RNA–Protein interactions for RNA: ENSMUST00000075666.7

Upf1-201, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Upf1, Length 4,618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-201ENSMUST00000075666 Fam229bQ8CF36 80 aa12.75□□□□□ -0.37
Upf1-201ENSMUST00000075666 Rev3lQ61493 3122 aa12.74□□□□□ -0.37
Upf1-201ENSMUST00000075666 Sprr1bQ62267 153 aa12.74□□□□□ -0.37
Upf1-201ENSMUST00000075666 Igkv8-19A0A0G2JFN8 121 aa12.73□□□□□ -0.37
Upf1-201ENSMUST00000075666 AY074887Q8R5F9 132 aa12.72□□□□□ -0.37
Upf1-201ENSMUST00000075666 Ash1lQ99MY8 2958 aa12.72□□□□□ -0.37
Upf1-201ENSMUST00000075666 AI606181Q8C7B9 129 aa12.7□□□□□ -0.38
Upf1-201ENSMUST00000075666 Dmac1Q9CQ00 111 aa12.7□□□□□ -0.38
Upf1-201ENSMUST00000075666 PscaP57096 123 aa12.69□□□□□ -0.38
Upf1-201ENSMUST00000075666 C530025M09RikF6RGA8 229 aa12.69□□□□□ -0.38
Upf1-201ENSMUST00000075666 CnbpP53996 178 aaKnown RBP12.68□□□□□ -0.38
Upf1-201ENSMUST00000075666 E130208F15RikQ3UPV3 143 aa12.68□□□□□ -0.38
Upf1-201ENSMUST00000075666 Dmxl1Q6PNC0 3013 aa12.67□□□□□ -0.38
Upf1-201ENSMUST00000075666 Krtap11-1E9Q2E9 183 aa12.66□□□□□ -0.38
Upf1-201ENSMUST00000075666 Gm10160F6Y577 67 aa12.66□□□□□ -0.38
Upf1-201ENSMUST00000075666 Dmbt1Q60997 2085 aa12.66□□□□□ -0.38
Upf1-201ENSMUST00000075666 Nupr2Q497P3 102 aa12.65□□□□□ -0.38
Upf1-201ENSMUST00000075666 Coa5Q99M07 74 aa12.65□□□□□ -0.38
Upf1-201ENSMUST00000075666 Igkv3-12A0A140T8P0 119 aa12.65□□□□□ -0.38
Upf1-201ENSMUST00000075666 Gm11627A6PWP4 55 aa12.65□□□□□ -0.39
Upf1-201ENSMUST00000075666 A330070K13RikQ8CA53 115 aa12.65□□□□□ -0.39
Upf1-201ENSMUST00000075666 P84750 121 aa12.64□□□□□ -0.39
Upf1-201ENSMUST00000075666 Gm11213A0A1B0GR83 88 aa12.63□□□□□ -0.39
Upf1-201ENSMUST00000075666 Snhg11Q4G0K9 87 aa12.63□□□□□ -0.39
Upf1-201ENSMUST00000075666 Szt2A2A9C3 3431 aa12.63□□□□□ -0.39
Upf1-201ENSMUST00000075666 Wfdc6bF6ULY1 148 aa12.63□□□□□ -0.39
Upf1-201ENSMUST00000075666 Ccdc179J3QM76 67 aa12.63□□□□□ -0.39
Upf1-201ENSMUST00000075666 Cystm1Q8K353 104 aa12.63□□□□□ -0.39
Upf1-201ENSMUST00000075666 Bean1Q9EQG5 255 aa12.63□□□□□ -0.39
Upf1-201ENSMUST00000075666 Fbn2Q61555 2907 aa12.62□□□□□ -0.39
Upf1-201ENSMUST00000075666 Chchd10Q7TNL9 138 aa12.61□□□□□ -0.39
Upf1-201ENSMUST00000075666 Znf414Q9DCK4 299 aa12.61□□□□□ -0.39
