RNA–Protein interactions for RNA: ENSMUST00000070797.6

Pcdha1-201, Transcript of Protocadherin alpha 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Pcdha1, Length 5,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-201ENSMUST00000070797 Gm5464Q3UY29 175 aa10.55□□□□□ -0.72
Pcdha1-201ENSMUST00000070797 Defb40Q70KL2 73 aa10.55□□□□□ -0.72
Pcdha1-201ENSMUST00000070797 PlaurP35456 327 aa10.54□□□□□ -0.72
Pcdha1-201ENSMUST00000070797 Coa6Q8BGD8 79 aa10.54□□□□□ -0.72
Pcdha1-201ENSMUST00000070797 Wisp2Q9Z0G4 251 aa10.54□□□□□ -0.72
Pcdha1-201ENSMUST00000070797 Wfdc12Q9JHY3 85 aa10.53□□□□□ -0.72
Pcdha1-201ENSMUST00000070797 Igkv3-4A0A140T8Q4 119 aa10.52□□□□□ -0.72
Pcdha1-201ENSMUST00000070797 1700012A03RikQ9DAF1 130 aa10.52□□□□□ -0.72
Pcdha1-201ENSMUST00000070797 Prrc2aQ7TSC1 2158 aaKnown RBP10.52□□□□□ -0.72
Pcdha1-201ENSMUST00000070797 Defb13Q8R2I4 64 aa10.52□□□□□ -0.73
Pcdha1-201ENSMUST00000070797 Obox2E9PXV9 151 aa10.51□□□□□ -0.73
Pcdha1-201ENSMUST00000070797 Defb42Q8BVB5 75 aa10.51□□□□□ -0.73
Pcdha1-201ENSMUST00000070797 P06329 120 aa10.51□□□□□ -0.73
Pcdha1-201ENSMUST00000070797 A530084C06RikQ3UTW2 186 aa10.51□□□□□ -0.73
Pcdha1-201ENSMUST00000070797 Igkv3-10A0A0G2JGN0 119 aa10.51□□□□□ -0.73
Pcdha1-201ENSMUST00000070797 Zfand2aQ9JII7 171 aa10.51□□□□□ -0.73
Pcdha1-201ENSMUST00000070797 Gm9573F7C950 1606 aa10.5□□□□□ -0.73
Pcdha1-201ENSMUST00000070797 Lce6aD3YV94 81 aa10.5□□□□□ -0.73
Pcdha1-201ENSMUST00000070797 Q8K1L6 76 aa10.5□□□□□ -0.73
Pcdha1-201ENSMUST00000070797 Ighv2-2A0A075B5P8 116 aa10.5□□□□□ -0.73
Pcdha1-201ENSMUST00000070797 P01821 116 aa10.5□□□□□ -0.73
Pcdha1-201ENSMUST00000070797 Gm10197F6QEY5 67 aa10.49□□□□□ -0.73
Pcdha1-201ENSMUST00000070797 Abca4O35600 2310 aa10.49□□□□□ -0.73
Pcdha1-201ENSMUST00000070797 E130114P18RikF6S0S7 154 aa10.49□□□□□ -0.73
Pcdha1-201ENSMUST00000070797 Lrp4Q8VI56 1905 aa10.49□□□□□ -0.73
Pcdha1-201ENSMUST00000070797 Gm9922Q8C3P1 144 aa10.49□□□□□ -0.73
Pcdha1-201ENSMUST00000070797 1700074P13RikQ9D9G7 251 aa10.49□□□□□ -0.73
Pcdha1-201ENSMUST00000070797 PrlhG3UWC3 86 aa10.48□□□□□ -0.73
Pcdha1-201ENSMUST00000070797 Gm9925F6T2U3 160 aa10.47□□□□□ -0.73
Pcdha1-201ENSMUST00000070797 Ighv2-9A0A075B5Q5 116 aa10.46□□□□□ -0.73
Pcdha1-201ENSMUST00000070797 AI854703Q8BIN3 203 aa10.46□□□□□ -0.74
