RNA–Protein interactions for RNA: ENSMUST00000026740.5

Col7a1-201, Transcript of Collagen alpha-1(VII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col7a1, Length 9,198 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1-201ENSMUST00000026740 Defb11Q8R2I7 77 aa10.07□□□□□ -0.8
Col7a1-201ENSMUST00000026740 Defb2P82020 71 aa10.07□□□□□ -0.8
Col7a1-201ENSMUST00000026740 Prr9Q8BV84 116 aa10.03□□□□□ -0.8
Col7a1-201ENSMUST00000026740 Cdc42se1Q8BHL7 80 aa10.03□□□□□ -0.8
Col7a1-201ENSMUST00000026740 Gm26661M0QWV4 156 aa10.03□□□□□ -0.8
Col7a1-201ENSMUST00000026740 Gm10642Q3TWM1 71 aa10.02□□□□□ -0.8
Col7a1-201ENSMUST00000026740 1700018G05RikA0A1B0GSI2 66 aa10.02□□□□□ -0.81
Col7a1-201ENSMUST00000026740 Wisp2Q9Z0G4 251 aa10.02□□□□□ -0.81
Col7a1-201ENSMUST00000026740 Notch1Q01705 2531 aa10.01□□□□□ -0.81
Col7a1-201ENSMUST00000026740 PcntP48725 2898 aa10.01□□□□□ -0.81
Col7a1-201ENSMUST00000026740 Gm10308Q9CVR5 141 aa10.01□□□□□ -0.81
Col7a1-201ENSMUST00000026740 Bri3P28662 125 aa10□□□□□ -0.81
Col7a1-201ENSMUST00000026740 AtrQ9JKK8 2635 aa10□□□□□ -0.81
Col7a1-201ENSMUST00000026740 Gm27235Q3UW50 83 aa9.99□□□□□ -0.81
Col7a1-201ENSMUST00000026740 FlnaQ8BTM8 2647 aaKnown RBP9.99□□□□□ -0.81
Col7a1-201ENSMUST00000026740 Gcn1E9PVA8 2671 aaKnown RBP9.99□□□□□ -0.81
Col7a1-201ENSMUST00000026740 Gpr15lA0A0B4J1N3 78 aa9.95□□□□□ -0.82
Col7a1-201ENSMUST00000026740 FlnbQ80X90 2602 aaKnown RBP9.95□□□□□ -0.82
Col7a1-201ENSMUST00000026740 AW011738F6S7Q2 159 aa9.94□□□□□ -0.82
Col7a1-201ENSMUST00000026740 Map1aQ9QYR6 2776 aa9.93□□□□□ -0.82
Col7a1-201ENSMUST00000026740 Defb37Q7TMD2 62 aa9.92□□□□□ -0.82
Col7a1-201ENSMUST00000026740 Rpl37aP61514 92 aa9.92□□□□□ -0.82
Col7a1-201ENSMUST00000026740 Gm44790A0A0N4SV91 103 aa9.92□□□□□ -0.82
Col7a1-201ENSMUST00000026740 MobpQ9D2P8 170 aa9.91□□□□□ -0.82
Col7a1-201ENSMUST00000026740 E130208F15RikQ3UPV3 143 aa9.9□□□□□ -0.82
Col7a1-201ENSMUST00000026740 Phxr4P15974 95 aa9.89□□□□□ -0.83
Col7a1-201ENSMUST00000026740 CriptO70333 101 aa9.88□□□□□ -0.83
Col7a1-201ENSMUST00000026740 Gm10770F7D043 238 aa9.88□□□□□ -0.83
Col7a1-201ENSMUST00000026740 Coa5Q99M07 74 aa9.88□□□□□ -0.83
Col7a1-201ENSMUST00000026740 Rnase13Q5GAM7 153 aa9.88□□□□□ -0.83
Col7a1-201ENSMUST00000026740 Pla2g10Q9QXX3 151 aa9.87□□□□□ -0.83
Col7a1-201ENSMUST00000026740 Srsf12Q8C8K3 266 aa9.87□□□□□ -0.83
