RNA–Protein interactions for RNA: ENSMUST00000112251.8

Ubr3-202, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ubr3, Length 8,081 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-202ENSMUST00000112251 Coa6Q8BGD8 79 aa11.93□□□□□ -0.5
Ubr3-202ENSMUST00000112251 Q9DAA7 145 aa11.92□□□□□ -0.5
Ubr3-202ENSMUST00000112251 4930432M17RikQ3V0W9 174 aa11.92□□□□□ -0.5
Ubr3-202ENSMUST00000112251 Gm10509O88255 85 aa11.92□□□□□ -0.5
Ubr3-202ENSMUST00000112251 Gm10642Q3TWM1 71 aa11.91□□□□□ -0.5
Ubr3-202ENSMUST00000112251 Polr2kQ63871 58 aa11.91□□□□□ -0.5
Ubr3-202ENSMUST00000112251 Pla2g2dQ9WVF6 144 aa11.91□□□□□ -0.5
Ubr3-202ENSMUST00000112251 Gm10226O88253 85 aa11.91□□□□□ -0.5
Ubr3-202ENSMUST00000112251 AI606181Q8C7B9 129 aa11.9□□□□□ -0.5
Ubr3-202ENSMUST00000112251 Thsd7bQ6P4U0 1607 aa11.9□□□□□ -0.5
Ubr3-202ENSMUST00000112251 Gm10845Q3UNY9 185 aa11.9□□□□□ -0.5
Ubr3-202ENSMUST00000112251 4930518I15RikQ3V2W7 57 aa11.9□□□□□ -0.5
Ubr3-202ENSMUST00000112251 Col5a1O88207 1838 aa11.89□□□□□ -0.51
Ubr3-202ENSMUST00000112251 4930507D05RikQ8C9C9 103 aa11.89□□□□□ -0.51
Ubr3-202ENSMUST00000112251 Msrb1Q9JLC3 116 aa11.88□□□□□ -0.51
Ubr3-202ENSMUST00000112251 Ighv8-13A0A075B5Y0 101 aa11.87□□□□□ -0.51
Ubr3-202ENSMUST00000112251 1700018G05RikA0A1B0GSI2 66 aa11.86□□□□□ -0.51
Ubr3-202ENSMUST00000112251 7530416G11RikJ3QJX6 159 aa11.86□□□□□ -0.51
Ubr3-202ENSMUST00000112251 Gm9925F6T2U3 160 aa11.86□□□□□ -0.51
Ubr3-202ENSMUST00000112251 1700056E22RikF7CNM6 234 aa11.86□□□□□ -0.51
Ubr3-202ENSMUST00000112251 Defb10Q8R2I8 73 aa11.85□□□□□ -0.51
Ubr3-202ENSMUST00000112251 Bri3P28662 125 aa11.85□□□□□ -0.51
Ubr3-202ENSMUST00000112251 A530084C06RikQ3UTW2 186 aa11.84□□□□□ -0.51
Ubr3-202ENSMUST00000112251 Gm10135F6TEE5 83 aa11.83□□□□□ -0.52
Ubr3-202ENSMUST00000112251 Gm9922Q8C3P1 144 aa11.83□□□□□ -0.52
Ubr3-202ENSMUST00000112251 CrygaP04345 174 aa11.82□□□□□ -0.52
Ubr3-202ENSMUST00000112251 Gm9767G3X930 207 aa11.81□□□□□ -0.52
Ubr3-202ENSMUST00000112251 Gm9903Q8C9Y8 129 aa11.81□□□□□ -0.52
Ubr3-202ENSMUST00000112251 Gm26661M0QWV4 156 aa11.79□□□□□ -0.52
Ubr3-202ENSMUST00000112251 2310034G01RikA0A286YDL3 209 aa11.79□□□□□ -0.52
Ubr3-202ENSMUST00000112251 Hivep2Q3UHF7 2430 aa11.79□□□□□ -0.52
