 Gm37013Q8K491 104 aa8.97□□□□□ -0.97
Ptch1-201ENSMUST00000021921 Myo18bE9PV66 2605 aa8.96□□□□□ -0.98
Ptch1-201ENSMUST00000021921 Gm9195A0A140LHT4 2805 aa8.95□□□□□ -0.98
Ptch1-201ENSMUST00000021921 Mki67E9PVX6 3177 aaKnown RBP8.95□□□□□ -0.98
Ptch1-201ENSMUST00000021921 Ash1lQ99MY8 2958 aa8.94□□□□□ -0.98
Ptch1-201ENSMUST00000021921 Gm17349F7BGH6 99 aa8.93□□□□□ -0.98
Ptch1-201ENSMUST00000021921 Usp34Q6ZQ93 3582 aa8.92□□□□□ -0.98
Ptch1-201ENSMUST00000021921 Cdh23Q99PF4 3354 aa8.88□□□□□ -0.99
Ptch1-201ENSMUST00000021921 Gm3646F6S692 53 aa8.86□□□□□ -0.99
Ptch1-201ENSMUST00000021921 Map1aQ9QYR6 2776 aa8.86□□□□□ -0.99
Ptch1-201ENSMUST00000021921 Krtap29-1A2A5X4 342 aa8.86□□□□□ -0.99
Ptch1-201ENSMUST00000021921 Prrc2cQ3TLH4 2846 aaKnown RBP8.85□□□□□ -0.99
Ptch1-201ENSMUST00000021921 NipblQ6KCD5 2798 aaKnown RBP8.82□□□□□ -1
Ptch1-201ENSMUST00000021921 9530053A07RikE9PVG8 2581 aa8.82□□□□□ -1
Ptch1-201ENSMUST00000021921 Gm10139O88245 57 aa8.77□□□□□ -1.01
Ptch1-201ENSMUST00000021921 FlnaQ8BTM8 2647 aaKnown RBP8.76□□□□□ -1.01
Ptch1-201ENSMUST00000021921 Ranbp2Q9ERU9 3053 aaKnown RBP8.76□□□□□ -1.01
Ptch1-201ENSMUST00000021921 Gm21887J3QQ04 176 aa8.75□□□□□ -1.01
Ptch1-201ENSMUST00000021921 Ndufaf8A2AMZ4 74 aa8.74□□□□□ -1.01
Ptch1-201ENSMUST00000021921 Lama2Q60675 3118 aaKnown RBP8.74□□□□□ -1.01
Ptch1-201ENSMUST00000021921 Gm9112A2AI92 75 aa8.74□□□□□ -1.01
Ptch1-201ENSMUST00000021921 Krtap13O88375 197 aa8.74□□□□□ -1.01
Ptch1-201ENSMUST00000021921 Gm36176A0A1W2P8D5 158 aa8.73□□□□□ -1.01
Ptch1-201ENSMUST00000021921 FlnbQ80X90 2602 aaKnown RBP8.72□□□□□ -1.01
Ptch1-201ENSMUST00000021921 HttP42859 3119 aa8.71□□□□□ -1.02
Ptch1-201ENSMUST00000021921 Tnp1P10856 55 aa8.69□□□□□ -1.02
Ptch1-201ENSMUST00000021921 Zfp292Q9Z2U2 2698 aa8.68□□□□□ -1.02
Ptch1-201ENSMUST00000021921 Gm16253D3Z167 63 aa8.67□□□□□ -1.02
Ptch1-201ENSMUST00000021921 Celsr3Q91ZI0 3301 aa8.66□□□□□ -1.02
Ptch1-201ENSMUST00000021921 Sprr1aQ62266 144 aa8.62□□□□□ -1.03
Ptch1-201ENSMUST00000021921 Gm9507D3Z5T3 223 aa8.62□□□□□ -1.03
Ptch1-201ENSMUST00000021921 Vps13aQ5H8C4 3166 aa8.6□□□□□ -1.03
Ptch1-201ENSMUST00000021921 Gm7173A0A0G2JEB6 3132 aa8.59□□□□□ -1.03
Ptch1-201ENSMUST00000021921 Col12a1Q60847 3120 aa8.58□□□□□ -1.04
Ptch1-201ENSMUST00000021921 Tep1P97499 2629 aa8.58□□□□□ -1.04
Ptch1-201ENSMUST00000021921 Szt2A2A9C3 3431 aa8.58□□□□□ -1.04
Ptch1-201ENSMUST00000021921 Unc80Q8BLN6 3261 aa8.57□□□□□ -1.04
Ptch1-201ENSMUST00000021921 Krtap10-4Q08EG8 221 aa8.57□□□□□ -1.04
Ptch1-201ENSMUST00000021921 BptfA2A654 3036 aaKnown RBP8.56□□□□□ -1.04
Ptch1-201ENSMUST00000021921 AtmQ62388 3066 aa8.55□□□□□ -1.04
Ptch1-201ENSMUST00000021921 Gcn1E9PVA8 2671 aaKnown RBP8.55□□□□□ -1.04
Ptch1-201ENSMUST00000021921 2310057N15RikQ9D6T8 200 aa8.54□□□□□ -1.04
Ptch1-201ENSMUST00000021921 Cystm1Q8K353 104 aa8.53□□□□□ -1.04
Ptch1-201ENSMUST00000021921 Igsf10Q3V1M1 2594 aa8.53□□□□□ -1.04
Ptch1-201ENSMUST00000021921 Itpr3P70227 2670 aa8.52□□□□□ -1.04
