RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Gm9903Q8C9Y8 129 aa10.24□□□□□ -0.77
Nup54-201ENSMUST00000038514 Gm10320E9PW43 113 aa10.23□□□□□ -0.77
Nup54-201ENSMUST00000038514 Klk12B2RVZ0 247 aa10.22□□□□□ -0.77
Nup54-201ENSMUST00000038514 Serp2Q6TAW2 65 aa10.22□□□□□ -0.77
Nup54-201ENSMUST00000038514 4930518I15RikQ3V2W7 57 aa10.22□□□□□ -0.77
Nup54-201ENSMUST00000038514 Gm10308Q9CVR5 141 aa10.22□□□□□ -0.77
Nup54-201ENSMUST00000038514 Igkv3-9A0A140T8P4 119 aa10.21□□□□□ -0.77
Nup54-201ENSMUST00000038514 Krtap24-1G3X9A2 248 aa10.21□□□□□ -0.77
Nup54-201ENSMUST00000038514 Cox7bP56393 80 aa10.21□□□□□ -0.77
Nup54-201ENSMUST00000038514 Igkv8-21A0A140T8P7 120 aa10.21□□□□□ -0.78
Nup54-201ENSMUST00000038514 4930535I16RikQ9CUI2 172 aa10.21□□□□□ -0.78
Nup54-201ENSMUST00000038514 Q8R092 253 aa10.19□□□□□ -0.78
Nup54-201ENSMUST00000038514 4930556J24RikQ9D4U7 146 aa10.19□□□□□ -0.78
Nup54-201ENSMUST00000038514 Akap13E9Q394 2776 aa10.19□□□□□ -0.78
Nup54-201ENSMUST00000038514 Igkv8-27A0A0G2JF28 120 aa10.19□□□□□ -0.78
Nup54-201ENSMUST00000038514 Igkv8-30A0A140T8M3 121 aa10.19□□□□□ -0.78
Nup54-201ENSMUST00000038514 Gm10518F6UQQ9 182 aa10.19□□□□□ -0.78
Nup54-201ENSMUST00000038514 Leap2Q91V13 76 aa10.19□□□□□ -0.78
Nup54-201ENSMUST00000038514 Ormdl1Q921I0 153 aa10.19□□□□□ -0.78
Nup54-201ENSMUST00000038514 Defa7P50705 93 aa10.18□□□□□ -0.78
Nup54-201ENSMUST00000038514 Naa38Q9D2U5 125 aa10.18□□□□□ -0.78
Nup54-201ENSMUST00000038514 Klk9Q32M27 251 aa10.18□□□□□ -0.78
Nup54-201ENSMUST00000038514 Krtap11-1E9Q2E9 183 aa10.17□□□□□ -0.78
Nup54-201ENSMUST00000038514 Ube2d4D3YUH6 135 aa10.17□□□□□ -0.78
Nup54-201ENSMUST00000038514 Tcl1b5P56845 121 aa10.17□□□□□ -0.78
Nup54-201ENSMUST00000038514 Wfdc12Q9JHY3 85 aa10.17□□□□□ -0.78
Nup54-201ENSMUST00000038514 Igkv8-26A0A075B5N5 123 aa10.16□□□□□ -0.78
Nup54-201ENSMUST00000038514 Mrpl52Q9D0Y8 121 aa10.16□□□□□ -0.78
Nup54-201ENSMUST00000038514 D730001G18RikA0A087WQU7 115 aa10.16□□□□□ -0.78
Nup54-201ENSMUST00000038514 Igkv8-16A0A0G2JDG9 121 aa10.16□□□□□ -0.78
Nup54-201ENSMUST00000038514 Igkv4-58A0A0G2JGI6 119 aa10.15□□□□□ -0.78
Nup54-201ENSMUST00000038514 Gm9805F6YK59 57 aa10.15□□□□□ -0.78
Nup54-201ENSMUST00000038514 Fam19a1Q7TPG8 133 aa10.15□□□□□ -0.78