Ubr3-202ENSMUST00000112251 Cdc42se1Q8BHL7 80 aa11.78□□□□□ -0.52
Ubr3-202ENSMUST00000112251 Fam19a3Q7TPG6 132 aa11.78□□□□□ -0.52
Ubr3-202ENSMUST00000112251 Pla2g2eQ9QUL3 142 aa11.76□□□□□ -0.53
Ubr3-202ENSMUST00000112251 Spaca4Q80ZQ0 127 aa11.74□□□□□ -0.53
Ubr3-202ENSMUST00000112251 Gm21886J3QJU9 214 aa11.74□□□□□ -0.53
Ubr3-202ENSMUST00000112251 Golgb1E9PVZ8 3238 aa11.73□□□□□ -0.53
Ubr3-202ENSMUST00000112251 Rpl37aP61514 92 aa11.73□□□□□ -0.53
Ubr3-202ENSMUST00000112251 Gpr15lA0A0B4J1N3 78 aa11.71□□□□□ -0.53
Ubr3-202ENSMUST00000112251 Cd164l2Q9D6W7 172 aa11.71□□□□□ -0.54
Ubr3-202ENSMUST00000112251 Lce6aD3YV94 81 aa11.7□□□□□ -0.54
Ubr3-202ENSMUST00000112251 CriptO70333 101 aa11.7□□□□□ -0.54
Ubr3-202ENSMUST00000112251 Gm10549Q3URY4 149 aa11.7□□□□□ -0.54
Ubr3-202ENSMUST00000112251 A930009A15RikG3UYI6 118 aa11.69□□□□□ -0.54
Ubr3-202ENSMUST00000112251 Gm27235Q3UW50 83 aa11.69□□□□□ -0.54
Ubr3-202ENSMUST00000112251 Defb2P82020 71 aa11.68□□□□□ -0.54
Ubr3-202ENSMUST00000112251 Gm44790A0A0N4SV91 103 aa11.67□□□□□ -0.54
Ubr3-202ENSMUST00000112251 AvpP35455 168 aa11.67□□□□□ -0.54
Ubr3-202ENSMUST00000112251 Spink13Q3UTS8 97 aa11.66□□□□□ -0.54
Ubr3-202ENSMUST00000112251 Odf3l2Q3TZ65 277 aa11.66□□□□□ -0.54
Ubr3-202ENSMUST00000112251 Rtl10D3YWW5 146 aa11.66□□□□□ -0.54
Ubr3-202ENSMUST00000112251 Znf580Q9DB38 172 aa11.65□□□□□ -0.55
Ubr3-202ENSMUST00000112251 Col4a5Q63ZW6 1691 aa11.65□□□□□ -0.55
Ubr3-202ENSMUST00000112251 Zfp462B1AWL2 2495 aaKnown RBP11.64□□□□□ -0.55
Ubr3-202ENSMUST00000112251 CnfnQ6PCW6 111 aa11.63□□□□□ -0.55
Ubr3-202ENSMUST00000112251 Phf5aP83870 110 aaKnown RBP11.62□□□□□ -0.55
Ubr3-202ENSMUST00000112251 Krtap27-1E9PX37 202 aa11.62□□□□□ -0.55
Ubr3-202ENSMUST00000112251 Dmac1Q9CQ00 111 aa11.62□□□□□ -0.55
Ubr3-202ENSMUST00000112251 Jbts17Q8CE72 3214 aa11.61□□□□□ -0.55
Ubr3-202ENSMUST00000112251 Gm3443F7CCV5 94 aa11.59□□□□□ -0.55
Ubr3-202ENSMUST00000112251 Igf2rQ07113 2483 aaKnown RBP11.59□□□□□ -0.55
Ubr3-202ENSMUST00000112251 Col4a6B1AVK5 1691 aa11.58□□□□□ -0.56
Ubr3-202ENSMUST00000112251 Gm10300Q8C8P7 189 aa11.58□□□□□ -0.56
Ubr3-202ENSMUST00000112251 Cdip1Q9DB75 208 aa11.56□□□□□ -0.56
Ubr3-202ENSMUST00000112251 Pla2g2cP48076 150 aa11.56□□□□□ -0.56
Ubr3-202ENSMUST00000112251 Sptbn4E9PX29 2561 aa11.56□□□□□ -0.56
