RNA–Protein interactions for RNA: ENSMUST00000056889.14

Chd4-201, Transcript of Chromodomain-helicase-DNA-binding protein 4, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Chd4, Length 6,697 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4-201ENSMUST00000056889 Ighv8-13A0A075B5Y0 101 aa10.39□□□□□ -0.75
Chd4-201ENSMUST00000056889 SonQ9QX47 2444 aaKnown RBP10.38□□□□□ -0.75
Chd4-201ENSMUST00000056889 Mp68P56379 58 aa10.37□□□□□ -0.75
Chd4-201ENSMUST00000056889 AI854703Q8BIN3 203 aa10.37□□□□□ -0.75
Chd4-201ENSMUST00000056889 A930002H24RikQ8C8Y3 163 aa10.35□□□□□ -0.75
Chd4-201ENSMUST00000056889 Lrp4Q8VI56 1905 aa10.35□□□□□ -0.75
Chd4-201ENSMUST00000056889 Gm10642Q3TWM1 71 aa10.35□□□□□ -0.75
Chd4-201ENSMUST00000056889 BC025920Q3US60 128 aa10.35□□□□□ -0.75
Chd4-201ENSMUST00000056889 Rpl37aP61514 92 aa10.34□□□□□ -0.75
Chd4-201ENSMUST00000056889 TectaO08523 2155 aa10.34□□□□□ -0.75
Chd4-201ENSMUST00000056889 Gm44790A0A0N4SV91 103 aa10.34□□□□□ -0.75
Chd4-201ENSMUST00000056889 Phxr5P08399 672 aa10.34□□□□□ -0.75
Chd4-201ENSMUST00000056889 Defb45Q3V490 66 aa10.33□□□□□ -0.76
Chd4-201ENSMUST00000056889 Igkv8-27A0A0G2JF28 120 aa10.33□□□□□ -0.76
Chd4-201ENSMUST00000056889 Tns1E9Q0S6 1888 aaKnown RBP10.32□□□□□ -0.76
Chd4-201ENSMUST00000056889 Znf414Q9DCK4 299 aa10.32□□□□□ -0.76
Chd4-201ENSMUST00000056889 Defb2P82020 71 aa10.32□□□□□ -0.76
Chd4-201ENSMUST00000056889 Gm21886J3QJU9 214 aa10.31□□□□□ -0.76
Chd4-201ENSMUST00000056889 Pla2g2cP48076 150 aa10.31□□□□□ -0.76
Chd4-201ENSMUST00000056889 Gm28374F6SG70 93 aa10.31□□□□□ -0.76
Chd4-201ENSMUST00000056889 Sec16aA2AIX1 2377 aa10.3□□□□□ -0.76
Chd4-201ENSMUST00000056889 Rps28P62858 69 aaKnown RBP10.3□□□□□ -0.76
Chd4-201ENSMUST00000056889 Nav2E9Q842 2432 aa10.3□□□□□ -0.76
Chd4-201ENSMUST00000056889 Prol1E9PYQ4 312 aa10.29□□□□□ -0.76
Chd4-201ENSMUST00000056889 Ighv2-5A0A0A6YY69 116 aa10.29□□□□□ -0.76
Chd4-201ENSMUST00000056889 Ep300B2RWS6 2412 aa10.28□□□□□ -0.76
Chd4-201ENSMUST00000056889 Krtap16-1A2A5X5 502 aa10.27□□□□□ -0.77
Chd4-201ENSMUST00000056889 Pcsk5Q04592 1877 aa10.26□□□□□ -0.77
Chd4-201ENSMUST00000056889 Ncor1Q60974 2453 aa10.26□□□□□ -0.77
Chd4-201ENSMUST00000056889 Dopey1Q8BL99 2399 aa10.25□□□□□ -0.77
Chd4-201ENSMUST00000056889 Q9DAB9 146 aa10.25□□□□□ -0.77