Nup54-201ENSMUST00000038514 Igkv8-24A0A140T8P5 121 aa10.15□□□□□ -0.79
Nup54-201ENSMUST00000038514 Defa4P28311 92 aa10.15□□□□□ -0.79
Nup54-201ENSMUST00000038514 Unc79Q0KK59 2596 aa10.14□□□□□ -0.79
Nup54-201ENSMUST00000038514 Tmem243B2RVB9 118 aa10.14□□□□□ -0.79
Nup54-201ENSMUST00000038514 Reg3dQ9QUS9 175 aa10.14□□□□□ -0.79
Nup54-201ENSMUST00000038514 Usp9yF8VPU6 2556 aa10.14□□□□□ -0.79
Nup54-201ENSMUST00000038514 MtorQ9JLN9 2549 aa10.14□□□□□ -0.79
Nup54-201ENSMUST00000038514 Ighv10-1A0A0B4J1J6 119 aa10.14□□□□□ -0.79
Nup54-201ENSMUST00000038514 Defa21Q8C1P2 93 aa10.14□□□□□ -0.79
Nup54-201ENSMUST00000038514 EnhoQ8K1D8 76 aa10.14□□□□□ -0.79
Nup54-201ENSMUST00000038514 NipblQ6KCD5 2798 aaKnown RBP10.13□□□□□ -0.79
Nup54-201ENSMUST00000038514 Tmem258P61166 79 aa10.12□□□□□ -0.79
Nup54-201ENSMUST00000038514 Dad1P61804 113 aa10.12□□□□□ -0.79
Nup54-201ENSMUST00000038514 Inafm2A0A1L1STD6 152 aa10.11□□□□□ -0.79
Nup54-201ENSMUST00000038514 Ubl5Q9EPV8 73 aa10.11□□□□□ -0.79
Nup54-201ENSMUST00000038514 Gm10770F7D043 238 aa10.11□□□□□ -0.79
Nup54-201ENSMUST00000038514 CrygdP04342 174 aa10.11□□□□□ -0.79
Nup54-201ENSMUST00000038514 Rps28P62858 69 aaKnown RBP10.11□□□□□ -0.79
Nup54-201ENSMUST00000038514 CrygeQ03740 174 aa10.11□□□□□ -0.79
Nup54-201ENSMUST00000038514 CrygfQ9CXV3 174 aa10.1□□□□□ -0.79
Nup54-201ENSMUST00000038514 Epg5Q80TA9 2572 aa10.1□□□□□ -0.79
Nup54-201ENSMUST00000038514 Ighv2-5A0A0A6YY69 116 aa10.1□□□□□ -0.79
Nup54-201ENSMUST00000038514 Col7a1Q63870 2944 aa10.09□□□□□ -0.79
Nup54-201ENSMUST00000038514 AY074887Q8R5F9 132 aa10.09□□□□□ -0.79
Nup54-201ENSMUST00000038514 Fam229bQ8CF36 80 aa10.09□□□□□ -0.79
Nup54-201ENSMUST00000038514 Higd2aQ9CQJ1 106 aa10.09□□□□□ -0.79
Nup54-201ENSMUST00000038514 MplkipQ9D011 178 aa10.09□□□□□ -0.79
Nup54-201ENSMUST00000038514 Zfp462B1AWL2 2495 aaKnown RBP10.08□□□□□ -0.8
Nup54-201ENSMUST00000038514 Defa20Q45VN2 95 aa10.08□□□□□ -0.8
Nup54-201ENSMUST00000038514 Cmc4Q61908 68 aa10.08□□□□□ -0.8
Nup54-201ENSMUST00000038514 Gm11213A0A1B0GR83 88 aa10.08□□□□□ -0.8
Nup54-201ENSMUST00000038514 Msrb1Q9JLC3 116 aa10.08□□□□□ -0.8
Nup54-201ENSMUST00000038514 Gm19935A0A1B0GSF9 52 aa10.07□□□□□ -0.8
Nup54-201ENSMUST00000038514 Lamtor3O88653 124 aa10.07□□□□□ -0.8
