RNA–Protein interactions for RNA: ENSMUST00000160721.7

Pcdh1-203, Transcript of Protocadherin 1 (Fragment), mousemouse

TSL 5 BASIC

Gene Pcdh1, Length 5,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-203ENSMUST00000160721 Q8K1L6 76 aa11.48□□□□□ -0.57
Pcdh1-203ENSMUST00000160721 Psmb11Q8BG41 302 aa11.48□□□□□ -0.57
Pcdh1-203ENSMUST00000160721 4930556J24RikQ9D4U7 146 aa11.48□□□□□ -0.57
Pcdh1-203ENSMUST00000160721 D730001G18RikA0A087WQU7 115 aa11.48□□□□□ -0.57
Pcdh1-203ENSMUST00000160721 4930432M17RikQ3V0W9 174 aa11.48□□□□□ -0.57
Pcdh1-203ENSMUST00000160721 Wfdc3Q14AE4 130 aa11.46□□□□□ -0.57
Pcdh1-203ENSMUST00000160721 Col5a1O88207 1838 aa11.46□□□□□ -0.57
Pcdh1-203ENSMUST00000160721 Sprr2jO70561 109 aa11.46□□□□□ -0.57
Pcdh1-203ENSMUST00000160721 Gm10845Q3UNY9 185 aa11.45□□□□□ -0.58
Pcdh1-203ENSMUST00000160721 Cd164l2Q9D6W7 172 aa11.45□□□□□ -0.58
Pcdh1-203ENSMUST00000160721 SnurfQ9WU12 71 aa11.45□□□□□ -0.58
Pcdh1-203ENSMUST00000160721 Rtl10D3YWW5 146 aa11.45□□□□□ -0.58
Pcdh1-203ENSMUST00000160721 Usp34Q6ZQ93 3582 aa11.44□□□□□ -0.58
Pcdh1-203ENSMUST00000160721 Ighv2-9-1A0A075B697 116 aa11.44□□□□□ -0.58
Pcdh1-203ENSMUST00000160721 Igkv3-7A0A0G2JE31 119 aa11.42□□□□□ -0.58
Pcdh1-203ENSMUST00000160721 Znf706Q9D115 76 aaKnown RBP11.42□□□□□ -0.58
Pcdh1-203ENSMUST00000160721 PtprqP0C5E4 2300 aa11.42□□□□□ -0.58
Pcdh1-203ENSMUST00000160721 Krtap27-1E9PX37 202 aa11.42□□□□□ -0.58
Pcdh1-203ENSMUST00000160721 Gm10300Q8C8P7 189 aa11.42□□□□□ -0.58
Pcdh1-203ENSMUST00000160721 Gm7173A0A0G2JEB6 3132 aa11.41□□□□□ -0.58
Pcdh1-203ENSMUST00000160721 Gm9887F6RFI0 207 aa11.4□□□□□ -0.58
Pcdh1-203ENSMUST00000160721 Gm5153P01627 120 aa11.39□□□□□ -0.59
Pcdh1-203ENSMUST00000160721 C130032M10RikQ8C888 123 aa11.39□□□□□ -0.59
Pcdh1-203ENSMUST00000160721 CenpfE9Q3P4 2997 aaKnown RBP11.39□□□□□ -0.59
Pcdh1-203ENSMUST00000160721 Wfdc6bF6ULY1 148 aa11.38□□□□□ -0.59
Pcdh1-203ENSMUST00000160721 Cdip1Q9DB75 208 aa11.38□□□□□ -0.59
Pcdh1-203ENSMUST00000160721 Hectd1Q69ZR2 2618 aaKnown RBP11.38□□□□□ -0.59
Pcdh1-203ENSMUST00000160721 Usp9yF8VPU6 2556 aa11.38□□□□□ -0.59
Pcdh1-203ENSMUST00000160721 Srsf12Q8C8K3 266 aa11.37□□□□□ -0.59
Pcdh1-203ENSMUST00000160721 Defb11Q8R2I7 77 aa11.36□□□□□ -0.59
Pcdh1-203ENSMUST00000160721 UqcrqQ9CQ69 82 aa11.35□□□□□ -0.59