Ubr3-202ENSMUST00000112251 Col4a4Q9QZR9 1682 aa11.55□□□□□ -0.56
Ubr3-202ENSMUST00000112251 Srsf12Q8C8K3 266 aa11.55□□□□□ -0.56
Ubr3-202ENSMUST00000112251 Znf575Q3TXZ1 239 aa11.53□□□□□ -0.56
Ubr3-202ENSMUST00000112251 Rps28P62858 69 aaKnown RBP11.53□□□□□ -0.56
Ubr3-202ENSMUST00000112251 Coa5Q99M07 74 aa11.51□□□□□ -0.57
Ubr3-202ENSMUST00000112251 Gm5617Q91VN2 117 aa11.5□□□□□ -0.57
Ubr3-202ENSMUST00000112251 Ptpn13Q64512 2453 aa11.5□□□□□ -0.57
Ubr3-202ENSMUST00000112251 Gm11627A6PWP4 55 aa11.48□□□□□ -0.57
Ubr3-202ENSMUST00000112251 Gm10770F7D043 238 aa11.48□□□□□ -0.57
Ubr3-202ENSMUST00000112251 Defb11Q8R2I7 77 aa11.48□□□□□ -0.57
Ubr3-202ENSMUST00000112251 Gm17689B3GLJ4 109 aa11.46□□□□□ -0.57
Ubr3-202ENSMUST00000112251 Krtap16-1A2A5X5 502 aa11.46□□□□□ -0.58
Ubr3-202ENSMUST00000112251 Kmt2bO08550 2713 aa11.46□□□□□ -0.58
Ubr3-202ENSMUST00000112251 Elof1P60003 83 aa11.45□□□□□ -0.58
Ubr3-202ENSMUST00000112251 Ighv2-2A0A075B5P8 116 aa11.44□□□□□ -0.58
Ubr3-202ENSMUST00000112251 P01821 116 aa11.44□□□□□ -0.58
Ubr3-202ENSMUST00000112251 Gm5464Q3UY29 175 aa11.44□□□□□ -0.58
Ubr3-202ENSMUST00000112251 MobpQ9D2P8 170 aa11.42□□□□□ -0.58
Ubr3-202ENSMUST00000112251 Notch2O35516 2470 aa11.39□□□□□ -0.59
Ubr3-202ENSMUST00000112251 Spink7Q6IE32 76 aa11.39□□□□□ -0.59
Ubr3-202ENSMUST00000112251 Uqcr11Q9CPX8 56 aa11.38□□□□□ -0.59
Ubr3-202ENSMUST00000112251 Col27a1Q5QNQ9 1845 aa11.38□□□□□ -0.59
Ubr3-202ENSMUST00000112251 Q8BT88 171 aa11.36□□□□□ -0.59
Ubr3-202ENSMUST00000112251 AI854703Q8BIN3 203 aa11.35□□□□□ -0.59
Ubr3-202ENSMUST00000112251 Fam168bQ80XQ8 194 aa11.34□□□□□ -0.59
Ubr3-202ENSMUST00000112251 Lrrk2Q5S006 2527 aa11.34□□□□□ -0.59
Ubr3-202ENSMUST00000112251 Snhg11Q4G0K9 87 aa11.33□□□□□ -0.6
Ubr3-202ENSMUST00000112251 E130208F15RikQ3UPV3 143 aa11.31□□□□□ -0.6
Ubr3-202ENSMUST00000112251 Gm16181B0V2H2 73 aa11.31□□□□□ -0.6
Ubr3-202ENSMUST00000112251 UtrnE9Q6R7 3430 aa11.3□□□□□ -0.6
Ubr3-202ENSMUST00000112251 Gm3880A0A1B0GSB3 72 aa11.26□□□□□ -0.61
Ubr3-202ENSMUST00000112251 SrcapA0A087WQ44 3271 aa11.26□□□□□ -0.61
Ubr3-202ENSMUST00000112251 Crip3Q6Q6R3 243 aa11.26□□□□□ -0.61
Ubr3-202ENSMUST00000112251 Phxr4P15974 95 aa11.25□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 50.7 ms