Nup54-201ENSMUST00000038514 Gm3250E9Q1M3 230 aa10.07□□□□□ -0.8
Nup54-201ENSMUST00000038514 Erdr1J3QMM0 206 aa10.07□□□□□ -0.8
Nup54-201ENSMUST00000038514 GhrhP16043 103 aa10.06□□□□□ -0.8
Nup54-201ENSMUST00000038514 9530003J23RikQ8BM26 151 aa10.06□□□□□ -0.8
Nup54-201ENSMUST00000038514 E130114P18RikF6S0S7 154 aa10.06□□□□□ -0.8
Nup54-201ENSMUST00000038514 Ighv8-13A0A075B5Y0 101 aa10.04□□□□□ -0.8
Nup54-201ENSMUST00000038514 Defa23Q5G866 93 aa10.04□□□□□ -0.8
Nup54-201ENSMUST00000038514 E130218I03RikA0A0U1RNU5 63 aa10.04□□□□□ -0.8
Nup54-201ENSMUST00000038514 2310034G01RikA0A286YDL3 209 aa10.04□□□□□ -0.8
Nup54-201ENSMUST00000038514 A730071L15RikQ8C4X0 137 aa10.04□□□□□ -0.8
Nup54-201ENSMUST00000038514 Mast4Q811L6 2618 aa10.04□□□□□ -0.8
Nup54-201ENSMUST00000038514 Gm17509Q9CZ61 145 aa10.03□□□□□ -0.8
Nup54-201ENSMUST00000038514 Igkv3-1A0A075B5P1 119 aa10.03□□□□□ -0.8
Nup54-201ENSMUST00000038514 Igkv1-110A0A0B4J1I0 119 aa10.03□□□□□ -0.8
Nup54-201ENSMUST00000038514 Brwd1Q921C3 2304 aa10.02□□□□□ -0.8
Nup54-201ENSMUST00000038514 Igkv4-92A0A0B4J1I2 117 aa10.01□□□□□ -0.81
Nup54-201ENSMUST00000038514 Igkv8-34A0A0G2JDU0 121 aa10.01□□□□□ -0.81
Nup54-201ENSMUST00000038514 Gm17689B3GLJ4 109 aa10.01□□□□□ -0.81
Nup54-201ENSMUST00000038514 Gm3233E9Q2H5 230 aa10.01□□□□□ -0.81
Nup54-201ENSMUST00000038514 Rbm3O89086 153 aaKnown RBP10.01□□□□□ -0.81
Nup54-201ENSMUST00000038514 Samd13D3YUG0 102 aa10□□□□□ -0.81
Nup54-201ENSMUST00000038514 Hspg2Q05793 3707 aaKnown RBP10□□□□□ -0.81
Nup54-201ENSMUST00000038514 Pde6gP09174 87 aa9.99□□□□□ -0.81
Nup54-201ENSMUST00000038514 Elof1P60003 83 aa9.99□□□□□ -0.81
Nup54-201ENSMUST00000038514 A830005F24RikQ8BRT5 167 aa9.99□□□□□ -0.81
Nup54-201ENSMUST00000038514 Ndufc1Q9CQY9 76 aa9.99□□□□□ -0.81
Nup54-201ENSMUST00000038514 Hivep3A2A884 2348 aa9.98□□□□□ -0.81
Nup54-201ENSMUST00000038514 Ighv2-2A0A075B5P8 116 aa9.98□□□□□ -0.81
Nup54-201ENSMUST00000038514 P01821 116 aa9.98□□□□□ -0.81
Nup54-201ENSMUST00000038514 B230307C23RikQ8BLB2 64 aa9.98□□□□□ -0.81
Nup54-201ENSMUST00000038514 Ufsp1Q9CZP0 217 aa9.98□□□□□ -0.81
Nup54-201ENSMUST00000038514 A0A286YCN5 57 aa9.97□□□□□ -0.81
Nup54-201ENSMUST00000038514 9430015G10RikA2ASP7 199 aa9.97□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 54.7 ms