Col7a1-201ENSMUST00000026740 Zfp292Q9Z2U2 2698 aa9.86□□□□□ -0.83
Col7a1-201ENSMUST00000026740 Hectd1Q69ZR2 2618 aaKnown RBP9.85□□□□□ -0.83
Col7a1-201ENSMUST00000026740 Nsd1O88491 2588 aaKnown RBP9.85□□□□□ -0.83
Col7a1-201ENSMUST00000026740 Spaca4Q80ZQ0 127 aa9.82□□□□□ -0.84
Col7a1-201ENSMUST00000026740 Spata3Q9D9T6 193 aa9.79□□□□□ -0.84
Col7a1-201ENSMUST00000026740 Gm10300Q8C8P7 189 aa9.79□□□□□ -0.84
Col7a1-201ENSMUST00000026740 Defb1P56386 69 aa9.78□□□□□ -0.84
Col7a1-201ENSMUST00000026740 Snhg11Q4G0K9 87 aa9.77□□□□□ -0.84
Col7a1-201ENSMUST00000026740 Q8BT88 171 aa9.77□□□□□ -0.85
Col7a1-201ENSMUST00000026740 Phf5aP83870 110 aaKnown RBP9.76□□□□□ -0.85
Col7a1-201ENSMUST00000026740 Krtap26-1Q9D7N2 215 aa9.76□□□□□ -0.85
Col7a1-201ENSMUST00000026740 9530053A07RikE9PVG8 2581 aa9.76□□□□□ -0.85
Col7a1-201ENSMUST00000026740 AI854703Q8BIN3 203 aa9.74□□□□□ -0.85
Col7a1-201ENSMUST00000026740 Gm9195A0A140LHT4 2805 aa9.74□□□□□ -0.85
Col7a1-201ENSMUST00000026740 Gm7276Q3TYW4 209 aa9.73□□□□□ -0.85
Col7a1-201ENSMUST00000026740 7530416G11RikJ3QJX6 159 aa9.72□□□□□ -0.85
Col7a1-201ENSMUST00000026740 Mast4Q811L6 2618 aa9.72□□□□□ -0.85
Col7a1-201ENSMUST00000026740 Gm11213A0A1B0GR83 88 aa9.67□□□□□ -0.86
Col7a1-201ENSMUST00000026740 Cypt15B1AXS0 87 aa9.66□□□□□ -0.86
Col7a1-201ENSMUST00000026740 Phxr5P08399 672 aa9.64□□□□□ -0.87
Col7a1-201ENSMUST00000026740 Gm10772F7AIG4 85 aa9.64□□□□□ -0.87
Col7a1-201ENSMUST00000026740 Sprr4Q8CGN8 76 aa9.64□□□□□ -0.87
Col7a1-201ENSMUST00000026740 Gm26620Q9CY65 116 aa9.63□□□□□ -0.87
Col7a1-201ENSMUST00000026740 Lypd5Q9D7Z7 256 aa9.63□□□□□ -0.87
Col7a1-201ENSMUST00000026740 Krtap24-1G3X9A2 248 aa9.61□□□□□ -0.87
Col7a1-201ENSMUST00000026740 Chd6A3KFM7 2711 aa9.61□□□□□ -0.87
Col7a1-201ENSMUST00000026740 Prr13Q9CQJ5 137 aa9.59□□□□□ -0.87
Col7a1-201ENSMUST00000026740 Tep1P97499 2629 aa9.58□□□□□ -0.88
Col7a1-201ENSMUST00000026740 Gm21798J3QNU5 87 aa9.58□□□□□ -0.88
Col7a1-201ENSMUST00000026740 AY074887Q8R5F9 132 aa9.57□□□□□ -0.88
Col7a1-201ENSMUST00000026740 Sprr1bQ62267 153 aa9.57□□□□□ -0.88
Col7a1-201ENSMUST00000026740 Fam168bQ80XQ8 194 aa9.57□□□□□ -0.88
Col7a1-201ENSMUST00000026740 Gm9955Q8CEJ8 102 aa9.56□□□□□ -0.88
Col7a1-201ENSMUST00000026740 Gm5617Q91VN2 117 aa9.56□□□□□ -0.88
