RNA–Protein interactions for RNA: ENSMUST00000113705.7

Tpm1-215, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,759 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-215ENSMUST00000113705 Igkv3-12A0A140T8P0 119 aa10.54□□□□□ -0.72
Tpm1-215ENSMUST00000113705 Rpl36-ps4A0A140T8U4 117 aa10.54□□□□□ -0.72
Tpm1-215ENSMUST00000113705 Tmem136Q3TYE7 245 aa10.54□□□□□ -0.72
Tpm1-215ENSMUST00000113705 Atg101Q9D8Z6 218 aa10.54□□□□□ -0.72
Tpm1-215ENSMUST00000113705 Cited4Q9WUL8 182 aa10.54□□□□□ -0.72
Tpm1-215ENSMUST00000113705 Tnp2P11378 117 aa10.54□□□□□ -0.72
Tpm1-215ENSMUST00000113705 Rpl13aP19253 203 aaKnown RBP10.54□□□□□ -0.72
Tpm1-215ENSMUST00000113705 TbpP29037 316 aa10.54□□□□□ -0.72
Tpm1-215ENSMUST00000113705 Ifitm10Q8BR26 201 aa10.54□□□□□ -0.72
Tpm1-215ENSMUST00000113705 Kmt2cQ8BRH4 4903 aa10.53□□□□□ -0.72
Tpm1-215ENSMUST00000113705 Grcc10O35127 126 aa10.53□□□□□ -0.72
Tpm1-215ENSMUST00000113705 Hist1h2bfP10853 126 aa10.53□□□□□ -0.72
Tpm1-215ENSMUST00000113705 9130213A22RikQ3V3T2 120 aa10.53□□□□□ -0.72
Tpm1-215ENSMUST00000113705 Trav3-3Q5R1C3 114 aa10.53□□□□□ -0.72
Tpm1-215ENSMUST00000113705 Hist1h2bbQ64475 126 aa10.53□□□□□ -0.72
Tpm1-215ENSMUST00000113705 Hist1h2bkQ8CGP1 126 aaKnown RBP10.53□□□□□ -0.72
Tpm1-215ENSMUST00000113705 Hist1h2bpQ8CGP2 126 aaKnown RBP10.53□□□□□ -0.72
Tpm1-215ENSMUST00000113705 Ovol2Q8CIV7 274 aa10.53□□□□□ -0.72
Tpm1-215ENSMUST00000113705 Cdip1Q9DB75 208 aa10.53□□□□□ -0.72
Tpm1-215ENSMUST00000113705 Ramp1Q9WTJ5 148 aa10.53□□□□□ -0.72
Tpm1-215ENSMUST00000113705 Gm10542F6XDR3 90 aa10.52□□□□□ -0.72
Tpm1-215ENSMUST00000113705 ApobE9Q414 4505 aa10.52□□□□□ -0.73
Tpm1-215ENSMUST00000113705 Herc2Q4U2R1 4836 aa10.52□□□□□ -0.73
Tpm1-215ENSMUST00000113705 Tmem238lA0A1B0GS74 79 aa10.52□□□□□ -0.73
Tpm1-215ENSMUST00000113705 Leprotl1Q9CQ74 131 aa10.52□□□□□ -0.73
Tpm1-215ENSMUST00000113705 1700012A03RikQ9DAF1 130 aa10.52□□□□□ -0.73
Tpm1-215ENSMUST00000113705 A0A1Y7VMQ4 148 aa10.51□□□□□ -0.73
Tpm1-215ENSMUST00000113705 Tfpi2O35536 230 aa10.51□□□□□ -0.73
Tpm1-215ENSMUST00000113705 BC025920Q3US60 128 aa10.51□□□□□ -0.73
Tpm1-215ENSMUST00000113705 Ndufa12Q7TMF3 145 aaKnown RBP10.51□□□□□ -0.73
Tpm1-215ENSMUST00000113705 Prss58Q8BW11 241 aa10.51□□□□□ -0.73
Tpm1-215ENSMUST00000113705 RnasekQ8K3C0 98 aa10.51□□□□□ -0.73
