RNA–Protein interactions for RNA: ENSMUST00000020441.12

Vps13d-201, Transcript of Vacuolar protein sorting 13D, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Vps13d, Length 15,665 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13d-201ENSMUST00000020441 Itpr1P11881 2749 aa3.42□□□□□ -1.86
Vps13d-201ENSMUST00000020441 Pla2g10Q9QXX3 151 aa3.42□□□□□ -1.86
Vps13d-201ENSMUST00000020441 Gm16253D3Z167 63 aa3.42□□□□□ -1.86
Vps13d-201ENSMUST00000020441 6030445D17RikE9Q8F9 148 aa3.42□□□□□ -1.86
Vps13d-201ENSMUST00000020441 Smim29Q8R043 75 aa3.41□□□□□ -1.86
Vps13d-201ENSMUST00000020441 Anapc11Q9CPX9 84 aa3.41□□□□□ -1.86
Vps13d-201ENSMUST00000020441 Krtap29-1A2A5X4 342 aa3.41□□□□□ -1.86
Vps13d-201ENSMUST00000020441 Fam229aB2KGE5 128 aa3.41□□□□□ -1.86
Vps13d-201ENSMUST00000020441 Itpr3P70227 2670 aa3.41□□□□□ -1.86
Vps13d-201ENSMUST00000020441 Gm4491E0CX42 125 aa3.4□□□□□ -1.86
Vps13d-201ENSMUST00000020441 Sec61bQ9CQS8 96 aaKnown RBP3.4□□□□□ -1.87
Vps13d-201ENSMUST00000020441 Rps29P62274 56 aa3.39□□□□□ -1.87
Vps13d-201ENSMUST00000020441 Gm37013Q8K491 104 aa3.39□□□□□ -1.87
Vps13d-201ENSMUST00000020441 Col6a5A6H584 2640 aa3.39□□□□□ -1.87
Vps13d-201ENSMUST00000020441 Fam229bQ8CF36 80 aa3.38□□□□□ -1.87
Vps13d-201ENSMUST00000020441 A730071L15RikQ8C4X0 137 aa3.37□□□□□ -1.87
Vps13d-201ENSMUST00000020441 9530053A07RikE9PVG8 2581 aa3.37□□□□□ -1.87
Vps13d-201ENSMUST00000020441 Lama3Q61789 3330 aa3.36□□□□□ -1.87
Vps13d-201ENSMUST00000020441 Stab2Q8R4U0 2559 aa3.36□□□□□ -1.87
Vps13d-201ENSMUST00000020441 Dmxl1Q6PNC0 3013 aa3.36□□□□□ -1.87
Vps13d-201ENSMUST00000020441 Gm10320E9PW43 113 aa3.35□□□□□ -1.87
Vps13d-201ENSMUST00000020441 Gm3250E9Q1M3 230 aa3.35□□□□□ -1.87
Vps13d-201ENSMUST00000020441 Spink7Q6IE32 76 aa3.33□□□□□ -1.88
Vps13d-201ENSMUST00000020441 Itpr2Q9Z329 2701 aa3.32□□□□□ -1.88
Vps13d-201ENSMUST00000020441 Myo15bI7HPW8 3033 aa3.32□□□□□ -1.88
Vps13d-201ENSMUST00000020441 Pkd1l1Q8R526 2615 aa3.31□□□□□ -1.88
Vps13d-201ENSMUST00000020441 Romo1P60603 79 aa3.31□□□□□ -1.88
Vps13d-201ENSMUST00000020441 BC029722A0A0N4SW31 51 aa3.31□□□□□ -1.88
Vps13d-201ENSMUST00000020441 MgaA2AWL7 3003 aaKnown RBP3.3□□□□□ -1.88
Vps13d-201ENSMUST00000020441 Rpl37Q9D823 97 aa3.3□□□□□ -1.88
Vps13d-201ENSMUST00000020441 Gm5767A0A0J9YTU8 78 aa3.3□□□□□ -1.88
