RNA–Protein interactions for RNA: ENSMUST00000040111.9

Ttc28-201, Transcript of Tetratricopeptide repeat protein 28, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ttc28, Length 10,780 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28-201ENSMUST00000040111 Q9DAA7 145 aa6.11□□□□□ -1.43
Ttc28-201ENSMUST00000040111 Rps28P62858 69 aaKnown RBP6.1□□□□□ -1.43
Ttc28-201ENSMUST00000040111 Ighv8-13A0A075B5Y0 101 aa6.1□□□□□ -1.43
Ttc28-201ENSMUST00000040111 Chchd10Q7TNL9 138 aa6.1□□□□□ -1.43
Ttc28-201ENSMUST00000040111 1810062G17RikG3X8Y2 129 aa6.1□□□□□ -1.43
Ttc28-201ENSMUST00000040111 Defb45Q3V490 66 aa6.09□□□□□ -1.43
Ttc28-201ENSMUST00000040111 P01819 144 aa6.09□□□□□ -1.43
Ttc28-201ENSMUST00000040111 B430305J03RikQ8BQQ8 176 aa6.09□□□□□ -1.44
Ttc28-201ENSMUST00000040111 Igsf10Q3V1M1 2594 aa6.08□□□□□ -1.44
Ttc28-201ENSMUST00000040111 Igkv8-27A0A0G2JF28 120 aa6.08□□□□□ -1.44
Ttc28-201ENSMUST00000040111 CenpfE9Q3P4 2997 aaKnown RBP6.08□□□□□ -1.44
Ttc28-201ENSMUST00000040111 Krtap16-1A2A5X5 502 aa6.07□□□□□ -1.44
Ttc28-201ENSMUST00000040111 Odf3l2Q3TZ65 277 aa6.07□□□□□ -1.44
Ttc28-201ENSMUST00000040111 Cox6a2P43023 97 aa6.07□□□□□ -1.44
Ttc28-201ENSMUST00000040111 Msrb1Q9JLC3 116 aa6.07□□□□□ -1.44
Ttc28-201ENSMUST00000040111 Ighv2-5A0A0A6YY69 116 aa6.07□□□□□ -1.44
Ttc28-201ENSMUST00000040111 Gm5617Q91VN2 117 aa6.07□□□□□ -1.44
Ttc28-201ENSMUST00000040111 Tnrc18Q80WC3 2878 aa6.07□□□□□ -1.44
Ttc28-201ENSMUST00000040111 Ighv2-2A0A075B5P8 116 aa6.06□□□□□ -1.44
Ttc28-201ENSMUST00000040111 P01821 116 aa6.06□□□□□ -1.44
Ttc28-201ENSMUST00000040111 Lama2Q60675 3118 aaKnown RBP6.06□□□□□ -1.44
Ttc28-201ENSMUST00000040111 Znf414Q9DCK4 299 aa6.05□□□□□ -1.44
Ttc28-201ENSMUST00000040111 AplnQ9R0R4 77 aa6.05□□□□□ -1.44
Ttc28-201ENSMUST00000040111 AI854703Q8BIN3 203 aa6.03□□□□□ -1.44
Ttc28-201ENSMUST00000040111 Q9DAB9 146 aa6.03□□□□□ -1.44
Ttc28-201ENSMUST00000040111 Prune2Q52KR3 3084 aa6.03□□□□□ -1.44
Ttc28-201ENSMUST00000040111 Snhg11Q4G0K9 87 aa6.03□□□□□ -1.44
Ttc28-201ENSMUST00000040111 2310034G01RikA0A286YDL3 209 aa6.03□□□□□ -1.44
Ttc28-201ENSMUST00000040111 Stab2Q8R4U0 2559 aa6.03□□□□□ -1.44
Ttc28-201ENSMUST00000040111 Phf5aP83870 110 aaKnown RBP6.03□□□□□ -1.44
Ttc28-201ENSMUST00000040111 A930002H24RikQ8C8Y3 163 aa6.03□□□□□ -1.44