Pcdh1-203ENSMUST00000160721 Gm10549Q3URY4 149 aa11.34□□□□□ -0.59
Pcdh1-203ENSMUST00000160721 Myo15bI7HPW8 3033 aa11.34□□□□□ -0.59
Pcdh1-203ENSMUST00000160721 Cep192E9Q4Y4 2514 aaKnown RBP11.34□□□□□ -0.59
Pcdh1-203ENSMUST00000160721 Q9DAB9 146 aa11.34□□□□□ -0.59
Pcdh1-203ENSMUST00000160721 AtrQ9JKK8 2635 aa11.33□□□□□ -0.6
Pcdh1-203ENSMUST00000160721 Gm17509Q9CZ61 145 aa11.32□□□□□ -0.6
Pcdh1-203ENSMUST00000160721 Ankrd17Q99NH0 2603 aaKnown RBP11.32□□□□□ -0.6
Pcdh1-203ENSMUST00000160721 Igkv8-28A0A0G2JE47 121 aa11.31□□□□□ -0.6
Pcdh1-203ENSMUST00000160721 Gm28374F6SG70 93 aa11.31□□□□□ -0.6
Pcdh1-203ENSMUST00000160721 BC025920Q3US60 128 aa11.3□□□□□ -0.6
Pcdh1-203ENSMUST00000160721 Crip3Q6Q6R3 243 aa11.3□□□□□ -0.6
Pcdh1-203ENSMUST00000160721 4930519P11RikQ9CUJ8 166 aa11.3□□□□□ -0.6
Pcdh1-203ENSMUST00000160721 Ighv2-9A0A075B5Q5 116 aa11.29□□□□□ -0.6
Pcdh1-203ENSMUST00000160721 Gm10570F6VB42 170 aa11.29□□□□□ -0.6
Pcdh1-203ENSMUST00000160721 Krtap24-1G3X9A2 248 aa11.29□□□□□ -0.6
Pcdh1-203ENSMUST00000160721 Apoc4Q61268 124 aa11.29□□□□□ -0.6
Pcdh1-203ENSMUST00000160721 Wfdc17Q5SSJ1 76 aa11.29□□□□□ -0.6
Pcdh1-203ENSMUST00000160721 Itpr1P11881 2749 aa11.28□□□□□ -0.6
Pcdh1-203ENSMUST00000160721 Znf580Q9DB38 172 aa11.27□□□□□ -0.61
Pcdh1-203ENSMUST00000160721 Csdc2Q91YQ3 154 aa11.27□□□□□ -0.61
Pcdh1-203ENSMUST00000160721 Adm2Q7TNK8 150 aa11.26□□□□□ -0.61
Pcdh1-203ENSMUST00000160721 Zfand2aQ9JII7 171 aa11.26□□□□□ -0.61
Pcdh1-203ENSMUST00000160721 Ighv8-13A0A075B5Y0 101 aa11.25□□□□□ -0.61
Pcdh1-203ENSMUST00000160721 Smr3aQ61900 147 aa11.25□□□□□ -0.61
Pcdh1-203ENSMUST00000160721 Spata3Q9D9T6 193 aa11.25□□□□□ -0.61
Pcdh1-203ENSMUST00000160721 Odf3l2Q3TZ65 277 aa11.24□□□□□ -0.61
Pcdh1-203ENSMUST00000160721 Gm16485Q8C4B7 115 aa11.24□□□□□ -0.61
Pcdh1-203ENSMUST00000160721 1600014C23RikQ9DAX4 101 aa11.24□□□□□ -0.61
Pcdh1-203ENSMUST00000160721 1810062G17RikG3X8Y2 129 aa11.23□□□□□ -0.61
Pcdh1-203ENSMUST00000160721 4930518I15RikQ3V2W7 57 aa11.23□□□□□ -0.61
Pcdh1-203ENSMUST00000160721 Jbts17Q8CE72 3214 aa11.23□□□□□ -0.61
Pcdh1-203ENSMUST00000160721 Bean1Q9EQG5 255 aa11.23□□□□□ -0.61
Pcdh1-203ENSMUST00000160721 Nbeal1E9PYP2 2688 aa11.23□□□□□ -0.61
Pcdh1-203ENSMUST00000160721 Gm28230A0A0A0MQ91 144 aa11.22□□□□□ -0.61
Pcdh1-203ENSMUST00000160721 Cd164Q9R0L9 197 aa11.22□□□□□ -0.61