Pcdha1-201ENSMUST00000070797 Wfdc10Q3V2J9 124 aa10.45□□□□□ -0.74
Pcdha1-201ENSMUST00000070797 Igkv3-3A0A140T8Q0 119 aa10.45□□□□□ -0.74
Pcdha1-201ENSMUST00000070797 P84750 121 aa10.45□□□□□ -0.74
Pcdha1-201ENSMUST00000070797 Gm10300Q8C8P7 189 aa10.45□□□□□ -0.74
Pcdha1-201ENSMUST00000070797 Gm8439G3UWA7 96 aa10.44□□□□□ -0.74
Pcdha1-201ENSMUST00000070797 7530416G11RikJ3QJX6 159 aa10.44□□□□□ -0.74
Pcdha1-201ENSMUST00000070797 Ly6c2P0CW03 131 aa10.43□□□□□ -0.74
Pcdha1-201ENSMUST00000070797 Gpha2Q925Q5 128 aa10.43□□□□□ -0.74
Pcdha1-201ENSMUST00000070797 CrygeQ03740 174 aa10.42□□□□□ -0.74
Pcdha1-201ENSMUST00000070797 Znf580Q9DB38 172 aa10.42□□□□□ -0.74
Pcdha1-201ENSMUST00000070797 Pcsk5Q04592 1877 aa10.42□□□□□ -0.74
Pcdha1-201ENSMUST00000070797 F5O88783 2183 aa10.42□□□□□ -0.74
Pcdha1-201ENSMUST00000070797 Ccdc179J3QM76 67 aa10.42□□□□□ -0.74
Pcdha1-201ENSMUST00000070797 Pla2g2cP48076 150 aa10.42□□□□□ -0.74
Pcdha1-201ENSMUST00000070797 Odf3l2Q3TZ65 277 aa10.42□□□□□ -0.74
Pcdha1-201ENSMUST00000070797 Cd164l2Q9D6W7 172 aa10.42□□□□□ -0.74
Pcdha1-201ENSMUST00000070797 Gm9887F6RFI0 207 aa10.41□□□□□ -0.74
Pcdha1-201ENSMUST00000070797 Gm17509Q9CZ61 145 aa10.41□□□□□ -0.74
Pcdha1-201ENSMUST00000070797 A0A286YCN5 57 aa10.41□□□□□ -0.74
Pcdha1-201ENSMUST00000070797 A930009A15RikG3UYI6 118 aa10.41□□□□□ -0.74
Pcdha1-201ENSMUST00000070797 Wnk1P83741 2377 aa10.41□□□□□ -0.74
Pcdha1-201ENSMUST00000070797 Cspg4Q8VHY0 2327 aa10.4□□□□□ -0.74
Pcdha1-201ENSMUST00000070797 Igkv8-21A0A140T8P7 120 aa10.4□□□□□ -0.74
Pcdha1-201ENSMUST00000070797 Gm10308Q9CVR5 141 aa10.4□□□□□ -0.75
Pcdha1-201ENSMUST00000070797 P01819 144 aa10.39□□□□□ -0.75
Pcdha1-201ENSMUST00000070797 PtprbB2RU80 1998 aa10.39□□□□□ -0.75
Pcdha1-201ENSMUST00000070797 Spg11Q3UHA3 2430 aa10.39□□□□□ -0.75
Pcdha1-201ENSMUST00000070797 Znf575Q3TXZ1 239 aa10.38□□□□□ -0.75
Pcdha1-201ENSMUST00000070797 Gm10267M0QWD8 85 aa10.38□□□□□ -0.75
Pcdha1-201ENSMUST00000070797 Prr9Q8BV84 116 aa10.38□□□□□ -0.75
Pcdha1-201ENSMUST00000070797 Q9DAA7 145 aa10.37□□□□□ -0.75
Pcdha1-201ENSMUST00000070797 FshbQ60687 130 aa10.37□□□□□ -0.75
Pcdha1-201ENSMUST00000070797 Dopey1Q8BL99 2399 aa10.37□□□□□ -0.75
Pcdha1-201ENSMUST00000070797 Nav2E9Q842 2432 aa10.36□□□□□ -0.75
Pcdha1-201ENSMUST00000070797 Sostdc1Q9CQN4 206 aa10.36□□□□□ -0.75
Pcdha1-201ENSMUST00000070797 Znf706Q9D115 76 aaKnown RBP10.36□□□□□ -0.75