Tpm1-215ENSMUST00000113705 Tmem223Q9CQE2 199 aaKnown RBP10.51□□□□□ -0.73
Tpm1-215ENSMUST00000113705 Timm10bQ9WV96 100 aa10.51□□□□□ -0.73
Tpm1-215ENSMUST00000113705 Igkv4-92A0A0B4J1I2 117 aa10.5□□□□□ -0.73
Tpm1-215ENSMUST00000113705 P01896 185 aa10.5□□□□□ -0.73
Tpm1-215ENSMUST00000113705 Ube2wQ8VDW4 151 aa10.5□□□□□ -0.73
Tpm1-215ENSMUST00000113705 Plpp2Q9DAX2 276 aa10.5□□□□□ -0.73
Tpm1-215ENSMUST00000113705 Ndufa1O35683 70 aa10.49□□□□□ -0.73
Tpm1-215ENSMUST00000113705 SpinklQ8CEK3 90 aa10.49□□□□□ -0.73
Tpm1-215ENSMUST00000113705 9430069I07RikQ9CX21 111 aa10.49□□□□□ -0.73
Tpm1-215ENSMUST00000113705 Trav13d-4A0A0G2JFX3 110 aa10.49□□□□□ -0.73
Tpm1-215ENSMUST00000113705 CnbpP53996 178 aaKnown RBP10.49□□□□□ -0.73
Tpm1-215ENSMUST00000113705 Q3UNZ8 350 aa10.49□□□□□ -0.73
Tpm1-215ENSMUST00000113705 SmagpQ99KC7 97 aa10.49□□□□□ -0.73
Tpm1-215ENSMUST00000113705 Higd1aQ9JLR9 95 aa10.49□□□□□ -0.73
Tpm1-215ENSMUST00000113705 Ighv2-9-1A0A075B697 116 aa10.48□□□□□ -0.73
Tpm1-215ENSMUST00000113705 4930546C10RikE9Q4Y3 121 aa10.48□□□□□ -0.73
Tpm1-215ENSMUST00000113705 Dnah8Q91XQ0 4731 aa10.48□□□□□ -0.73
Tpm1-215ENSMUST00000113705 4930519P11RikQ9CUJ8 166 aa10.47□□□□□ -0.73
Tpm1-215ENSMUST00000113705 1600014C23RikQ9DAX4 101 aa10.47□□□□□ -0.73
Tpm1-215ENSMUST00000113705 Trav13-4-dv7A0A075B6C2 110 aa10.46□□□□□ -0.74
Tpm1-215ENSMUST00000113705 Defa9P50707 93 aa10.46□□□□□ -0.74
Tpm1-215ENSMUST00000113705 Gm10842Q3U587 122 aa10.46□□□□□ -0.74
Tpm1-215ENSMUST00000113705 Fam241bQ9D882 120 aa10.46□□□□□ -0.74
Tpm1-215ENSMUST00000113705 Gm42420A0A0J9YUQ2 99 aa10.45□□□□□ -0.74
Tpm1-215ENSMUST00000113705 Esp24A8R0V6 68 aa10.45□□□□□ -0.74
Tpm1-215ENSMUST00000113705 Fabp4P04117 132 aa10.45□□□□□ -0.74
Tpm1-215ENSMUST00000113705 Defa10P50708 93 aa10.45□□□□□ -0.74
Tpm1-215ENSMUST00000113705 Gm5617Q91VN2 117 aa10.45□□□□□ -0.74
Tpm1-215ENSMUST00000113705 Igkv3-2A0A075B5P0 119 aa10.44□□□□□ -0.74
Tpm1-215ENSMUST00000113705 ScxQ64124 207 aa10.44□□□□□ -0.74
Tpm1-215ENSMUST00000113705 Tnfsf18Q7TS55 173 aa10.44□□□□□ -0.74
Tpm1-215ENSMUST00000113705 OtorQ9JIE3 128 aa10.44□□□□□ -0.74
Tpm1-215ENSMUST00000113705 Ctxnd2A0A1B0GQX3 59 aa10.44□□□□□ -0.74
Tpm1-215ENSMUST00000113705 Gm10130F6ZHM5 101 aa10.44□□□□□ -0.74
