RNA–Protein interactions for RNA: ENSMUST00000098441.9

Col6a6-202, Transcript of Collagen alpha-6(VI) chain, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Col6a6, Length 8,781 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6-202ENSMUST00000098441 Ighv3-3A0A0A6YWL2 116 aa8.33□□□□□ -1.08
Col6a6-202ENSMUST00000098441 Igkv8-28A0A0G2JE47 121 aa8.33□□□□□ -1.08
Col6a6-202ENSMUST00000098441 P01823 113 aa8.33□□□□□ -1.08
Col6a6-202ENSMUST00000098441 CstadQ9D245 104 aa8.32□□□□□ -1.08
Col6a6-202ENSMUST00000098441 PscaP57096 123 aa8.32□□□□□ -1.08
Col6a6-202ENSMUST00000098441 Ube2d3P61079 147 aa8.32□□□□□ -1.08
Col6a6-202ENSMUST00000098441 BtcQ05928 177 aa8.32□□□□□ -1.08
Col6a6-202ENSMUST00000098441 Igkv3-7A0A0G2JE31 119 aa8.32□□□□□ -1.08
Col6a6-202ENSMUST00000098441 Csdc2Q91YQ3 154 aa8.32□□□□□ -1.08
Col6a6-202ENSMUST00000098441 Gm11011D3Z3L9 86 aa8.31□□□□□ -1.08
Col6a6-202ENSMUST00000098441 Znf239P24399 201 aa8.31□□□□□ -1.08
Col6a6-202ENSMUST00000098441 Rpl28P41105 137 aaKnown RBP8.31□□□□□ -1.08
Col6a6-202ENSMUST00000098441 Abca12E9Q876 2595 aa8.31□□□□□ -1.08
Col6a6-202ENSMUST00000098441 Dkk4Q8VEJ3 221 aa8.31□□□□□ -1.08
Col6a6-202ENSMUST00000098441 P01747 120 aa8.3□□□□□ -1.08
Col6a6-202ENSMUST00000098441 Ighv2-9-1A0A075B697 116 aa8.3□□□□□ -1.08
Col6a6-202ENSMUST00000098441 Ighv1-59A0A0A6YXE0 117 aa8.3□□□□□ -1.08
Col6a6-202ENSMUST00000098441 4930556J24RikQ9D4U7 146 aa8.3□□□□□ -1.08
Col6a6-202ENSMUST00000098441 Bahcc1Q3UHR0 2643 aa8.29□□□□□ -1.08
Col6a6-202ENSMUST00000098441 Ube2d1P61080 147 aaKnown RBP8.29□□□□□ -1.08
Col6a6-202ENSMUST00000098441 SycnQ8VCK7 134 aa8.29□□□□□ -1.08
Col6a6-202ENSMUST00000098441 CnfnQ6PCW6 111 aa8.28□□□□□ -1.08
Col6a6-202ENSMUST00000098441 Gm9913Q8BQQ2 135 aa8.28□□□□□ -1.08
Col6a6-202ENSMUST00000098441 1520401A03RikA0A0J9YVH6 598 aa8.28□□□□□ -1.08
Col6a6-202ENSMUST00000098441 Gm20708H3BKF4 155 aa8.27□□□□□ -1.09
Col6a6-202ENSMUST00000098441 2010109I03RikQ9CQ11 111 aa8.27□□□□□ -1.09
Col6a6-202ENSMUST00000098441 2310009B15RikA0A0A6YWI4 143 aa8.27□□□□□ -1.09
Col6a6-202ENSMUST00000098441 C130032M10RikQ8C888 123 aa8.27□□□□□ -1.09
Col6a6-202ENSMUST00000098441 Pla2g2dQ9WVF6 144 aa8.27□□□□□ -1.09
Col6a6-202ENSMUST00000098441 Ighv8-11A0A075B5X4 119 aa8.27□□□□□ -1.09
