RNA–Protein interactions for RNA: ENSMUST00000213813.1

Ccdc84-202, Transcript of Coiled-coil domain-containing protein 84, mousemouse

TSL 1 (best) BASIC

Gene Ccdc84, Length 2,675 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc84-202ENSMUST00000213813 Spink1P09036 80 aa11.53□□□□□ -0.56
Ccdc84-202ENSMUST00000213813 Trav13n-1A0A0G2JEU8 110 aa11.52□□□□□ -0.57
Ccdc84-202ENSMUST00000213813 Gm7075D3Z497 112 aa11.52□□□□□ -0.57
Ccdc84-202ENSMUST00000213813 P01729 129 aa11.52□□□□□ -0.57
Ccdc84-202ENSMUST00000213813 Ube2wQ8VDW4 151 aa11.52□□□□□ -0.57
Ccdc84-202ENSMUST00000213813 Defb42Q8BVB5 75 aa11.51□□□□□ -0.57
Ccdc84-202ENSMUST00000213813 Lypd5Q9D7Z7 256 aa11.51□□□□□ -0.57
Ccdc84-202ENSMUST00000213813 Rpl36aP83882 106 aaKnown RBP11.5□□□□□ -0.57
Ccdc84-202ENSMUST00000213813 RetnQ99P87 114 aa11.5□□□□□ -0.57
Ccdc84-202ENSMUST00000213813 Nf1Q04690 2841 aa11.5□□□□□ -0.57
Ccdc84-202ENSMUST00000213813 CirbpP60824 172 aaKnown RBP11.5□□□□□ -0.57
Ccdc84-202ENSMUST00000213813 Gm10767Q3TQP0 103 aa11.49□□□□□ -0.57
Ccdc84-202ENSMUST00000213813 Gm10300Q8C8P7 189 aa11.49□□□□□ -0.57
Ccdc84-202ENSMUST00000213813 1700010B08RikQ9DAI7 102 aa11.49□□□□□ -0.57
Ccdc84-202ENSMUST00000213813 Morn3Q8C5T4 241 aa11.49□□□□□ -0.57
Ccdc84-202ENSMUST00000213813 Muc2Q80Z19 2680 aa11.48□□□□□ -0.57
Ccdc84-202ENSMUST00000213813 Cox6cQ9CPQ1 76 aa11.48□□□□□ -0.57
Ccdc84-202ENSMUST00000213813 Nop10Q9CQS2 64 aa11.48□□□□□ -0.57
Ccdc84-202ENSMUST00000213813 Lyrm7Q9DA03 104 aa11.48□□□□□ -0.57
Ccdc84-202ENSMUST00000213813 Tep1P97499 2629 aa11.48□□□□□ -0.57
Ccdc84-202ENSMUST00000213813 Xirp2Q4U4S6 3784 aa11.47□□□□□ -0.57
Ccdc84-202ENSMUST00000213813 Sostdc1Q9CQN4 206 aa11.47□□□□□ -0.57
Ccdc84-202ENSMUST00000213813 Ly6hQ9WUC3 139 aa11.47□□□□□ -0.57
Ccdc84-202ENSMUST00000213813 BsnO88737 3942 aa11.47□□□□□ -0.57
Ccdc84-202ENSMUST00000213813 Ighv1-62-1A0A075B5U3 116 aa11.47□□□□□ -0.57
Ccdc84-202ENSMUST00000213813 Prp2P05143 317 aa11.47□□□□□ -0.57
Ccdc84-202ENSMUST00000213813 Ighv1-61P01749 117 aa11.46□□□□□ -0.57
Ccdc84-202ENSMUST00000213813 Plac8l1Q08EJ0 177 aa11.46□□□□□ -0.57
Ccdc84-202ENSMUST00000213813 Cd164l2Q9D6W7 172 aa11.46□□□□□ -0.57
Ccdc84-202ENSMUST00000213813 Usp24B1AY13 2617 aaKnown RBP11.46□□□□□ -0.57
Ccdc84-202ENSMUST00000213813 Fxyd5P97808 178 aa11.46□□□□□ -0.58