Col7a1-201ENSMUST00000026740 Eif4ebp3Q80VV3 101 aa9.53□□□□□ -0.88
Col7a1-201ENSMUST00000026740 Gm9821Q8K076 103 aa9.52□□□□□ -0.88
Col7a1-201ENSMUST00000026740 Gm42715A0A087WP63 3095 aaKnown RBP9.52□□□□□ -0.89
Col7a1-201ENSMUST00000026740 SrcapA0A087WQ44 3271 aa9.5□□□□□ -0.89
Col7a1-201ENSMUST00000026740 Dnah12Q3V0Q1 3086 aa9.48□□□□□ -0.89
Col7a1-201ENSMUST00000026740 CnbpP53996 178 aaKnown RBP9.47□□□□□ -0.89
Col7a1-201ENSMUST00000026740 OxtP35454 125 aa9.46□□□□□ -0.89
Col7a1-201ENSMUST00000026740 2310034C09RikQ9D746 214 aa9.46□□□□□ -0.9
Col7a1-201ENSMUST00000026740 Igsf10Q3V1M1 2594 aa9.45□□□□□ -0.9
Col7a1-201ENSMUST00000026740 Golgb1E9PVZ8 3238 aa9.45□□□□□ -0.9
Col7a1-201ENSMUST00000026740 Col6a5A6H584 2640 aa9.44□□□□□ -0.9
Col7a1-201ENSMUST00000026740 Zcchc13Q9D548 170 aa9.43□□□□□ -0.9
Col7a1-201ENSMUST00000026740 Chtf8P0CG14 533 aa9.42□□□□□ -0.9
Col7a1-201ENSMUST00000026740 Krtap11-1E9Q2E9 183 aa9.42□□□□□ -0.9
Col7a1-201ENSMUST00000026740 1810062G17RikG3X8Y2 129 aa9.4□□□□□ -0.9
Col7a1-201ENSMUST00000026740 NipblQ6KCD5 2798 aaKnown RBP9.4□□□□□ -0.91
Col7a1-201ENSMUST00000026740 Spink7Q6IE32 76 aa9.39□□□□□ -0.91
Col7a1-201ENSMUST00000026740 Fam104aA2A6P4 185 aa9.38□□□□□ -0.91
Col7a1-201ENSMUST00000026740 Tnrc18Q80WC3 2878 aa9.37□□□□□ -0.91
Col7a1-201ENSMUST00000026740 Itpr3P70227 2670 aa9.36□□□□□ -0.91
Col7a1-201ENSMUST00000026740 Defb9Q8R2I6 67 aa9.34□□□□□ -0.91
Col7a1-201ENSMUST00000026740 A330070K13RikQ8CA53 115 aa9.33□□□□□ -0.92
Col7a1-201ENSMUST00000026740 Itpr1P11881 2749 aa9.33□□□□□ -0.92
Col7a1-201ENSMUST00000026740 Stab2Q8R4U0 2559 aa9.32□□□□□ -0.92
Col7a1-201ENSMUST00000026740 Cypt14J3QPF7 87 aa9.31□□□□□ -0.92
Col7a1-201ENSMUST00000026740 Pkd1l1Q8R526 2615 aa9.3□□□□□ -0.92
Col7a1-201ENSMUST00000026740 CenpfE9Q3P4 2997 aaKnown RBP9.29□□□□□ -0.92
Col7a1-201ENSMUST00000026740 Jbts17Q8CE72 3214 aa9.27□□□□□ -0.93
Col7a1-201ENSMUST00000026740 Gm10065F6TJM2 114 aa9.25□□□□□ -0.93
Col7a1-201ENSMUST00000026740 Ep400Q8CHI8 3072 aaKnown RBP9.24□□□□□ -0.93
Col7a1-201ENSMUST00000026740 Gm3880A0A1B0GSB3 72 aa9.21□□□□□ -0.93
Col7a1-201ENSMUST00000026740 C530025M09RikF6RGA8 229 aa9.21□□□□□ -0.94
Col7a1-201ENSMUST00000026740 Itpr2Q9Z329 2701 aa9.2□□□□□ -0.94
Col7a1-201ENSMUST00000026740 Camk2n1Q6QWF9 78 aa9.19□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 87 ms