RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Pip4p1Q3TWL2 284 aa8.83□□□□□ -1
Trim56-201ENSMUST00000054384 Chchd7Q8K2Q5 85 aa8.83□□□□□ -1
Trim56-201ENSMUST00000054384 Ube2d2P62838 147 aa8.82□□□□□ -1
Trim56-201ENSMUST00000054384 Rbx1P62878 108 aa8.82□□□□□ -1
Trim56-201ENSMUST00000054384 P01755 137 aa8.82□□□□□ -1
Trim56-201ENSMUST00000054384 Gm10267M0QWD8 85 aa8.82□□□□□ -1
Trim56-201ENSMUST00000054384 Znf239P24399 201 aa8.82□□□□□ -1
Trim56-201ENSMUST00000054384 Lmo4P61969 165 aa8.81□□□□□ -1
Trim56-201ENSMUST00000054384 Wfdc3Q14AE4 130 aa8.81□□□□□ -1
Trim56-201ENSMUST00000054384 Zfp462B1AWL2 2495 aaKnown RBP8.81□□□□□ -1
Trim56-201ENSMUST00000054384 Ovol3D3YYM0 189 aa8.81□□□□□ -1
Trim56-201ENSMUST00000054384 A830031A19RikQ8BNT5 113 aa8.81□□□□□ -1
Trim56-201ENSMUST00000054384 P06329 120 aa8.8□□□□□ -1
Trim56-201ENSMUST00000054384 Gm10322F7D7I4 111 aa8.8□□□□□ -1
Trim56-201ENSMUST00000054384 Col4a4Q9QZR9 1682 aa8.8□□□□□ -1
Trim56-201ENSMUST00000054384 A0A286YCN5 57 aa8.8□□□□□ -1
Trim56-201ENSMUST00000054384 E130116L18RikQ8BMV6 101 aa8.8□□□□□ -1
Trim56-201ENSMUST00000054384 Ighv1-66A0A075B5X5 117 aa8.79□□□□□ -1
Trim56-201ENSMUST00000054384 PrlhG3UWC3 86 aa8.79□□□□□ -1
Trim56-201ENSMUST00000054384 Gpha2Q925Q5 128 aa8.79□□□□□ -1
Trim56-201ENSMUST00000054384 Ttc28Q80XJ3 2450 aa8.78□□□□□ -1
Trim56-201ENSMUST00000054384 Gm10226O88253 85 aa8.78□□□□□ -1
Trim56-201ENSMUST00000054384 Ypel4Q65Z93 127 aa8.78□□□□□ -1
Trim56-201ENSMUST00000054384 C130032M10RikQ8C888 123 aa8.78□□□□□ -1
Trim56-201ENSMUST00000054384 Gm12057A0A087WR21 115 aa8.78□□□□□ -1
Trim56-201ENSMUST00000054384 Gm16223Q8CBM3 117 aa8.78□□□□□ -1
Trim56-201ENSMUST00000054384 1700011M02RikB1AX35 88 aa8.77□□□□□ -1.01
Trim56-201ENSMUST00000054384 Sprr2jO70561 109 aa8.77□□□□□ -1.01
Trim56-201ENSMUST00000054384 Gm10490F6VBM2 120 aa8.76□□□□□ -1.01
Trim56-201ENSMUST00000054384 TeppQ6IMH0 216 aa8.76□□□□□ -1.01
Trim56-201ENSMUST00000054384 Fhl2O70433 279 aa8.76□□□□□ -1.01
Trim56-201ENSMUST00000054384 Shisa2Q8QZV2 295 aa8.76□□□□□ -1.01
Trim56-201ENSMUST00000054384 Cd27P41272 250 aa8.75□□□□□ -1.01
Trim56-201ENSMUST00000054384 SbsponQ3UPR9 264 aa8.75□□□□□ -1.01
Trim56-201ENSMUST00000054384 Igkv8-19A0A0G2JFN8 121 aa8.75□□□□□ -1.01