Ttc28-201ENSMUST00000040111 Fam168bQ80XQ8 194 aa6.02□□□□□ -1.45
Ttc28-201ENSMUST00000040111 Gm21886J3QJU9 214 aa6.01□□□□□ -1.45
Ttc28-201ENSMUST00000040111 Defb1P56386 69 aa6.01□□□□□ -1.45
Ttc28-201ENSMUST00000040111 Itpr3P70227 2670 aa6.01□□□□□ -1.45
Ttc28-201ENSMUST00000040111 Gm20538F6Z9R1 75 aa6.01□□□□□ -1.45
Ttc28-201ENSMUST00000040111 Gm36176A0A1W2P8D5 158 aa6.01□□□□□ -1.45
Ttc28-201ENSMUST00000040111 Lama3Q61789 3330 aa6.01□□□□□ -1.45
Ttc28-201ENSMUST00000040111 Gm9195A0A140LHT4 2805 aa6□□□□□ -1.45
Ttc28-201ENSMUST00000040111 Gm9508A0A1W2P7W0 230 aa6□□□□□ -1.45
Ttc28-201ENSMUST00000040111 Gm10999F6Q4M4 69 aa6□□□□□ -1.45
Ttc28-201ENSMUST00000040111 Defb11Q8R2I7 77 aa6□□□□□ -1.45
Ttc28-201ENSMUST00000040111 Itpr1P11881 2749 aa6□□□□□ -1.45
Ttc28-201ENSMUST00000040111 Gm17689B3GLJ4 109 aa6□□□□□ -1.45
Ttc28-201ENSMUST00000040111 Gm20661K7N787 53 aa6□□□□□ -1.45
Ttc28-201ENSMUST00000040111 Gm11627A6PWP4 55 aa6□□□□□ -1.45
Ttc28-201ENSMUST00000040111 Gm10643Q3URG9 111 aa5.99□□□□□ -1.45
Ttc28-201ENSMUST00000040111 Gm43218A0A0G2JGT0 114 aa5.99□□□□□ -1.45
Ttc28-201ENSMUST00000040111 Gm44790A0A0N4SV91 103 aa5.99□□□□□ -1.45
Ttc28-201ENSMUST00000040111 Krtap11-1E9Q2E9 183 aa5.99□□□□□ -1.45
Ttc28-201ENSMUST00000040111 Cdc42se1Q8BHL7 80 aa5.98□□□□□ -1.45
Ttc28-201ENSMUST00000040111 Spaca4Q80ZQ0 127 aa5.97□□□□□ -1.45
Ttc28-201ENSMUST00000040111 Gm10770F7D043 238 aa5.97□□□□□ -1.45
Ttc28-201ENSMUST00000040111 Bod1lE9Q6J5 3032 aa5.97□□□□□ -1.45
Ttc28-201ENSMUST00000040111 E130208F15RikQ3UPV3 143 aa5.97□□□□□ -1.45
Ttc28-201ENSMUST00000040111 Prol1E9PYQ4 312 aa5.96□□□□□ -1.45
Ttc28-201ENSMUST00000040111 7530416G11RikJ3QJX6 159 aa5.96□□□□□ -1.45
Ttc28-201ENSMUST00000040111 Defb50Q6TU36 73 aa5.96□□□□□ -1.45
Ttc28-201ENSMUST00000040111 Plac8Q9JI48 112 aa5.96□□□□□ -1.45
Ttc28-201ENSMUST00000040111 Pkd1l1Q8R526 2615 aa5.96□□□□□ -1.46
Ttc28-201ENSMUST00000040111 Dmac1Q9CQ00 111 aa5.96□□□□□ -1.46
Ttc28-201ENSMUST00000040111 Anapc11Q9CPX9 84 aa5.96□□□□□ -1.46
Ttc28-201ENSMUST00000040111 Rpl37aP61514 92 aa5.95□□□□□ -1.46
Ttc28-201ENSMUST00000040111 4930507D05RikQ8C9C9 103 aa5.95□□□□□ -1.46
Ttc28-201ENSMUST00000040111 3110070M22RikQ9DAQ7 118 aa5.95□□□□□ -1.46
Ttc28-201ENSMUST00000040111 Ranbp2Q9ERU9 3053 aaKnown RBP5.95□□□□□ -1.46