Chd4-201ENSMUST00000056889 Gm17689B3GLJ4 109 aa10.24□□□□□ -0.77
Chd4-201ENSMUST00000056889 Smr3aQ61900 147 aa10.24□□□□□ -0.77
Chd4-201ENSMUST00000056889 Prr9Q8BV84 116 aa10.24□□□□□ -0.77
Chd4-201ENSMUST00000056889 Cspg4Q8VHY0 2327 aa10.23□□□□□ -0.77
Chd4-201ENSMUST00000056889 3110070M22RikQ9DAQ7 118 aa10.22□□□□□ -0.77
Chd4-201ENSMUST00000056889 Gm10770F7D043 238 aa10.22□□□□□ -0.77
Chd4-201ENSMUST00000056889 7530416G11RikJ3QJX6 159 aa10.22□□□□□ -0.77
Chd4-201ENSMUST00000056889 AI606181Q8C7B9 129 aa10.22□□□□□ -0.77
Chd4-201ENSMUST00000056889 Defb10Q8R2I8 73 aa10.22□□□□□ -0.77
Chd4-201ENSMUST00000056889 Limd2Q8BGB5 128 aa10.2□□□□□ -0.78
Chd4-201ENSMUST00000056889 Coa5Q99M07 74 aa10.2□□□□□ -0.78
Chd4-201ENSMUST00000056889 Elof1P60003 83 aa10.17□□□□□ -0.78
Chd4-201ENSMUST00000056889 Phf5aP83870 110 aaKnown RBP10.17□□□□□ -0.78
Chd4-201ENSMUST00000056889 Gm5464Q3UY29 175 aa10.17□□□□□ -0.78
Chd4-201ENSMUST00000056889 Rnase13Q5GAM7 153 aa10.16□□□□□ -0.78
Chd4-201ENSMUST00000056889 Ighv2-2A0A075B5P8 116 aa10.15□□□□□ -0.78
Chd4-201ENSMUST00000056889 P01821 116 aa10.15□□□□□ -0.78
Chd4-201ENSMUST00000056889 Spaca4Q80ZQ0 127 aa10.15□□□□□ -0.79
Chd4-201ENSMUST00000056889 Dmac1Q9CQ00 111 aa10.15□□□□□ -0.79
Chd4-201ENSMUST00000056889 Myo9aQ8C170 2542 aa10.14□□□□□ -0.79
Chd4-201ENSMUST00000056889 CrygaP04345 174 aa10.14□□□□□ -0.79
Chd4-201ENSMUST00000056889 Gm5617Q91VN2 117 aa10.12□□□□□ -0.79
Chd4-201ENSMUST00000056889 RetnlbQ99P86 105 aa10.12□□□□□ -0.79
Chd4-201ENSMUST00000056889 Cdc42se1Q8BHL7 80 aa10.12□□□□□ -0.79
Chd4-201ENSMUST00000056889 Q8BGJ3 129 aa10.11□□□□□ -0.79
Chd4-201ENSMUST00000056889 4930507D05RikQ8C9C9 103 aa10.1□□□□□ -0.79
Chd4-201ENSMUST00000056889 AcacbE9Q4Z2 2448 aa10.1□□□□□ -0.79
Chd4-201ENSMUST00000056889 Gpr15lA0A0B4J1N3 78 aa10.09□□□□□ -0.79
Chd4-201ENSMUST00000056889 Gm10308Q9CVR5 141 aa10.08□□□□□ -0.8
Chd4-201ENSMUST00000056889 MobpQ9D2P8 170 aa10.06□□□□□ -0.8
Chd4-201ENSMUST00000056889 Gm9903Q8C9Y8 129 aa10.05□□□□□ -0.8
Chd4-201ENSMUST00000056889 Fam168bQ80XQ8 194 aa10.05□□□□□ -0.8
Chd4-201ENSMUST00000056889 Gm11627A6PWP4 55 aa10.05□□□□□ -0.8
Chd4-201ENSMUST00000056889 Q8BT88 171 aa10.05□□□□□ -0.8
Chd4-201ENSMUST00000056889 E130208F15RikQ3UPV3 143 aa10.04□□□□□ -0.8