Upf1-201ENSMUST00000075666 Ankrd17Q99NH0 2603 aaKnown RBP12.61□□□□□ -0.39
Upf1-201ENSMUST00000075666 AtmQ62388 3066 aa12.61□□□□□ -0.39
Upf1-201ENSMUST00000075666 FryE9Q8I9 3020 aa12.6□□□□□ -0.39
Upf1-201ENSMUST00000075666 Frem2Q6NVD0 3160 aa12.6□□□□□ -0.39
Upf1-201ENSMUST00000075666 Krtap24-1G3X9A2 248 aa12.59□□□□□ -0.39
Upf1-201ENSMUST00000075666 U90926O08546 118 aa12.59□□□□□ -0.39
Upf1-201ENSMUST00000075666 Znf706Q9D115 76 aaKnown RBP12.58□□□□□ -0.4
Upf1-201ENSMUST00000075666 Sprr4Q8CGN8 76 aa12.55□□□□□ -0.4
Upf1-201ENSMUST00000075666 MgaA2AWL7 3003 aaKnown RBP12.53□□□□□ -0.4
Upf1-201ENSMUST00000075666 Rpl37aP61514 92 aa12.53□□□□□ -0.4
Upf1-201ENSMUST00000075666 Igkv3-7A0A0G2JE31 119 aa12.52□□□□□ -0.4
Upf1-201ENSMUST00000075666 Celsr3Q91ZI0 3301 aa12.51□□□□□ -0.41
Upf1-201ENSMUST00000075666 Gm16181B0V2H2 73 aa12.51□□□□□ -0.41
Upf1-201ENSMUST00000075666 SmcpP15265 143 aa12.51□□□□□ -0.41
Upf1-201ENSMUST00000075666 KalrnA2CG49 2964 aa12.5□□□□□ -0.41
Upf1-201ENSMUST00000075666 Phxr4P15974 95 aa12.5□□□□□ -0.41
Upf1-201ENSMUST00000075666 Lelp1Q9DAE3 120 aa12.5□□□□□ -0.41
Upf1-201ENSMUST00000075666 Q8BT88 171 aa12.49□□□□□ -0.41
Upf1-201ENSMUST00000075666 Gm3250E9Q1M3 230 aa12.49□□□□□ -0.41
Upf1-201ENSMUST00000075666 Celsr1O35161 3034 aa12.48□□□□□ -0.41
Upf1-201ENSMUST00000075666 Gm10320E9PW43 113 aa12.48□□□□□ -0.41
Upf1-201ENSMUST00000075666 Prol1E9PYQ4 312 aa12.48□□□□□ -0.41
Upf1-201ENSMUST00000075666 Gm7276Q3TYW4 209 aa12.48□□□□□ -0.41
Upf1-201ENSMUST00000075666 Fam168bQ80XQ8 194 aa12.46□□□□□ -0.41
Upf1-201ENSMUST00000075666 Gm9195A0A140LHT4 2805 aa12.46□□□□□ -0.42
Upf1-201ENSMUST00000075666 A930002H24RikQ8C8Y3 163 aa12.44□□□□□ -0.42
Upf1-201ENSMUST00000075666 FlnaQ8BTM8 2647 aaKnown RBP12.44□□□□□ -0.42
Upf1-201ENSMUST00000075666 FrylF8VQ05 3007 aa12.44□□□□□ -0.42
Upf1-201ENSMUST00000075666 Wfdc3Q14AE4 130 aa12.43□□□□□ -0.42
Upf1-201ENSMUST00000075666 Gm20661K7N787 53 aa12.43□□□□□ -0.42
Upf1-201ENSMUST00000075666 Gm28374F6SG70 93 aa12.42□□□□□ -0.42
Upf1-201ENSMUST00000075666 Lrrc37aB1AWG4 3215 aa12.41□□□□□ -0.42
Upf1-201ENSMUST00000075666 Itpr1P11881 2749 aa12.4□□□□□ -0.42
Upf1-201ENSMUST00000075666 Limd2Q8BGB5 128 aa12.4□□□□□ -0.42
Upf1-201ENSMUST00000075666 HrnrQ8VHD8 2496 aa12.4□□□□□ -0.42