Ttc28-201ENSMUST00000040111 Ubr5Q80TP3 2792 aa5.95□□□□□ -1.46
Ttc28-201ENSMUST00000040111 AI606181Q8C7B9 129 aa5.94□□□□□ -1.46
Ttc28-201ENSMUST00000040111 Gpr15lA0A0B4J1N3 78 aa5.94□□□□□ -1.46
Ttc28-201ENSMUST00000040111 Gm10837Q3UTT8 145 aa5.94□□□□□ -1.46
Ttc28-201ENSMUST00000040111 Mki67E9PVX6 3177 aaKnown RBP5.94□□□□□ -1.46
Ttc28-201ENSMUST00000040111 Q8BGJ3 129 aa5.94□□□□□ -1.46
Ttc28-201ENSMUST00000040111 Coa5Q99M07 74 aa5.93□□□□□ -1.46
Ttc28-201ENSMUST00000040111 Elof1P60003 83 aa5.93□□□□□ -1.46
Ttc28-201ENSMUST00000040111 CrygaP04345 174 aa5.93□□□□□ -1.46
Ttc28-201ENSMUST00000040111 Utp20Q5XG71 2788 aaKnown RBP5.93□□□□□ -1.46
Ttc28-201ENSMUST00000040111 Rnase13Q5GAM7 153 aa5.92□□□□□ -1.46
Ttc28-201ENSMUST00000040111 Gm10308Q9CVR5 141 aa5.9□□□□□ -1.46
Ttc28-201ENSMUST00000040111 Gm16181B0V2H2 73 aa5.9□□□□□ -1.47
Ttc28-201ENSMUST00000040111 Phxr5P08399 672 aa5.9□□□□□ -1.47
Ttc28-201ENSMUST00000040111 Uqcr11Q9CPX8 56 aa5.89□□□□□ -1.47
Ttc28-201ENSMUST00000040111 Eif4ebp3Q80VV3 101 aa5.89□□□□□ -1.47
Ttc28-201ENSMUST00000040111 Gm10772F7AIG4 85 aa5.89□□□□□ -1.47
Ttc28-201ENSMUST00000040111 Gm9903Q8C9Y8 129 aa5.89□□□□□ -1.47
Ttc28-201ENSMUST00000040111 Gm7173A0A0G2JEB6 3132 aa5.88□□□□□ -1.47
Ttc28-201ENSMUST00000040111 MobpQ9D2P8 170 aa5.88□□□□□ -1.47
Ttc28-201ENSMUST00000040111 HttP42859 3119 aa5.88□□□□□ -1.47
Ttc28-201ENSMUST00000040111 NipblQ6KCD5 2798 aaKnown RBP5.88□□□□□ -1.47
Ttc28-201ENSMUST00000040111 Spata3Q9D9T6 193 aa5.87□□□□□ -1.47
Ttc28-201ENSMUST00000040111 Phxr4P15974 95 aa5.87□□□□□ -1.47
Ttc28-201ENSMUST00000040111 Lypd5Q9D7Z7 256 aa5.86□□□□□ -1.47
Ttc28-201ENSMUST00000040111 Itpr2Q9Z329 2701 aa5.86□□□□□ -1.47
Ttc28-201ENSMUST00000040111 Nbeal2Q6ZQA0 2742 aa5.86□□□□□ -1.47
Ttc28-201ENSMUST00000040111 Chd7A2AJK6 2986 aaKnown RBP5.86□□□□□ -1.47
Ttc28-201ENSMUST00000040111 Q8BT88 171 aa5.86□□□□□ -1.47
Ttc28-201ENSMUST00000040111 Cfap54Q8C6S9 3106 aa5.84□□□□□ -1.47
Ttc28-201ENSMUST00000040111 Gm27235Q3UW50 83 aa5.84□□□□□ -1.47
Ttc28-201ENSMUST00000040111 Vps13aQ5H8C4 3166 aa5.84□□□□□ -1.48
Ttc28-201ENSMUST00000040111 Fbn2Q61555 2907 aa5.83□□□□□ -1.48
Ttc28-201ENSMUST00000040111 Col12a1Q60847 3120 aa5.83□□□□□ -1.48
Retrieved 100 of 22,080 RNA–protein pairs in 84.3 ms