Chd4-201ENSMUST00000056889 Snhg11Q4G0K9 87 aa10.04□□□□□ -0.8
Chd4-201ENSMUST00000056889 Flg2Q2VIS4 2362 aa10.04□□□□□ -0.8
Chd4-201ENSMUST00000056889 Igf2rQ07113 2483 aaKnown RBP10.03□□□□□ -0.8
Chd4-201ENSMUST00000056889 NbasE9Q411 2356 aa10.02□□□□□ -0.81
Chd4-201ENSMUST00000056889 Srsf12Q8C8K3 266 aa10.02□□□□□ -0.81
Chd4-201ENSMUST00000056889 Gm3250E9Q1M3 230 aa10.01□□□□□ -0.81
Chd4-201ENSMUST00000056889 OtoglF7A4A7 2325 aa10.01□□□□□ -0.81
Chd4-201ENSMUST00000056889 Spg11Q3UHA3 2430 aa10.01□□□□□ -0.81
Chd4-201ENSMUST00000056889 Col4a4Q9QZR9 1682 aa9.98□□□□□ -0.81
Chd4-201ENSMUST00000056889 BC067074F6RXI4 2391 aa9.97□□□□□ -0.81
Chd4-201ENSMUST00000056889 Gm9573F7C950 1606 aa9.96□□□□□ -0.81
Chd4-201ENSMUST00000056889 Eif4ebp3Q80VV3 101 aa9.96□□□□□ -0.81
Chd4-201ENSMUST00000056889 Phxr4P15974 95 aa9.96□□□□□ -0.82
Chd4-201ENSMUST00000056889 Gm26661M0QWV4 156 aa9.96□□□□□ -0.82
Chd4-201ENSMUST00000056889 SrcapA0A087WQ44 3271 aa9.94□□□□□ -0.82
Chd4-201ENSMUST00000056889 Col27a1Q5QNQ9 1845 aa9.94□□□□□ -0.82
Chd4-201ENSMUST00000056889 Gm3285A0A1W2P7U0 201 aa9.92□□□□□ -0.82
Chd4-201ENSMUST00000056889 Gm27235Q3UW50 83 aa9.91□□□□□ -0.82
Chd4-201ENSMUST00000056889 Gm11213A0A1B0GR83 88 aa9.9□□□□□ -0.82
Chd4-201ENSMUST00000056889 Krtap11-1E9Q2E9 183 aa9.9□□□□□ -0.82
Chd4-201ENSMUST00000056889 Gm10772F7AIG4 85 aa9.9□□□□□ -0.82
Chd4-201ENSMUST00000056889 Gm20538F6Z9R1 75 aa9.89□□□□□ -0.83
Chd4-201ENSMUST00000056889 Gm16181B0V2H2 73 aa9.89□□□□□ -0.83
Chd4-201ENSMUST00000056889 Gm10837Q3UTT8 145 aa9.88□□□□□ -0.83
Chd4-201ENSMUST00000056889 A330070K13RikQ8CA53 115 aa9.88□□□□□ -0.83
Chd4-201ENSMUST00000056889 Pkd1l2Q7TN88 2461 aa9.87□□□□□ -0.83
Chd4-201ENSMUST00000056889 Pla2g10Q9QXX3 151 aa9.85□□□□□ -0.83
Chd4-201ENSMUST00000056889 Uqcr11Q9CPX8 56 aa9.85□□□□□ -0.83
Chd4-201ENSMUST00000056889 Fam229bQ8CF36 80 aa9.82□□□□□ -0.84
Chd4-201ENSMUST00000056889 Nav3Q80TN7 2359 aa9.82□□□□□ -0.84
Chd4-201ENSMUST00000056889 Hivep3A2A884 2348 aa9.8□□□□□ -0.84
Chd4-201ENSMUST00000056889 Rif1Q6PR54 2419 aaKnown RBP9.8□□□□□ -0.84
Chd4-201ENSMUST00000056889 Gm10643Q3URG9 111 aa9.79□□□□□ -0.84
Chd4-201ENSMUST00000056889 1810062G17RikG3X8Y2 129 aa9.79□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 50.3 ms