Pcdha1-201ENSMUST00000070797 Pla2g1bQ9Z0Y2 146 aa10.35□□□□□ -0.75
Pcdha1-201ENSMUST00000070797 2310034G01RikA0A286YDL3 209 aa10.35□□□□□ -0.75
Pcdha1-201ENSMUST00000070797 AcacbE9Q4Z2 2448 aa10.35□□□□□ -0.75
Pcdha1-201ENSMUST00000070797 Fam19a3Q7TPG6 132 aa10.35□□□□□ -0.75
Pcdha1-201ENSMUST00000070797 Kiaa1549Q68FD9 1940 aa10.35□□□□□ -0.75
Pcdha1-201ENSMUST00000070797 Arhgap32Q811P8 2089 aa10.34□□□□□ -0.75
Pcdha1-201ENSMUST00000070797 Rif1Q6PR54 2419 aaKnown RBP10.33□□□□□ -0.76
Pcdha1-201ENSMUST00000070797 Gm43218A0A0G2JGT0 114 aa10.33□□□□□ -0.76
Pcdha1-201ENSMUST00000070797 Notch3Q61982 2318 aa10.33□□□□□ -0.76
Pcdha1-201ENSMUST00000070797 Igkv8-27A0A0G2JF28 120 aa10.33□□□□□ -0.76
Pcdha1-201ENSMUST00000070797 Igkv8-30A0A140T8M3 121 aa10.33□□□□□ -0.76
Pcdha1-201ENSMUST00000070797 Gm3443F7CCV5 94 aa10.32□□□□□ -0.76
Pcdha1-201ENSMUST00000070797 Col5a1O88207 1838 aa10.31□□□□□ -0.76
Pcdha1-201ENSMUST00000070797 Wfdc15aQ8BH89 80 aa10.3□□□□□ -0.76
Pcdha1-201ENSMUST00000070797 Col27a1Q5QNQ9 1845 aa10.3□□□□□ -0.76
Pcdha1-201ENSMUST00000070797 Gm4707V9GXN5 68 aa10.3□□□□□ -0.76
Pcdha1-201ENSMUST00000070797 Piezo1E2JF22 2547 aa10.3□□□□□ -0.76
Pcdha1-201ENSMUST00000070797 Cdc42se1Q8BHL7 80 aa10.3□□□□□ -0.76
Pcdha1-201ENSMUST00000070797 Col4a4Q9QZR9 1682 aa10.29□□□□□ -0.76
Pcdha1-201ENSMUST00000070797 SycnQ8VCK7 134 aa10.29□□□□□ -0.76
Pcdha1-201ENSMUST00000070797 Mrpl34Q99N91 92 aa10.28□□□□□ -0.76
Pcdha1-201ENSMUST00000070797 Cox6a2P43023 97 aa10.27□□□□□ -0.76
Pcdha1-201ENSMUST00000070797 Zfyve26Q5DU37 2529 aa10.27□□□□□ -0.77
Pcdha1-201ENSMUST00000070797 Limd2Q8BGB5 128 aa10.27□□□□□ -0.77
Pcdha1-201ENSMUST00000070797 Med13lQ6JPI3 2207 aa10.26□□□□□ -0.77
Pcdha1-201ENSMUST00000070797 CrygaP04345 174 aa10.26□□□□□ -0.77
Pcdha1-201ENSMUST00000070797 Wfdc13Q5DQQ6 81 aa10.26□□□□□ -0.77
Pcdha1-201ENSMUST00000070797 4930519P11RikQ9CUJ8 166 aa10.26□□□□□ -0.77
Pcdha1-201ENSMUST00000070797 6430550D23RikE9Q1X6 194 aa10.25□□□□□ -0.77
Pcdha1-201ENSMUST00000070797 Ighv8-13A0A075B5Y0 101 aa10.25□□□□□ -0.77
Pcdha1-201ENSMUST00000070797 C130032M10RikQ8C888 123 aa10.25□□□□□ -0.77
Pcdha1-201ENSMUST00000070797 U90926O08546 118 aa10.24□□□□□ -0.77
Pcdha1-201ENSMUST00000070797 Gm10643Q3URG9 111 aa10.24□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 69.6 ms