Trim56-201ENSMUST00000054384 Ifitm6A0A1B0GS75 124 aa8.74□□□□□ -1.01
Trim56-201ENSMUST00000054384 4930556J24RikQ9D4U7 146 aa8.74□□□□□ -1.01
Trim56-201ENSMUST00000054384 Pla2g1bQ9Z0Y2 146 aa8.74□□□□□ -1.01
Trim56-201ENSMUST00000054384 Crip2Q9DCT8 208 aaKnown RBP8.73□□□□□ -1.01
Trim56-201ENSMUST00000054384 Ighv2-9-1A0A075B697 116 aa8.73□□□□□ -1.01
Trim56-201ENSMUST00000054384 Defb38Q7TNV7 63 aa8.73□□□□□ -1.01
Trim56-201ENSMUST00000054384 Trbv13-2A0A140T8N6 113 aa8.73□□□□□ -1.01
Trim56-201ENSMUST00000054384 Gm9925F6T2U3 160 aa8.73□□□□□ -1.01
Trim56-201ENSMUST00000054384 Gm10509O88255 85 aa8.72□□□□□ -1.01
Trim56-201ENSMUST00000054384 Gm21748Q3UE70 102 aa8.72□□□□□ -1.01
Trim56-201ENSMUST00000054384 Ankhd1E9PUR0 2548 aaKnown RBP8.72□□□□□ -1.01
Trim56-201ENSMUST00000054384 Defb42Q8BVB5 75 aa8.72□□□□□ -1.01
Trim56-201ENSMUST00000054384 Adm2Q7TNK8 150 aa8.72□□□□□ -1.01
Trim56-201ENSMUST00000054384 Cdc42se2Q8BGH7 84 aa8.71□□□□□ -1.02
Trim56-201ENSMUST00000054384 CrygfQ9CXV3 174 aa8.7□□□□□ -1.02
Trim56-201ENSMUST00000054384 Polr2kQ63871 58 aa8.7□□□□□ -1.02
Trim56-201ENSMUST00000054384 Gm8439G3UWA7 96 aa8.69□□□□□ -1.02
Trim56-201ENSMUST00000054384 CnfnQ6PCW6 111 aa8.69□□□□□ -1.02
Trim56-201ENSMUST00000054384 4930524J08RikQ9CUJ5 163 aa8.69□□□□□ -1.02
Trim56-201ENSMUST00000054384 Col27a1Q5QNQ9 1845 aa8.68□□□□□ -1.02
Trim56-201ENSMUST00000054384 UqcrqQ9CQ69 82 aa8.68□□□□□ -1.02
Trim56-201ENSMUST00000054384 AvpP35455 168 aa8.68□□□□□ -1.02
Trim56-201ENSMUST00000054384 Tln1P26039 2541 aaKnown RBP8.68□□□□□ -1.02
Trim56-201ENSMUST00000054384 Cyyr1Q8VIH7 165 aa8.67□□□□□ -1.02
Trim56-201ENSMUST00000054384 Gm17606F6ZL36 78 aa8.67□□□□□ -1.02
Trim56-201ENSMUST00000054384 SrarpQ3ULG3 163 aa8.67□□□□□ -1.02
Trim56-201ENSMUST00000054384 CdsnQ7TPC1 561 aa8.66□□□□□ -1.02
Trim56-201ENSMUST00000054384 Gm5142Q8C5X9 133 aa8.66□□□□□ -1.02
Trim56-201ENSMUST00000054384 CrygeQ03740 174 aa8.66□□□□□ -1.02
Trim56-201ENSMUST00000054384 Gm10570F6VB42 170 aa8.66□□□□□ -1.02
Trim56-201ENSMUST00000054384 Wfdc17Q5SSJ1 76 aa8.65□□□□□ -1.02
Trim56-201ENSMUST00000054384 Wisp2Q9Z0G4 251 aa8.65□□□□□ -1.02
Trim56-201ENSMUST00000054384 1600014C23RikQ9DAX4 101 aa8.64□□□□□ -1.03