Pcdh1-203ENSMUST00000160721 Q9DAA7 145 aa11.22□□□□□ -0.61
Pcdh1-203ENSMUST00000160721 Col12a1Q60847 3120 aa11.21□□□□□ -0.61
Pcdh1-203ENSMUST00000160721 Reg3aO09037 175 aa11.21□□□□□ -0.62
Pcdh1-203ENSMUST00000160721 Ntn5Q3UQ22 452 aa11.21□□□□□ -0.62
Pcdh1-203ENSMUST00000160721 Defb37Q7TMD2 62 aa11.21□□□□□ -0.62
Pcdh1-203ENSMUST00000160721 Ighv1-56A0A0A6YXG2 117 aa11.2□□□□□ -0.62
Pcdh1-203ENSMUST00000160721 Gm10197F6QEY5 67 aa11.2□□□□□ -0.62
Pcdh1-203ENSMUST00000160721 Spint4Q9D263 159 aa11.2□□□□□ -0.62
Pcdh1-203ENSMUST00000160721 Defb45Q3V490 66 aa11.2□□□□□ -0.62
Pcdh1-203ENSMUST00000160721 Coa6Q8BGD8 79 aa11.19□□□□□ -0.62
Pcdh1-203ENSMUST00000160721 3110070M22RikQ9DAQ7 118 aa11.19□□□□□ -0.62
Pcdh1-203ENSMUST00000160721 FasnP19096 2504 aaKnown RBP11.19□□□□□ -0.62
Pcdh1-203ENSMUST00000160721 Mki67E9PVX6 3177 aaKnown RBP11.17□□□□□ -0.62
Pcdh1-203ENSMUST00000160721 6430550D23RikE9Q1X6 194 aa11.16□□□□□ -0.62
Pcdh1-203ENSMUST00000160721 Defb39Q70KL3 74 aa11.16□□□□□ -0.62
Pcdh1-203ENSMUST00000160721 Gm3233E9Q2H5 230 aa11.15□□□□□ -0.62
Pcdh1-203ENSMUST00000160721 HttP42859 3119 aa11.14□□□□□ -0.63
Pcdh1-203ENSMUST00000160721 Mrpl34Q99N91 92 aa11.14□□□□□ -0.63
Pcdh1-203ENSMUST00000160721 Fam19a3Q7TPG6 132 aa11.12□□□□□ -0.63
Pcdh1-203ENSMUST00000160721 A730009L09RikA0A1B0GS82 72 aa11.12□□□□□ -0.63
Pcdh1-203ENSMUST00000160721 Cox6a2P43023 97 aa11.11□□□□□ -0.63
Pcdh1-203ENSMUST00000160721 Igkv8-19A0A0G2JFN8 121 aa11.1□□□□□ -0.63
Pcdh1-203ENSMUST00000160721 1700018G05RikA0A1B0GSI2 66 aa11.1□□□□□ -0.63
Pcdh1-203ENSMUST00000160721 Sostdc1Q9CQN4 206 aa11.08□□□□□ -0.64
Pcdh1-203ENSMUST00000160721 Msrb1Q9JLC3 116 aa11.08□□□□□ -0.64
Pcdh1-203ENSMUST00000160721 AI854703Q8BIN3 203 aa11.07□□□□□ -0.64
Pcdh1-203ENSMUST00000160721 A530084C06RikQ3UTW2 186 aa11.07□□□□□ -0.64
Pcdh1-203ENSMUST00000160721 Gm10160F6Y577 67 aa11.06□□□□□ -0.64
Pcdh1-203ENSMUST00000160721 Ighv2-5A0A0A6YY69 116 aa11.05□□□□□ -0.64
Pcdh1-203ENSMUST00000160721 FlnaQ8BTM8 2647 aaKnown RBP11.05□□□□□ -0.64
Pcdh1-203ENSMUST00000160721 Tnrc18Q80WC3 2878 aa11.05□□□□□ -0.64
Pcdh1-203ENSMUST00000160721 Igkv8-27A0A0G2JF28 120 aa11.04□□□□□ -0.64
Pcdh1-203ENSMUST00000160721 Rev3lQ61493 3122 aa11.04□□□□□ -0.64
Pcdh1-203ENSMUST00000160721 Chd7A2AJK6 2986 aaKnown RBP11.04□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 49 ms