Vps13d-201ENSMUST00000020441 Lelp1Q9DAE3 120 aa3.3□□□□□ -1.88
Vps13d-201ENSMUST00000020441 Cox6b2Q80ZN9 88 aa3.3□□□□□ -1.88
Vps13d-201ENSMUST00000020441 Lama2Q60675 3118 aaKnown RBP3.3□□□□□ -1.88
Vps13d-201ENSMUST00000020441 Muc2Q80Z19 2680 aa3.3□□□□□ -1.88
Vps13d-201ENSMUST00000020441 Chd7A2AJK6 2986 aaKnown RBP3.29□□□□□ -1.88
Vps13d-201ENSMUST00000020441 Camk2n1Q6QWF9 78 aa3.29□□□□□ -1.88
Vps13d-201ENSMUST00000020441 Gm3880A0A1B0GSB3 72 aa3.28□□□□□ -1.88
Vps13d-201ENSMUST00000020441 Cystm1Q8K353 104 aa3.28□□□□□ -1.88
Vps13d-201ENSMUST00000020441 Unc80Q8BLN6 3261 aa3.28□□□□□ -1.88
Vps13d-201ENSMUST00000020441 Fbn2Q61555 2907 aa3.28□□□□□ -1.88
Vps13d-201ENSMUST00000020441 TrioQ0KL02 3102 aa3.27□□□□□ -1.89
Vps13d-201ENSMUST00000020441 SmcpP15265 143 aa3.27□□□□□ -1.89
Vps13d-201ENSMUST00000020441 Gm17349F7BGH6 99 aa3.27□□□□□ -1.89
Vps13d-201ENSMUST00000020441 Cdh23Q99PF4 3354 aa3.26□□□□□ -1.89
Vps13d-201ENSMUST00000020441 Gm7173A0A0G2JEB6 3132 aa3.25□□□□□ -1.89
Vps13d-201ENSMUST00000020441 Ubr5Q80TP3 2792 aa3.25□□□□□ -1.89
Vps13d-201ENSMUST00000020441 Mki67E9PVX6 3177 aaKnown RBP3.25□□□□□ -1.89
Vps13d-201ENSMUST00000020441 4933415A04RikQ9D443 101 aa3.25□□□□□ -1.89
Vps13d-201ENSMUST00000020441 Gm3646F6S692 53 aa3.25□□□□□ -1.89
Vps13d-201ENSMUST00000020441 Ash1lQ99MY8 2958 aa3.24□□□□□ -1.89
Vps13d-201ENSMUST00000020441 Rev3lQ61493 3122 aa3.24□□□□□ -1.89
Vps13d-201ENSMUST00000020441 Gm2310J3QNJ2 377 aa3.23□□□□□ -1.89
Vps13d-201ENSMUST00000020441 Krtap15-1Q9QZU5 150 aa3.23□□□□□ -1.89
Vps13d-201ENSMUST00000020441 Nbeal2Q6ZQA0 2742 aa3.22□□□□□ -1.89
Vps13d-201ENSMUST00000020441 Tnp2P11378 117 aa3.21□□□□□ -1.9
Vps13d-201ENSMUST00000020441 1700042G07RikB1AUF7 90 aa3.21□□□□□ -1.9
Vps13d-201ENSMUST00000020441 FcgbpE9Q0B5 2583 aa3.21□□□□□ -1.9
Vps13d-201ENSMUST00000020441 Tex15F8VPN2 2785 aa3.21□□□□□ -1.9
Vps13d-201ENSMUST00000020441 KalrnA2CG49 2964 aa3.2□□□□□ -1.9
Vps13d-201ENSMUST00000020441 Gm3233E9Q2H5 230 aa3.2□□□□□ -1.9
Vps13d-201ENSMUST00000020441 Utp20Q5XG71 2788 aaKnown RBP3.2□□□□□ -1.9
Vps13d-201ENSMUST00000020441 Gm19426M0QWC7 77 aa3.2□□□□□ -1.9
Vps13d-201ENSMUST00000020441 Gm10382Q3V0T5 144 aa3.19□□□□□ -1.9
Vps13d-201ENSMUST00000020441 Cfap54Q8C6S9 3106 aa3.19□□□□□ -1.9
Vps13d-201ENSMUST00000020441 ApcQ61315 2845 aa3.19□□□□□ -1.9