Trim56-201ENSMUST00000054384 Gm9922Q8C3P1 144 aa8.64□□□□□ -1.03
Trim56-201ENSMUST00000054384 1700056E22RikF7CNM6 234 aa8.63□□□□□ -1.03
Trim56-201ENSMUST00000054384 Gm26566Q8CAC1 153 aa8.63□□□□□ -1.03
Trim56-201ENSMUST00000054384 Gm17509Q9CZ61 145 aa8.63□□□□□ -1.03
Trim56-201ENSMUST00000054384 Piezo2Q8CD54 2822 aa8.63□□□□□ -1.03
Trim56-201ENSMUST00000054384 2310009B15RikA0A0A6YWI4 143 aa8.61□□□□□ -1.03
Trim56-201ENSMUST00000054384 Ighv1-56A0A0A6YXG2 117 aa8.6□□□□□ -1.03
Trim56-201ENSMUST00000054384 Ighv8-13A0A075B5Y0 101 aa8.6□□□□□ -1.03
Trim56-201ENSMUST00000054384 D730001G18RikA0A087WQU7 115 aa8.6□□□□□ -1.03
Trim56-201ENSMUST00000054384 Gm12216A0A1W2P827 62 aa8.6□□□□□ -1.03
Trim56-201ENSMUST00000054384 Krtap27-1E9PX37 202 aa8.6□□□□□ -1.03
Trim56-201ENSMUST00000054384 4930432M17RikQ3V0W9 174 aa8.6□□□□□ -1.03
Trim56-201ENSMUST00000054384 Gm28230A0A0A0MQ91 144 aa8.6□□□□□ -1.03
Trim56-201ENSMUST00000054384 Ptpn13Q64512 2453 aa8.6□□□□□ -1.03
Trim56-201ENSMUST00000054384 Ly6g6cQ9Z1Q4 126 aa8.59□□□□□ -1.03
Trim56-201ENSMUST00000054384 Lce6aD3YV94 81 aa8.59□□□□□ -1.03
Trim56-201ENSMUST00000054384 Gm10845Q3UNY9 185 aa8.59□□□□□ -1.03
Trim56-201ENSMUST00000054384 Gm5153P01627 120 aa8.59□□□□□ -1.03
Trim56-201ENSMUST00000054384 Ntn5Q3UQ22 452 aa8.58□□□□□ -1.04
Trim56-201ENSMUST00000054384 Bean1Q9EQG5 255 aa8.58□□□□□ -1.04
Trim56-201ENSMUST00000054384 SnurfQ9WU12 71 aa8.58□□□□□ -1.04
Trim56-201ENSMUST00000054384 B230217C12RikE9Q3Z1 139 aa8.57□□□□□ -1.04
Trim56-201ENSMUST00000054384 Gm28374F6SG70 93 aa8.57□□□□□ -1.04
Trim56-201ENSMUST00000054384 Ighv2-9A0A075B5Q5 116 aa8.57□□□□□ -1.04
Trim56-201ENSMUST00000054384 Csdc2Q91YQ3 154 aa8.57□□□□□ -1.04
Trim56-201ENSMUST00000054384 Gm10549Q3URY4 149 aa8.55□□□□□ -1.04
Trim56-201ENSMUST00000054384 Zfand2aQ9JII7 171 aa8.55□□□□□ -1.04
Trim56-201ENSMUST00000054384 Setd2E9Q5F9 2537 aa8.55□□□□□ -1.04
Trim56-201ENSMUST00000054384 Gm9767G3X930 207 aa8.55□□□□□ -1.04
Trim56-201ENSMUST00000054384 A930009A15RikG3UYI6 118 aa8.54□□□□□ -1.04
Trim56-201ENSMUST00000054384 4930518I15RikQ3V2W7 57 aa8.54□□□□□ -1.04
Trim56-201ENSMUST00000054384 Pla2g2cP48076 150 aa8.53□□□□□ -1.04
Retrieved 100 of 22,080 RNA–protein pairs in 55.3 ms