Ccdc84-202ENSMUST00000213813 Gm9922Q8C3P1 144 aa11.46□□□□□ -0.58
Ccdc84-202ENSMUST00000213813 SpinklQ8CEK3 90 aa11.46□□□□□ -0.58
Ccdc84-202ENSMUST00000213813 Tfpi2O35536 230 aa11.45□□□□□ -0.58
Ccdc84-202ENSMUST00000213813 P01745 121 aa11.45□□□□□ -0.58
Ccdc84-202ENSMUST00000213813 Cdc42se2Q8BGH7 84 aa11.45□□□□□ -0.58
Ccdc84-202ENSMUST00000213813 Mrpl52Q9D0Y8 121 aa11.45□□□□□ -0.58
Ccdc84-202ENSMUST00000213813 Wdr38Q9D994 303 aa11.45□□□□□ -0.58
Ccdc84-202ENSMUST00000213813 Trav9d-3A0A075B695 113 aa11.44□□□□□ -0.58
Ccdc84-202ENSMUST00000213813 Gm26661M0QWV4 156 aa11.44□□□□□ -0.58
Ccdc84-202ENSMUST00000213813 Phpt1Q9DAK9 124 aa11.44□□□□□ -0.58
Ccdc84-202ENSMUST00000213813 Crlf1Q9JM58 425 aa11.44□□□□□ -0.58
Ccdc84-202ENSMUST00000213813 Helz2E9QAM5 2947 aaKnown RBP11.44□□□□□ -0.58
Ccdc84-202ENSMUST00000213813 Gm10251J3QPM5 127 aa11.43□□□□□ -0.58
Ccdc84-202ENSMUST00000213813 Spata25Q9DA57 226 aa11.43□□□□□ -0.58
Ccdc84-202ENSMUST00000213813 Ankrd17Q99NH0 2603 aaKnown RBP11.43□□□□□ -0.58
Ccdc84-202ENSMUST00000213813 Defb26Q30KN7 186 aa11.43□□□□□ -0.58
Ccdc84-202ENSMUST00000213813 Pdzd2E9Q1M1 2796 aa11.43□□□□□ -0.58
Ccdc84-202ENSMUST00000213813 Atp5g1Q9CR84 136 aa11.43□□□□□ -0.58
Ccdc84-202ENSMUST00000213813 Rpl35aO55142 110 aa11.42□□□□□ -0.58
Ccdc84-202ENSMUST00000213813 Defa2P28309 93 aa11.42□□□□□ -0.58
Ccdc84-202ENSMUST00000213813 Znf740Q6NZQ6 180 aa11.42□□□□□ -0.58
Ccdc84-202ENSMUST00000213813 Hectd1Q69ZR2 2618 aaKnown RBP11.41□□□□□ -0.58
Ccdc84-202ENSMUST00000213813 CrygaP04345 174 aa11.41□□□□□ -0.58
Ccdc84-202ENSMUST00000213813 Igfn1Q3KNY0 2849 aa11.41□□□□□ -0.58
Ccdc84-202ENSMUST00000213813 1700011M02RikB1AX35 88 aa11.41□□□□□ -0.58
Ccdc84-202ENSMUST00000213813 Trav13-4-dv7A0A075B6C2 110 aa11.4□□□□□ -0.59
Ccdc84-202ENSMUST00000213813 Trav9d-4A0A0G2JG37 103 aa11.4□□□□□ -0.59
Ccdc84-202ENSMUST00000213813 Lst1O08843 95 aa11.39□□□□□ -0.59
Ccdc84-202ENSMUST00000213813 Tmem213Q08EA8 116 aa11.39□□□□□ -0.59
Ccdc84-202ENSMUST00000213813 Rif1Q6PR54 2419 aaKnown RBP11.39□□□□□ -0.59
Ccdc84-202ENSMUST00000213813 4930546C10RikE9Q4Y3 121 aa11.39□□□□□ -0.59
Ccdc84-202ENSMUST00000213813 Hivep2Q3UHF7 2430 aa11.38□□□□□ -0.59
Ccdc84-202ENSMUST00000213813 4930544G11RikQ9CR99 193 aa11.38□□□□□ -0.59
Ccdc84-202ENSMUST00000213813 Ighv1-49A0A0A6YWX2 117 aa11.38□□□□□ -0.59
Ccdc84-202ENSMUST00000213813 Gm7257D3YX25 99 aa11.38□□□□□ -0.59