Vps13d-201ENSMUST00000020441 Col12a1Q60847 3120 aa3.19□□□□□ -1.9
Vps13d-201ENSMUST00000020441 2310050C09RikG5E8Z3 280 aa3.18□□□□□ -1.9
Vps13d-201ENSMUST00000020441 Gm40193A0A1B0GT39 78 aa3.18□□□□□ -1.9
Vps13d-201ENSMUST00000020441 Vps13cQ8BX70 3748 aa3.18□□□□□ -1.9
Vps13d-201ENSMUST00000020441 Hivep1Q03172 2688 aa3.17□□□□□ -1.9
Vps13d-201ENSMUST00000020441 Vps13aQ5H8C4 3166 aa3.16□□□□□ -1.9
Vps13d-201ENSMUST00000020441 2310061N02RikQ9D6S9 174 aa3.16□□□□□ -1.9
Vps13d-201ENSMUST00000020441 FrylF8VQ05 3007 aa3.15□□□□□ -1.91
Vps13d-201ENSMUST00000020441 Gm7138L7N2C3 230 aa3.15□□□□□ -1.91
Vps13d-201ENSMUST00000020441 Gm3238W4VSP7 230 aa3.15□□□□□ -1.91
Vps13d-201ENSMUST00000020441 Srrm2Q8BTI8 2703 aaKnown RBP3.15□□□□□ -1.91
Vps13d-201ENSMUST00000020441 Krtap14O08640 167 aa3.14□□□□□ -1.91
Vps13d-201ENSMUST00000020441 Bod1lE9Q6J5 3032 aa3.14□□□□□ -1.91
Vps13d-201ENSMUST00000020441 TgO08710 2766 aa3.14□□□□□ -1.91
Vps13d-201ENSMUST00000020441 Ranbp2Q9ERU9 3053 aaKnown RBP3.13□□□□□ -1.91
Vps13d-201ENSMUST00000020441 AspmQ8CJ27 3122 aa3.12□□□□□ -1.91
Vps13d-201ENSMUST00000020441 HttP42859 3119 aa3.12□□□□□ -1.91
Vps13d-201ENSMUST00000020441 Igfn1Q3KNY0 2849 aa3.11□□□□□ -1.91
Vps13d-201ENSMUST00000020441 Pdzd2E9Q1M1 2796 aa3.1□□□□□ -1.91
Vps13d-201ENSMUST00000020441 D6Ertd527eA0A0N4SWI3 464 aa3.1□□□□□ -1.91
Vps13d-201ENSMUST00000020441 Gm21887J3QQ04 176 aa3.1□□□□□ -1.91
Vps13d-201ENSMUST00000020441 Akap9Q70FJ1 3797 aa3.09□□□□□ -1.91
Vps13d-201ENSMUST00000020441 Gm36176A0A1W2P8D5 158 aa3.09□□□□□ -1.92
Vps13d-201ENSMUST00000020441 Gm7137J3QMW1 236 aa3.07□□□□□ -1.92
Vps13d-201ENSMUST00000020441 BptfA2A654 3036 aaKnown RBP3.06□□□□□ -1.92
Vps13d-201ENSMUST00000020441 Krtap13O88375 197 aa3.06□□□□□ -1.92
Vps13d-201ENSMUST00000020441 Zzef1Q5SSH7 2924 aa3.06□□□□□ -1.92
Vps13d-201ENSMUST00000020441 Szt2A2A9C3 3431 aa3.06□□□□□ -1.92
Vps13d-201ENSMUST00000020441 Wdfy4E9Q2M9 3149 aa3.05□□□□□ -1.92
Vps13d-201ENSMUST00000020441 Zfhx3Q61329 3726 aa3.05□□□□□ -1.92
Vps13d-201ENSMUST00000020441 FlncQ8VHX6 2726 aaKnown RBP3.05□□□□□ -1.92
Vps13d-201ENSMUST00000020441 NbeaQ9EPN1 2936 aa3.04□□□□□ -1.92
Vps13d-201ENSMUST00000020441 Tnp1P10856 55 aa3.04□□□□□ -1.92
Vps13d-201ENSMUST00000020441 Tenm4Q3UHK6 2771 aa3.04□□□□□ -1.92
Retrieved 100 of 22,080 RNA–protein pairs in 44.9 ms