Upf1-201ENSMUST00000075666 Adm2Q7TNK8 150 aa12.39□□□□□ -0.43
Upf1-201ENSMUST00000075666 Gm4707V9GXN5 68 aa12.39□□□□□ -0.43
Upf1-201ENSMUST00000075666 AspmQ8CJ27 3122 aa12.39□□□□□ -0.43
Upf1-201ENSMUST00000075666 NipblQ6KCD5 2798 aaKnown RBP12.38□□□□□ -0.43
Upf1-201ENSMUST00000075666 Notch1Q01705 2531 aa12.38□□□□□ -0.43
Upf1-201ENSMUST00000075666 Lama1P19137 3084 aa12.35□□□□□ -0.43
Upf1-201ENSMUST00000075666 Ankrd11E9Q4F7 2643 aa12.34□□□□□ -0.43
Upf1-201ENSMUST00000075666 Phf5aP83870 110 aaKnown RBP12.34□□□□□ -0.43
Upf1-201ENSMUST00000075666 Wfdc17Q5SSJ1 76 aa12.33□□□□□ -0.44
Upf1-201ENSMUST00000075666 Gm10642Q3TWM1 71 aa12.33□□□□□ -0.44
Upf1-201ENSMUST00000075666 AplnQ9R0R4 77 aa12.28□□□□□ -0.44
Upf1-201ENSMUST00000075666 1600014C23RikQ9DAX4 101 aa12.28□□□□□ -0.44
Upf1-201ENSMUST00000075666 Smim29Q8R043 75 aa12.27□□□□□ -0.44
Upf1-201ENSMUST00000075666 Chtf8P0CG14 533 aa12.27□□□□□ -0.45
Upf1-201ENSMUST00000075666 Defb39Q70KL3 74 aa12.26□□□□□ -0.45
Upf1-201ENSMUST00000075666 Gm10643Q3URG9 111 aa12.26□□□□□ -0.45
Upf1-201ENSMUST00000075666 Fn1P11276 2477 aaKnown RBP12.23□□□□□ -0.45
Upf1-201ENSMUST00000075666 Myo15bI7HPW8 3033 aa12.23□□□□□ -0.45
Upf1-201ENSMUST00000075666 Gm10837Q3UTT8 145 aa12.23□□□□□ -0.45
Upf1-201ENSMUST00000075666 A730071L15RikQ8C4X0 137 aa12.22□□□□□ -0.45
Upf1-201ENSMUST00000075666 CicQ924A2 2510 aa12.21□□□□□ -0.46
Upf1-201ENSMUST00000075666 Gm10999F6Q4M4 69 aa12.19□□□□□ -0.46
Upf1-201ENSMUST00000075666 Usp24B1AY13 2617 aaKnown RBP12.19□□□□□ -0.46
Upf1-201ENSMUST00000075666 Kmt2bO08550 2713 aa12.18□□□□□ -0.46
Upf1-201ENSMUST00000075666 Dmxl2Q8BPN8 3032 aa12.18□□□□□ -0.46
Upf1-201ENSMUST00000075666 Nsd1O88491 2588 aaKnown RBP12.17□□□□□ -0.46
Upf1-201ENSMUST00000075666 FlnbQ80X90 2602 aaKnown RBP12.17□□□□□ -0.46
Upf1-201ENSMUST00000075666 BptfA2A654 3036 aaKnown RBP12.16□□□□□ -0.46
Upf1-201ENSMUST00000075666 Gm27235Q3UW50 83 aa12.16□□□□□ -0.46
Upf1-201ENSMUST00000075666 Chd6A3KFM7 2711 aa12.16□□□□□ -0.46
Upf1-201ENSMUST00000075666 AtrQ9JKK8 2635 aa12.16□□□□□ -0.46
Upf1-201ENSMUST00000075666 Brca2P97929 3329 aa12.16□□□□□ -0.46
Upf1-201ENSMUST00000075666 Gm11565A2A4M7 156 aa12.15□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 46.7 ms