Ptch1-201ENSMUST00000021921 Lelp1Q9DAE3 120 aa8.51□□□□□ -1.05
Ptch1-201ENSMUST00000021921 CenpfE9Q3P4 2997 aaKnown RBP8.51□□□□□ -1.05
Ptch1-201ENSMUST00000021921 Tnp2P11378 117 aa8.51□□□□□ -1.05
Ptch1-201ENSMUST00000021921 Dmxl2Q8BPN8 3032 aa8.49□□□□□ -1.05
Ptch1-201ENSMUST00000021921 Cox6b2Q80ZN9 88 aa8.49□□□□□ -1.05
Ptch1-201ENSMUST00000021921 Col6a3E9PWQ3 3284 aa8.49□□□□□ -1.05
Ptch1-201ENSMUST00000021921 Krtap10-10A0A1W2P7T6 217 aa8.47□□□□□ -1.05
Ptch1-201ENSMUST00000021921 KalrnA2CG49 2964 aa8.47□□□□□ -1.05
Ptch1-201ENSMUST00000021921 Zfhx3Q61329 3726 aa8.45□□□□□ -1.06
Ptch1-201ENSMUST00000021921 Frem2Q6NVD0 3160 aa8.44□□□□□ -1.06
Ptch1-201ENSMUST00000021921 Cfap54Q8C6S9 3106 aa8.42□□□□□ -1.06
Ptch1-201ENSMUST00000021921 Gm2310J3QNJ2 377 aa8.42□□□□□ -1.06
Ptch1-201ENSMUST00000021921 Mast4Q811L6 2618 aa8.42□□□□□ -1.06
Ptch1-201ENSMUST00000021921 Stab2Q8R4U0 2559 aa8.41□□□□□ -1.06
Ptch1-201ENSMUST00000021921 1700042G07RikB1AUF7 90 aa8.39□□□□□ -1.07
Ptch1-201ENSMUST00000021921 4933415A04RikQ9D443 101 aa8.38□□□□□ -1.07
Ptch1-201ENSMUST00000021921 Brca2P97929 3329 aa8.36□□□□□ -1.07
Ptch1-201ENSMUST00000021921 A730071L15RikQ8C4X0 137 aa8.35□□□□□ -1.07
Ptch1-201ENSMUST00000021921 Gm5965D3Z724 196 aa8.35□□□□□ -1.07
Ptch1-201ENSMUST00000021921 Dmxl1Q6PNC0 3013 aa8.34□□□□□ -1.08
Ptch1-201ENSMUST00000021921 ApcQ61315 2845 aa8.31□□□□□ -1.08
Ptch1-201ENSMUST00000021921 Wdfy4E9Q2M9 3149 aa8.31□□□□□ -1.08
Ptch1-201ENSMUST00000021921 Nbeal2Q6ZQA0 2742 aa8.3□□□□□ -1.08
Ptch1-201ENSMUST00000021921 Rev3lQ61493 3122 aa8.29□□□□□ -1.08
Ptch1-201ENSMUST00000021921 Tnrc18Q80WC3 2878 aa8.29□□□□□ -1.08
Ptch1-201ENSMUST00000021921 Krtap14O08640 167 aa8.28□□□□□ -1.08
Ptch1-201ENSMUST00000021921 Gm9918Q8BUR5 174 aa8.27□□□□□ -1.09
Ptch1-201ENSMUST00000021921 MgaA2AWL7 3003 aaKnown RBP8.26□□□□□ -1.09
Ptch1-201ENSMUST00000021921 DspE9Q557 2883 aaKnown RBP8.23□□□□□ -1.09
Ptch1-201ENSMUST00000021921 Itpr2Q9Z329 2701 aa8.22□□□□□ -1.09
Ptch1-201ENSMUST00000021921 Myo15aQ9QZZ4 3511 aa8.22□□□□□ -1.09
Ptch1-201ENSMUST00000021921 Lama1P19137 3084 aa8.21□□□□□ -1.09
Ptch1-201ENSMUST00000021921 Ubr5Q80TP3 2792 aa8.21□□□□□ -1.1
Ptch1-201ENSMUST00000021921 VcanQ62059 3357 aa8.2□□□□□ -1.1
Ptch1-201ENSMUST00000021921 Gm2696A0A1W2P709 240 aa8.19□□□□□ -1.1
Ptch1-201ENSMUST00000021921 FryE9Q8I9 3020 aa8.18□□□□□ -1.1
Ptch1-201ENSMUST00000021921 Myo15bI7HPW8 3033 aa8.18□□□□□ -1.1
Ptch1-201ENSMUST00000021921 Chd6A3KFM7 2711 aa8.17□□□□□ -1.1
Ptch1-201ENSMUST00000021921 Dchs2A0A0A6YW72 3346 aa8.17□□□□□ -1.1
Ptch1-201ENSMUST00000021921 Dchs1E9PVD3 3291 aa8.15□□□□□ -1.1
Ptch1-201ENSMUST00000021921 AspmQ8CJ27 3122 aa8.15□□□□□ -1.1
Ptch1-201ENSMUST00000021921 Wdfy3Q6VNB8 3508 aa8.15□□□□□ -1.1
Ptch1-201ENSMUST00000021921 Rps29P62274 56 aa8.13□□□□□ -1.11
Ptch1-201ENSMUST00000021921 Lrrc37aB1AWG4 3215 aa8.13□□□□□ -1.11
Ptch1-201ENSMUST00000021921 Pkd1l1Q8R526 2615 aa8.11□□□□□ -1.11
Retrieved 100 of 22,080 RNA–protein pairs in 80.8 ms