Col6a6-202ENSMUST00000098441 Cep192E9Q4Y4 2514 aaKnown RBP8.27□□□□□ -1.09
Col6a6-202ENSMUST00000098441 Gm4707V9GXN5 68 aa8.26□□□□□ -1.09
Col6a6-202ENSMUST00000098441 Smr3aQ61900 147 aa8.26□□□□□ -1.09
Col6a6-202ENSMUST00000098441 Defb40Q70KL2 73 aa8.26□□□□□ -1.09
Col6a6-202ENSMUST00000098441 CicQ924A2 2510 aa8.26□□□□□ -1.09
Col6a6-202ENSMUST00000098441 Ighv2-3A0A075B696 115 aa8.26□□□□□ -1.09
Col6a6-202ENSMUST00000098441 4930535I16RikQ9CUI2 172 aa8.25□□□□□ -1.09
Col6a6-202ENSMUST00000098441 MsmpB1AWI6 139 aa8.25□□□□□ -1.09
Col6a6-202ENSMUST00000098441 Col4a6B1AVK5 1691 aa8.24□□□□□ -1.09
Col6a6-202ENSMUST00000098441 Wfdc6bF6ULY1 148 aa8.24□□□□□ -1.09
Col6a6-202ENSMUST00000098441 Ifitm6A0A1B0GS75 124 aa8.23□□□□□ -1.09
Col6a6-202ENSMUST00000098441 LhbO09108 141 aa8.23□□□□□ -1.09
Col6a6-202ENSMUST00000098441 TshbP12656 138 aa8.23□□□□□ -1.09
Col6a6-202ENSMUST00000098441 Spint4Q9D263 159 aa8.23□□□□□ -1.09
Col6a6-202ENSMUST00000098441 Polr2kQ63871 58 aa8.23□□□□□ -1.09
Col6a6-202ENSMUST00000098441 TeppQ6IMH0 216 aa8.23□□□□□ -1.09
Col6a6-202ENSMUST00000098441 Gm12057A0A087WR21 115 aa8.22□□□□□ -1.09
Col6a6-202ENSMUST00000098441 Gm12216A0A1W2P827 62 aa8.22□□□□□ -1.09
Col6a6-202ENSMUST00000098441 4930524J08RikQ9CUJ5 163 aa8.22□□□□□ -1.09
Col6a6-202ENSMUST00000098441 Rps28P62858 69 aaKnown RBP8.22□□□□□ -1.09
Col6a6-202ENSMUST00000098441 Prrc2cQ3TLH4 2846 aaKnown RBP8.22□□□□□ -1.09
Col6a6-202ENSMUST00000098441 Nupr2Q497P3 102 aa8.21□□□□□ -1.09
Col6a6-202ENSMUST00000098441 ScxQ64124 207 aa8.21□□□□□ -1.09
Col6a6-202ENSMUST00000098441 1700011M02RikB1AX35 88 aa8.21□□□□□ -1.1
Col6a6-202ENSMUST00000098441 Gm8439G3UWA7 96 aa8.21□□□□□ -1.1
Col6a6-202ENSMUST00000098441 P06329 120 aa8.21□□□□□ -1.1
Col6a6-202ENSMUST00000098441 Ovol3D3YYM0 189 aa8.2□□□□□ -1.1
Col6a6-202ENSMUST00000098441 Gm10267M0QWD8 85 aa8.2□□□□□ -1.1
Col6a6-202ENSMUST00000098441 Gm10509O88255 85 aa8.2□□□□□ -1.1
Col6a6-202ENSMUST00000098441 Igkv8-19A0A0G2JFN8 121 aa8.2□□□□□ -1.1
Col6a6-202ENSMUST00000098441 Wfdc13Q5DQQ6 81 aa8.19□□□□□ -1.1
Col6a6-202ENSMUST00000098441 Ighv1-72P01751 139 aa8.19□□□□□ -1.1
Col6a6-202ENSMUST00000098441 Wfdc12Q9JHY3 85 aa8.19□□□□□ -1.1
Col6a6-202ENSMUST00000098441 Cdc42se2Q8BGH7 84 aa8.19□□□□□ -1.1
Col6a6-202ENSMUST00000098441 Gm10549Q3URY4 149 aa8.18□□□□□ -1.1