Tpm1-215ENSMUST00000113705 Ube2d1P61080 147 aaKnown RBP10.44□□□□□ -0.74
Tpm1-215ENSMUST00000113705 Ndufv3Q8BK30 104 aaKnown RBP10.44□□□□□ -0.74
Tpm1-215ENSMUST00000113705 Trdv2-1A0A0G2JGB9 116 aa10.43□□□□□ -0.74
Tpm1-215ENSMUST00000113705 Fgf6P21658 208 aa10.43□□□□□ -0.74
Tpm1-215ENSMUST00000113705 Vamp3P63024 103 aa10.43□□□□□ -0.74
Tpm1-215ENSMUST00000113705 H2al1nQ497L1 109 aa10.43□□□□□ -0.74
Tpm1-215ENSMUST00000113705 Birc6O88738 4882 aa10.42□□□□□ -0.74
Tpm1-215ENSMUST00000113705 Aqp7O54794 303 aa10.42□□□□□ -0.74
Tpm1-215ENSMUST00000113705 Rab24P35290 203 aa10.42□□□□□ -0.74
Tpm1-215ENSMUST00000113705 Gm1968Q3T9I3 115 aa10.42□□□□□ -0.74
Tpm1-215ENSMUST00000113705 Bsph1Q3UW26 133 aa10.42□□□□□ -0.74
Tpm1-215ENSMUST00000113705 Mfap4Q9D1H9 257 aa10.42□□□□□ -0.74
Tpm1-215ENSMUST00000113705 Fam104aA2A6P4 185 aa10.42□□□□□ -0.74
Tpm1-215ENSMUST00000113705 Timm17aQ9Z0V8 171 aa10.42□□□□□ -0.74
Tpm1-215ENSMUST00000113705 Tmem238A9JSM3 176 aa10.4□□□□□ -0.74
Tpm1-215ENSMUST00000113705 Igkv2-137A0A0B4J1H6 120 aa10.39□□□□□ -0.75
Tpm1-215ENSMUST00000113705 Gng4P50153 75 aa10.39□□□□□ -0.75
Tpm1-215ENSMUST00000113705 Gm45521A0A1B0GRK0 198 aa10.39□□□□□ -0.75
Tpm1-215ENSMUST00000113705 Gm10735Q3US96 136 aa10.39□□□□□ -0.75
Tpm1-215ENSMUST00000113705 Tmem170bP86050 132 aa10.38□□□□□ -0.75
Tpm1-215ENSMUST00000113705 Sprr1bQ62267 153 aa10.38□□□□□ -0.75
Tpm1-215ENSMUST00000113705 Gm1553Q66VB7 94 aa10.38□□□□□ -0.75
Tpm1-215ENSMUST00000113705 Inafm2A0A1L1STD6 152 aa10.37□□□□□ -0.75
Tpm1-215ENSMUST00000113705 Ankrd39Q9D2X0 183 aa10.37□□□□□ -0.75
Tpm1-215ENSMUST00000113705 3110070M22RikQ9DAQ7 118 aa10.37□□□□□ -0.75
Tpm1-215ENSMUST00000113705 A730009L09RikA0A1B0GS82 72 aa10.37□□□□□ -0.75
Tpm1-215ENSMUST00000113705 Ufsp1Q9CZP0 217 aa10.37□□□□□ -0.75
Tpm1-215ENSMUST00000113705 Igkv8-24A0A140T8P5 121 aa10.36□□□□□ -0.75
Tpm1-215ENSMUST00000113705 Rbm7Q9CQT2 265 aaKnown RBP10.36□□□□□ -0.75
Tpm1-215ENSMUST00000113705 Kiaa1109A2AAE1 5005 aa10.36□□□□□ -0.75
Tpm1-215ENSMUST00000113705 Vps13bQ80TY5 3993 aa10.35□□□□□ -0.75
Tpm1-215ENSMUST00000113705 Cited1P97769 203 aa10.34□□□□□ -0.75
Tpm1-215ENSMUST00000113705 Gm5148Q8BGG2 154 aa10.34□□□□□ -0.75
Tpm1-215ENSMUST00000113705 BB014433Q8C5R5 389 aa10.34□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 47.6 ms