Ccdc84-202ENSMUST00000213813 Sh2d1aO88890 126 aa11.38□□□□□ -0.59
Ccdc84-202ENSMUST00000213813 Cox7a1P56392 80 aa11.38□□□□□ -0.59
Ccdc84-202ENSMUST00000213813 SelenowP63300 88 aa11.37□□□□□ -0.59
Ccdc84-202ENSMUST00000213813 Defb2P82020 71 aa11.37□□□□□ -0.59
Ccdc84-202ENSMUST00000213813 Cops9Q3U898 57 aa11.37□□□□□ -0.59
Ccdc84-202ENSMUST00000213813 Gm10772F7AIG4 85 aa11.36□□□□□ -0.59
Ccdc84-202ENSMUST00000213813 Gm904Q3V2L5 102 aa11.36□□□□□ -0.59
Ccdc84-202ENSMUST00000213813 Chchd7Q8K2Q5 85 aa11.36□□□□□ -0.59
Ccdc84-202ENSMUST00000213813 9430069I07RikQ9CX21 111 aa11.36□□□□□ -0.59
Ccdc84-202ENSMUST00000213813 Spry2Q9QXV8 315 aa11.36□□□□□ -0.59
Ccdc84-202ENSMUST00000213813 Ank2Q8C8R3 3898 aa11.36□□□□□ -0.59
Ccdc84-202ENSMUST00000213813 Trav11A0A0B4J1J9 114 aa11.36□□□□□ -0.59
Ccdc84-202ENSMUST00000213813 Gm10577Q3UDV9 132 aa11.36□□□□□ -0.59
Ccdc84-202ENSMUST00000213813 TeppQ6IMH0 216 aa11.36□□□□□ -0.59
Ccdc84-202ENSMUST00000213813 Myo9aQ8C170 2542 aa11.36□□□□□ -0.59
Ccdc84-202ENSMUST00000213813 MalO09198 153 aa11.35□□□□□ -0.59
Ccdc84-202ENSMUST00000213813 Ppp1r32Q148A4 427 aa11.35□□□□□ -0.59
Ccdc84-202ENSMUST00000213813 Gpha2Q925Q5 128 aa11.35□□□□□ -0.59
Ccdc84-202ENSMUST00000213813 Wnk1P83741 2377 aa11.35□□□□□ -0.59
Ccdc84-202ENSMUST00000213813 PemtQ61907 199 aa11.34□□□□□ -0.59
Ccdc84-202ENSMUST00000213813 Cep192E9Q4Y4 2514 aaKnown RBP11.34□□□□□ -0.59
Ccdc84-202ENSMUST00000213813 FlnaQ8BTM8 2647 aaKnown RBP11.34□□□□□ -0.59
Ccdc84-202ENSMUST00000213813 Pglyrp4Q0VB07 374 aa11.33□□□□□ -0.59
Ccdc84-202ENSMUST00000213813 Lyrm9Q3UN90 78 aa11.33□□□□□ -0.59
Ccdc84-202ENSMUST00000213813 CdsnQ7TPC1 561 aa11.32□□□□□ -0.6
Ccdc84-202ENSMUST00000213813 Cd99Q8VCN6 175 aa11.32□□□□□ -0.6
Ccdc84-202ENSMUST00000213813 Tenm3Q9WTS6 2715 aa11.32□□□□□ -0.6
Ccdc84-202ENSMUST00000213813 Krtap16-1A2A5X5 502 aa11.32□□□□□ -0.6
Ccdc84-202ENSMUST00000213813 Gm10647E9Q8X0 124 aa11.32□□□□□ -0.6
Ccdc84-202ENSMUST00000213813 GfyJ3KML8 504 aa11.32□□□□□ -0.6
Ccdc84-202ENSMUST00000213813 Pfn2Q9JJV2 140 aa11.32□□□□□ -0.6
Ccdc84-202ENSMUST00000213813 Trav3-4A0A075B654 114 aa11.32□□□□□ -0.6
Ccdc84-202ENSMUST00000213813 Foxc1Q61572 553 aa11.32□□□□□ -0.6
Ccdc84-202ENSMUST00000213813 Apoc4Q61268 124 aa11.31□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 40.5 ms