Col6a6-202ENSMUST00000098441 Gm10845Q3UNY9 185 aa8.18□□□□□ -1.1
Col6a6-202ENSMUST00000098441 Fhl2O70433 279 aa8.18□□□□□ -1.1
Col6a6-202ENSMUST00000098441 Coa6Q8BGD8 79 aa8.18□□□□□ -1.1
Col6a6-202ENSMUST00000098441 CrygeQ03740 174 aa8.18□□□□□ -1.1
Col6a6-202ENSMUST00000098441 CrygfQ9CXV3 174 aa8.18□□□□□ -1.1
Col6a6-202ENSMUST00000098441 Lmo4P61969 165 aa8.18□□□□□ -1.1
Col6a6-202ENSMUST00000098441 E130116L18RikQ8BMV6 101 aa8.18□□□□□ -1.1
Col6a6-202ENSMUST00000098441 Spry4Q9WTP2 300 aa8.18□□□□□ -1.1
Col6a6-202ENSMUST00000098441 Trbv13-2A0A140T8N6 113 aa8.18□□□□□ -1.1
Col6a6-202ENSMUST00000098441 Gm17606F6ZL36 78 aa8.17□□□□□ -1.1
Col6a6-202ENSMUST00000098441 Ly6c2P0CW03 131 aa8.17□□□□□ -1.1
Col6a6-202ENSMUST00000098441 Gm10490F6VBM2 120 aa8.17□□□□□ -1.1
Col6a6-202ENSMUST00000098441 Shisa2Q8QZV2 295 aa8.17□□□□□ -1.1
Col6a6-202ENSMUST00000098441 Mp68P56379 58 aa8.17□□□□□ -1.1
Col6a6-202ENSMUST00000098441 Gm16223Q8CBM3 117 aa8.17□□□□□ -1.1
Col6a6-202ENSMUST00000098441 Gm10226O88253 85 aa8.16□□□□□ -1.1
Col6a6-202ENSMUST00000098441 Ntn5Q3UQ22 452 aa8.16□□□□□ -1.1
Col6a6-202ENSMUST00000098441 P01755 137 aa8.16□□□□□ -1.1
Col6a6-202ENSMUST00000098441 Notch1Q01705 2531 aa8.15□□□□□ -1.1
Col6a6-202ENSMUST00000098441 Limd2Q8BGB5 128 aa8.15□□□□□ -1.1
Col6a6-202ENSMUST00000098441 Gm10570F6VB42 170 aa8.14□□□□□ -1.11
Col6a6-202ENSMUST00000098441 Pip4p1Q3TWL2 284 aa8.14□□□□□ -1.11
Col6a6-202ENSMUST00000098441 Defb42Q8BVB5 75 aa8.14□□□□□ -1.11
Col6a6-202ENSMUST00000098441 Gm5142Q8C5X9 133 aa8.14□□□□□ -1.11
Col6a6-202ENSMUST00000098441 Gm5153P01627 120 aa8.14□□□□□ -1.11
Col6a6-202ENSMUST00000098441 SbsponQ3UPR9 264 aa8.14□□□□□ -1.11
Col6a6-202ENSMUST00000098441 SrarpQ3ULG3 163 aa8.14□□□□□ -1.11
Col6a6-202ENSMUST00000098441 PrlhG3UWC3 86 aa8.13□□□□□ -1.11
Col6a6-202ENSMUST00000098441 1700056E22RikF7CNM6 234 aa8.12□□□□□ -1.11
Col6a6-202ENSMUST00000098441 Gm20538F6Z9R1 75 aa8.12□□□□□ -1.11
Col6a6-202ENSMUST00000098441 SnurfQ9WU12 71 aa8.12□□□□□ -1.11
Col6a6-202ENSMUST00000098441 Pla2g1bQ9Z0Y2 146 aa8.12□□□□□ -1.11
Col6a6-202ENSMUST00000098441 Krtap27-1E9PX37 202 aa8.11□□□□□ -1.11
Col6a6-202ENSMUST00000098441 Col27a1Q5QNQ9 1845 aa8.1□□□□□ -1.11
Col6a6-202ENSMUST00000098441 Ighv2-9A0A075B5Q5 116 aa8.1□□□□□ -1.11
Retrieved 100 of 22,080 RNA–protein pairs in 64.8 ms